FFCP PHASE1:Hg19::chr6:72596604..72596697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt=E7EX08,E7ENC2,E7ERQ1,E9PHR1,C9JNW6,B7Z2Q9,Q3ZCW0,Q86UR5 | |UniProt=E7EX08,E7ENC2,E7ERQ1,E9PHR1,C9JNW6,B7Z2Q9,Q3ZCW0,Q86UR5 | ||
|association_with_transcript=0bp_to_ENST00000346609,ENST00000348717,ENST00000349908,ENST00000350827,ENST00000352008,NM_014989,uc003pga.2_5end | |association_with_transcript=0bp_to_ENST00000346609,ENST00000348717,ENST00000349908,ENST00000350827,ENST00000352008,NM_014989,uc003pga.2_5end | ||
|cluster_id=chr6:72596604..72596697,+ | |||
|coexpression_cluster_id=C118 | |coexpression_cluster_id=C118 | ||
|description=CAGE_peak_1_at_RIMS1_5end | |description=CAGE_peak_1_at_RIMS1_5end | ||
|id=chr6:72596604..72596697,+ | |id=chr6:72596604..72596697,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.23e-18;82!UBERON:0006215;1.68e-11;3!UBERON:0010122;1.39e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.01e-60!57;UBERON:0005068!8.01e-60!57;UBERON:0006241!8.01e-60!57;UBERON:0007135!8.01e-60!57;UBERON:0001017!2.19e-55!82;UBERON:0005743!5.80e-54!86;UBERON:0000073!1.49e-52!94;UBERON:0001016!1.49e-52!94;UBERON:0002616!9.60e-50!59;UBERON:0000955!4.85e-48!69;UBERON:0006238!4.85e-48!69;UBERON:0002780!1.29e-45!41;UBERON:0001890!1.29e-45!41;UBERON:0006240!1.29e-45!41;UBERON:0003080!3.06e-44!42;UBERON:0003075!3.73e-42!86;UBERON:0007284!3.73e-42!86;UBERON:0002020!1.82e-41!34;UBERON:0003528!1.82e-41!34;UBERON:0001893!1.88e-41!34;UBERON:0002346!5.22e-41!90;UBERON:0002791!6.03e-40!33;UBERON:0001869!4.53e-39!32;UBERON:0007023!3.41e-35!115;UBERON:0002619!1.67e-33!22;UBERON:0001950!3.02e-30!20;UBERON:0003056!7.59e-30!61;UBERON:0000956!1.07e-28!25;UBERON:0000203!1.07e-28!25;UBERON:0004121!2.72e-25!169;UBERON:0000924!3.86e-25!173;UBERON:0006601!3.86e-25!173;UBERON:0000033!3.78e-23!123;UBERON:0000153!2.44e-22!129;UBERON:0007811!2.44e-22!129;UBERON:0003076!4.58e-16!15;UBERON:0003057!4.58e-16!15;UBERON:0002420!1.69e-14!9;UBERON:0007245!1.69e-14!9;UBERON:0010009!1.69e-14!9;UBERON:0010011!1.69e-14!9;UBERON:0000454!1.69e-14!9;UBERON:0000025!2.43e-14!194;UBERON:0002308!3.16e-14!9;UBERON:0000125!3.16e-14!9;UBERON:0004732!1.18e-13!13;UBERON:0004733!2.30e-12!12;UBERON:0002028!2.30e-12!12;UBERON:0007277!2.30e-12!12;UBERON:0009663!1.52e-11!7;UBERON:0000200!7.04e-11!6;UBERON:0000475!1.20e-10!365;UBERON:0001871!1.58e-10!7;UBERON:0000064!6.05e-10!219;UBERON:0002021!2.07e-09!5;UBERON:0000349!2.32e-09!5;UBERON:0004111!2.93e-09!241;UBERON:0002298!3.44e-09!8;UBERON:0001872!4.19e-09!5;UBERON:0002680!1.47e-08!9;UBERON:0001895!1.47e-08!9;UBERON:0010092!1.47e-08!9;UBERON:0000483!4.08e-08!309;UBERON:0000119!7.19e-08!312;UBERON:0000369!9.76e-08!4;UBERON:0002435!9.76e-08!4;UBERON:0000204!9.76e-08!4;UBERON:0010082!9.76e-08!4;UBERON:0000477!5.68e-07!286 | |ontology_enrichment_uberon=UBERON:0001049!8.01e-60!57;UBERON:0005068!8.01e-60!57;UBERON:0006241!8.01e-60!57;UBERON:0007135!8.01e-60!57;UBERON:0001017!2.19e-55!82;UBERON:0005743!5.80e-54!86;UBERON:0000073!1.49e-52!94;UBERON:0001016!1.49e-52!94;UBERON:0002616!9.60e-50!59;UBERON:0000955!4.85e-48!69;UBERON:0006238!4.85e-48!69;UBERON:0002780!1.29e-45!41;UBERON:0001890!1.29e-45!41;UBERON:0006240!1.29e-45!41;UBERON:0003080!3.06e-44!42;UBERON:0003075!3.73e-42!86;UBERON:0007284!3.73e-42!86;UBERON:0002020!1.82e-41!34;UBERON:0003528!1.82e-41!34;UBERON:0001893!1.88e-41!34;UBERON:0002346!5.22e-41!90;UBERON:0002791!6.03e-40!33;UBERON:0001869!4.53e-39!32;UBERON:0007023!3.41e-35!115;UBERON:0002619!1.67e-33!22;UBERON:0001950!3.02e-30!20;UBERON:0003056!7.59e-30!61;UBERON:0000956!1.07e-28!25;UBERON:0000203!1.07e-28!25;UBERON:0004121!2.72e-25!169;UBERON:0000924!3.86e-25!173;UBERON:0006601!3.86e-25!173;UBERON:0000033!3.78e-23!123;UBERON:0000153!2.44e-22!129;UBERON:0007811!2.44e-22!129;UBERON:0003076!4.58e-16!15;UBERON:0003057!4.58e-16!15;UBERON:0002420!1.69e-14!9;UBERON:0007245!1.69e-14!9;UBERON:0010009!1.69e-14!9;UBERON:0010011!1.69e-14!9;UBERON:0000454!1.69e-14!9;UBERON:0000025!2.43e-14!194;UBERON:0002308!3.16e-14!9;UBERON:0000125!3.16e-14!9;UBERON:0004732!1.18e-13!13;UBERON:0004733!2.30e-12!12;UBERON:0002028!2.30e-12!12;UBERON:0007277!2.30e-12!12;UBERON:0009663!1.52e-11!7;UBERON:0000200!7.04e-11!6;UBERON:0000475!1.20e-10!365;UBERON:0001871!1.58e-10!7;UBERON:0000064!6.05e-10!219;UBERON:0002021!2.07e-09!5;UBERON:0000349!2.32e-09!5;UBERON:0004111!2.93e-09!241;UBERON:0002298!3.44e-09!8;UBERON:0001872!4.19e-09!5;UBERON:0002680!1.47e-08!9;UBERON:0001895!1.47e-08!9;UBERON:0010092!1.47e-08!9;UBERON:0000483!4.08e-08!309;UBERON:0000119!7.19e-08!312;UBERON:0000369!9.76e-08!4;UBERON:0002435!9.76e-08!4;UBERON:0000204!9.76e-08!4;UBERON:0010082!9.76e-08!4;UBERON:0000477!5.68e-07!286 | ||
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|short_description=p1@RIMS1 | |short_description=p1@RIMS1 | ||
}} | }} |
Latest revision as of 16:24, 19 September 2015
Short description: | p1@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RIMS1_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000346609, ENST00000348717, ENST00000349908, ENST00000350827, ENST00000352008, NM_014989, uc003pga.2_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | E7EX08E7ENC2E7ERQ1E9PHR1C9JNW6B7Z2Q9Q3ZCW0Q86UR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data