FFCP PHASE1:Hg19::chr7:95226025..95226032,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5166 | |EntrezGene=5166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8812 | |HGNC=8812 | ||
|TSSclassifier=strong | |||
|UniProt=A4D1H4,Q16654 | |UniProt=A4D1H4,Q16654 | ||
|association_with_transcript=-100bp_to_NM_002612,uc003uoa.2_5end | |association_with_transcript=-100bp_to_NM_002612,uc003uoa.2_5end | ||
|cluster_id=chr7:95226025..95226032,- | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_37_at_PDK4_5end | |description=CAGE_peak_37_at_PDK4_5end | ||
|id=chr7:95226025..95226032,- | |id=chr7:95226025..95226032,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.64e-13;13!CL:0000945;1.36e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.51e-12,14;CL:0000945,1.31e-07,24;CL:0000826,1.31e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-18!115 | |ontology_enrichment_uberon=UBERON:0007023!1.42e-18!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.62e-41;1!UBERON:0000026;6.62e-41;1!UBERON:0008784;6.62e-41;1!UBERON:0006058;6.62e-41;1!UBERON:0003663;6.62e-41;1!UBERON:0004256;6.62e-41;1!UBERON:0004708;6.62e-41;1!UBERON:0002101;6.62e-41;1!UBERON:0004709;6.62e-41;1!UBERON:0002529;6.62e-41;1!UBERON:0010538;6.62e-41;1!UBERON:0003661;6.62e-41;1!UBERON:0010890;6.62e-41;1!UBERON:0002471;6.62e-41;1!UBERON:0001383;6.62e-41;1!UBERON:0010758;6.62e-41;1!UBERON:0010707;6.62e-41;1!UBERON:0000978;6.62e-41;1!UBERON:0002103;6.62e-41;1!UBERON:0001665;6.62e-41;1!UBERON:0003823;6.62e-41;1!UBERON:0000154;6.62e-41;1!UBERON:0010709;6.62e-41;1!UBERON:0000996;2.21e-40;1!UBERON:0005090;3.11e-21;2!UBERON:0001630;3.11e-21;2!UBERON:0001134;5.28e-11;16!UBERON:0002036;5.28e-11;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,6.62e-41,1;UBERON:0001389,6.62e-41,1;UBERON:0000026,6.62e-41,1;UBERON:0008784,6.62e-41,1;UBERON:0006058,6.62e-41,1;UBERON:0003663,6.62e-41,1;UBERON:0004256,6.62e-41,1;UBERON:0004708,6.62e-41,1;UBERON:0002101,6.62e-41,1;UBERON:0004709,6.62e-41,1;UBERON:0002529,6.62e-41,1;UBERON:0010538,6.62e-41,1;UBERON:0003661,6.62e-41,1;UBERON:0010890,6.62e-41,1;UBERON:0002471,6.62e-41,1;UBERON:0001383,6.62e-41,1;UBERON:0004357,6.62e-41,1;UBERON:0004347,6.62e-41,1;UBERON:0005420,6.62e-41,1;UBERON:0005732,6.62e-41,1;UBERON:0010758,6.62e-41,1;UBERON:0010707,6.62e-41,1;UBERON:0000978,6.62e-41,1;UBERON:0002103,6.62e-41,1;UBERON:0001665,6.62e-41,1;UBERON:0003823,6.62e-41,1;UBERON:0000154,6.62e-41,1;UBERON:0010709,6.62e-41,1;UBERON:0005733,6.62e-41,1;UBERON:0005730,6.62e-41,1;UBERON:0000996,3.30e-40,1;UBERON:0005090,3.11e-21,2;UBERON:0001630,3.11e-21,2 | |||
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| ||
|short_description=p37@PDK4 | |short_description=p37@PDK4 | ||
}} | }} |
Latest revision as of 05:09, 20 September 2015
Short description: | p37@PDK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_PDK4_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -100bp_to_NM_002612, uc003uoa.2_5end |
EntrezGene: | PDK4 |
HGNC: | 8812 |
UniProt: | A4D1H4Q16654 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.51e-12 | 14 |
lymphocyte of B lineage | 1.31e-07 | 24 |
pro-B cell | 1.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 6.62e-41 | 1 |
soleus muscle | 6.62e-41 | 1 |
appendage | 6.62e-41 | 1 |
lower limb segment | 6.62e-41 | 1 |
multi-limb segment region | 6.62e-41 | 1 |
hindlimb muscle | 6.62e-41 | 1 |
hindlimb zeugopod muscle | 6.62e-41 | 1 |
paired limb/fin | 6.62e-41 | 1 |
limb | 6.62e-41 | 1 |
pelvic appendage | 6.62e-41 | 1 |
limb segment | 6.62e-41 | 1 |
paired limb/fin segment | 6.62e-41 | 1 |
limb muscle | 6.62e-41 | 1 |
pelvic complex muscle | 6.62e-41 | 1 |
zeugopod | 6.62e-41 | 1 |
muscle of leg | 6.62e-41 | 1 |
paired limb/fin bud | 6.62e-41 | 1 |
limb bud | 6.62e-41 | 1 |
pelvic appendage bud | 6.62e-41 | 1 |
limb/fin field | 6.62e-41 | 1 |
subdivision of organism along appendicular axis | 6.62e-41 | 1 |
appendage girdle complex | 6.62e-41 | 1 |
leg | 6.62e-41 | 1 |
hindlimb | 6.62e-41 | 1 |
triceps surae | 6.62e-41 | 1 |
hindlimb zeugopod | 6.62e-41 | 1 |
posterior region of body | 6.62e-41 | 1 |
pelvic complex | 6.62e-41 | 1 |
limb field | 6.62e-41 | 1 |
hindlimb/pelvic fin field | 6.62e-41 | 1 |
vagina | 3.30e-40 | 1 |
muscle structure | 3.11e-21 | 2 |
muscle organ | 3.11e-21 | 2 |