FFCP PHASE1:Hg19::chr19:41222998..41223057,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:41222998..41223057,+
|short_description=p1@ITPKC
|description=CAGE_peak_1_at_ITPKC_5end
|association_with_transcript=0bp_to_ENST00000263370,NM_025194,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80271 | |EntrezGene=80271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14897 | |HGNC=14897 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DU7 | |UniProt=Q96DU7 | ||
|association_with_transcript=0bp_to_ENST00000263370,NM_025194,uc002oot.2_5end | |||
|cluster_id=chr19:41222998..41223057,+ | |||
|coexpression_cluster_id=C597 | |||
|description=CAGE_peak_1_at_ITPKC_5end | |||
|id=chr19:41222998..41223057,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.14e-11!43;CL:0000223!5.69e-10!59;CL:0000066!1.97e-09!254;CL:0002368!3.81e-07!13;CL:0000220!6.03e-07!246;CL:0002321!9.69e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.37e-09;42!CL:0002368;2.90e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.74e-11,42;CL:0000223,9.70e-10,58;CL:0000066,3.51e-09,253;CL:0002368,3.72e-07,13;CL:0002321,4.51e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.96e-25!659;UBERON:0000467!8.18e-23!625;UBERON:0000480!2.47e-22!626;UBERON:0000062!6.96e-19!511;UBERON:0004111!2.31e-18!241;UBERON:0000922!1.66e-17!612;UBERON:0002050!1.72e-17!605;UBERON:0005423!1.72e-17!605;UBERON:0000923!2.66e-17!604;UBERON:0005291!2.66e-17!604;UBERON:0006598!2.66e-17!604;UBERON:0002532!2.66e-17!604;UBERON:0000475!5.33e-15!365;UBERON:0000483!1.33e-14!309;UBERON:0000119!5.24e-14!312;UBERON:0000481!1.03e-13!347;UBERON:0000477!6.35e-12!286;UBERON:0000025!1.17e-11!194;UBERON:0003103!4.28e-10!69;UBERON:0007023!7.47e-10!115;UBERON:0004119!1.44e-09!169;UBERON:0000925!1.44e-09!169;UBERON:0006595!1.44e-09!169;UBERON:0002100!2.60e-09!216;UBERON:0009569!2.81e-09!113;UBERON:0000926!5.14e-09!448;UBERON:0004120!5.14e-09!448;UBERON:0006603!5.14e-09!448;UBERON:0005177!7.86e-09!107;UBERON:0000064!1.95e-08!219;UBERON:0003104!3.49e-08!238;UBERON:0009142!3.49e-08!238;UBERON:0003914!1.13e-07!118;UBERON:0000466!2.79e-07!126;UBERON:0007196!8.34e-07!14;UBERON:0001558!8.34e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;2.94e-07;15!UBERON:0001558;2.94e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.66e-18,240;UBERON:0005423,1.38e-17,581;UBERON:0000922,3.55e-17,592;UBERON:0002050,4.40e-15,564;UBERON:0000483,7.66e-15,306;UBERON:0000119,3.09e-14,309;UBERON:0000923,6.28e-14,560;UBERON:0010316,6.28e-14,560;UBERON:0005291,6.28e-14,560;UBERON:0006598,6.28e-14,560;UBERON:0010317,6.28e-14,560;UBERON:0002532,6.28e-14,560;UBERON:0000025,4.07e-11,192;UBERON:0004119,4.59e-10,160;UBERON:0000925,4.59e-10,160;UBERON:0006595,4.59e-10,160;UBERON:0003103,8.44e-10,68;UBERON:0007023,9.45e-10,114;UBERON:0009569,5.07e-09,112;UBERON:0002100,8.26e-09,199;UBERON:0005177,8.22e-08,101;UBERON:0001008,9.05e-08,48;UBERON:0003914,1.92e-07,117;UBERON:0006554,2.00e-07,47;UBERON:0007196,3.62e-07,15;UBERON:0001558,3.62e-07,15;UBERON:0003104,8.25e-07,160;UBERON:0009142,8.25e-07,160 | |||
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| ||
|short_description=p1@ITPKC | |||
}} | }} |
Latest revision as of 02:50, 18 September 2015
Short description: | p1@ITPKC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITPKC_5end |
Coexpression cluster: | C597_CD14_mature_immature_Eosinophils_Mast_embryonic_chorionic |
Association with transcript: | 0bp_to_ENST00000263370, NM_025194, uc002oot.2_5end |
EntrezGene: | ITPKC |
HGNC: | 14897 |
UniProt: | Q96DU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.74e-11 | 42 |
endodermal cell | 9.70e-10 | 58 |
epithelial cell | 3.51e-09 | 253 |
respiratory epithelial cell | 3.72e-07 | 13 |
embryonic cell | 4.51e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 6.66e-18 | 240 |
developing anatomical structure | 1.38e-17 | 581 |
embryo | 3.55e-17 | 592 |
embryonic structure | 4.40e-15 | 564 |
epithelium | 7.66e-15 | 306 |
cell layer | 3.09e-14 | 309 |
germ layer | 6.28e-14 | 560 |
germ layer / neural crest | 6.28e-14 | 560 |
embryonic tissue | 6.28e-14 | 560 |
presumptive structure | 6.28e-14 | 560 |
germ layer / neural crest derived structure | 6.28e-14 | 560 |
epiblast (generic) | 6.28e-14 | 560 |
tube | 4.07e-11 | 192 |
endoderm-derived structure | 4.59e-10 | 160 |
endoderm | 4.59e-10 | 160 |
presumptive endoderm | 4.59e-10 | 160 |
compound organ | 8.44e-10 | 68 |
adult organism | 9.45e-10 | 114 |
subdivision of trunk | 5.07e-09 | 112 |
trunk | 8.26e-09 | 199 |
trunk region element | 8.22e-08 | 101 |
renal system | 9.05e-08 | 48 |
epithelial tube | 1.92e-07 | 117 |
urinary system structure | 2.00e-07 | 47 |
tracheobronchial tree | 3.62e-07 | 15 |
lower respiratory tract | 3.62e-07 | 15 |
mesenchyme | 8.25e-07 | 160 |
entire embryonic mesenchyme | 8.25e-07 | 160 |