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{{UBERON
{{UBERON
|id=UBERON:0000331
|alt_id=UBERON:BTO_0000619-FMA_14956
|name=ileal mucosa
|namespace=
|def="A mucosa that is part of a ileum [Obol]." [OBOL:automatic]
|xref=BTO:0000619;;FMA:14956;;SCTID:85458007
|is_a=UBERON:0000064;;UBERON:0001204
|synonym="Ileal mucous membrane" EXACT [FMA:14956];;"Ileum mucosa" EXACT [FMA:14956];;"ileum mucosa" EXACT [OBOL:automatic];;"ileum mucosa of organ" EXACT [OBOL:automatic];;"ileum mucous membrane" EXACT [OBOL:automatic];;"ileum organ mucosa" EXACT [OBOL:automatic];;"mucosa of ileum" EXACT [OBOL:automatic];;"mucosa of organ of ileum" EXACT [OBOL:automatic];;"mucous membrane of ileum" EXACT [OBOL:automatic];;"organ mucosa of ileum" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=UBERON:BTO_0000619-FMA_14956
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A mucosa that is part of a ileum [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0000331
|is_a=UBERON:0001204
|is_obsolete=
|located_in=
|located_in=
|name=ileal mucosa
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002116
|part_of=UBERON:0002116
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="Ileal mucous membrane" EXACT [FMA:14956];;"Ileum mucosa" EXACT [FMA:14956];;"ileum mucosa" EXACT [OBOL:automatic];;"ileum mucosa of organ" EXACT [OBOL:automatic];;"ileum mucous membrane" EXACT [OBOL:automatic];;"ileum organ mucosa" EXACT [OBOL:automatic];;"mucosa of ileum" EXACT [OBOL:automatic];;"mucosa of organ of ileum" EXACT [OBOL:automatic];;"mucous membrane of ileum" EXACT [OBOL:automatic];;"organ mucosa of ileum" EXACT [OBOL:automatic]
|union_of=
|xref=BTO:0000619;;FMA:14956;;SCTID:85458007
}}
}}

Latest revision as of 17:08, 12 September 2014

Name:ileal mucosa
Namespace:FANTOM
Definition:"A mucosa that is part of a ileum [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000619
FMA:14956

SCTID:85458007
Synonyms: "Ileal mucous membrane" EXACT [FMA:14956]
"Ileum mucosa" EXACT [FMA:14956]
"ileum mucosa" EXACT [OBOL:automatic]
"ileum mucosa of organ" EXACT [OBOL:automatic]
"ileum mucous membrane" EXACT [OBOL:automatic]
"ileum organ mucosa" EXACT [OBOL:automatic]
"mucosa of ileum" EXACT [OBOL:automatic]
"mucosa of organ of ileum" EXACT [OBOL:automatic]
"mucous membrane of ileum" EXACT [OBOL:automatic]
"organ mucosa of ileum" EXACT [OBOL:automatic]
Alt_id: UBERON:BTO_0000619-FMA_14956

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001204(mucosa of small intestine)
part_of:UBERON:0002116(ileum)



Children

is a:FF:0011477 (Ileum epithelium 1h after RANKL),FF:0011479 (Ileum epithelium 3h after RANKL)
part of:UBERON:0008344 (intestinal villus of ileum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000331 (ileal mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr4:5463968..5463972,+#_ed353464c86c25b9dca4c008f6c67f63p@chr4:5463968..5463972, +
1.58e-86FFCP PHASE1:Mm9::chr4:5463968..5463972,+#_ed353464c86c25b9dca4c008f6c67f63p@chr4:5463968..5463972, +
1.58e-86FFCP PHASE1:Mm9::chr16:32477713..32477720,-#_ed353464c86c25b9dca4c008f6c67f63p@chr16:32477713..32477720, -
1.58e-86FFCP PHASE2:Mm9::chr11:43412172..43412177,-#_ed353464c86c25b9dca4c008f6c67f63p@chr11:43412172..43412177, -
1.58e-86FFCP PHASE1:Mm9::chr11:43412172..43412177,-#_ed353464c86c25b9dca4c008f6c67f63p@chr11:43412172..43412177, -
1.58e-86FFCP PHASE2:Mm9::chr16:32477713..32477720,-#_ed353464c86c25b9dca4c008f6c67f63p@chr16:32477713..32477720, -
1.33e-65FFCP PHASE2:Mm9::chr11:43412139..43412149,-#_6630149eb6108ea5b8601faddd2efc47p@chr11:43412139..43412149, -
1.33e-65FFCP PHASE1:Mm9::chr11:43412139..43412149,-#_6630149eb6108ea5b8601faddd2efc47p@chr11:43412139..43412149, -
3.28e-58FFCP PHASE1:Mm9::chr3:80191466..80191470,+#_440e8f315bbcebcdef638282390c3987p@chr3:80191466..80191470, +
3.28e-58FFCP PHASE1:Mm9::chr11:43412215..43412219,-#_440e8f315bbcebcdef638282390c3987p@chr11:43412215..43412219, -
3.28e-58FFCP PHASE2:Mm9::chr15:70621810..70621814,-#_440e8f315bbcebcdef638282390c3987p@chr15:70621810..70621814, -
3.28e-58FFCP PHASE2:Mm9::chr10:127165632..127165636,+#_440e8f315bbcebcdef638282390c3987p@chr10:127165632..127165636, +
3.28e-58FFCP PHASE1:Mm9::chr15:70621810..70621814,-#_440e8f315bbcebcdef638282390c3987p@chr15:70621810..70621814, -
3.28e-58FFCP PHASE2:Mm9::chr5:31350252..31350259,-#_440e8f315bbcebcdef638282390c3987p13@Slc5a6
3.28e-58FFCP PHASE2:Mm9::chr3:80191466..80191470,+#_440e8f315bbcebcdef638282390c3987p@chr3:80191466..80191470, +
3.28e-58FFCP PHASE1:Mm9::chr10:127165632..127165636,+#_440e8f315bbcebcdef638282390c3987p@chr10:127165632..127165636, +
3.28e-58FFCP PHASE1:Mm9::chr5:31350252..31350259,-#_440e8f315bbcebcdef638282390c3987p13@Slc5a6
3.28e-58FFCP PHASE2:Mm9::chr11:43412215..43412219,-#_440e8f315bbcebcdef638282390c3987p@chr11:43412215..43412219, -
4.9e-53FFCP PHASE2:Mm9::chr1:174032230..174032242,+#_50cdcb610ad49b50c1cdc07adcbd1602p@chr1:174032230..174032242, +
4.9e-53FFCP PHASE1:Mm9::chr1:174032230..174032242,+#_50cdcb610ad49b50c1cdc07adcbd1602p@chr1:174032230..174032242, +
1.1e-52FFCP PHASE1:Mm9::chr1:123242799..123242804,-#_1bbc4ef863a4a0d43eea4328049029f2p@chr1:123242799..123242804, -
1.1e-52FFCP PHASE2:Mm9::chr1:123242799..123242804,-#_1bbc4ef863a4a0d43eea4328049029f2p@chr1:123242799..123242804, -
5.51e-52FFCP PHASE2:Mm9::chr9:7692339..7692366,+#_fa34902964108284074aaa87b879b3ddp@chr9:7692339..7692366, +
5.51e-52FFCP PHASE1:Mm9::chr6:48417827..48417837,+#_fa34902964108284074aaa87b879b3ddp@chr6:48417827..48417837, +
5.51e-52FFCP PHASE2:Mm9::chr6:48417827..48417837,+#_fa34902964108284074aaa87b879b3ddp@chr6:48417827..48417837, +
5.51e-52FFCP PHASE1:Mm9::chr9:7692339..7692366,+#_fa34902964108284074aaa87b879b3ddp@chr9:7692339..7692366, +
1.18e-44FFCP PHASE2:Mm9::chr1:174032263..174032278,+#_0f30e89f0a045844f8ed17c840f03465p@chr1:174032263..174032278, +
1.18e-44FFCP PHASE1:Mm9::chr1:174032263..174032278,+#_0f30e89f0a045844f8ed17c840f03465p@chr1:174032263..174032278, +
1.66e-44FFCP PHASE2:Mm9::chr11:76730372..76730376,+#_ef6897b1e9330b2b35e33b5f2fbaec15p@chr11:76730372..76730376, +
1.66e-44FFCP PHASE1:Mm9::chr11:76730372..76730376,+#_ef6897b1e9330b2b35e33b5f2fbaec15p@chr11:76730372..76730376, +
2.33e-44FFCP PHASE1:Mm9::chr19:6114448..6114456,+#_6e5b1482e8bf1ad4d5da0801174f242fp@chr19:6114448..6114456, +
2.33e-44FFCP PHASE2:Mm9::chr3:65610528..65610533,+#_6e5b1482e8bf1ad4d5da0801174f242fp@chr3:65610528..65610533, +
2.33e-44FFCP PHASE1:Mm9::chr3:65610528..65610533,+#_6e5b1482e8bf1ad4d5da0801174f242fp@chr3:65610528..65610533, +
2.33e-44FFCP PHASE2:Mm9::chr19:6114448..6114456,+#_6e5b1482e8bf1ad4d5da0801174f242fp@chr19:6114448..6114456, +
1.7e-39FFCP PHASE1:Mm9::chr3:6169801..6169806,-#_0572b39498cf9cd5c78ff91a1b15d20cp@chr3:6169801..6169806, -
1.7e-39FFCP PHASE2:Mm9::chr3:6169801..6169806,-#_0572b39498cf9cd5c78ff91a1b15d20cp@chr3:6169801..6169806, -
2.66e-39FFCP PHASE2:Mm9::chr19:6112940..6112946,+#_779e9b029dde209d4d10e7132e22ae61p@chr19:6112940..6112946, +
2.66e-39FFCP PHASE1:Mm9::chr19:6112940..6112946,+#_779e9b029dde209d4d10e7132e22ae61p@chr19:6112940..6112946, +
4.15e-39FFCP PHASE2:Mm9::chr5:31350231..31350240,-#_d95f52c505b8e269ec324fbad966ba30p12@Slc5a6
4.15e-39FFCP PHASE1:Mm9::chr5:31350231..31350240,-#_d95f52c505b8e269ec324fbad966ba30p12@Slc5a6
1.17e-38FFCP PHASE2:Mm9::chr11:43412071..43412093,+#_46bceccfb870f7628d008c6a07b3a932p@chr11:43412071..43412093, +
1.17e-38FFCP PHASE1:Mm9::chr11:43412071..43412093,+#_46bceccfb870f7628d008c6a07b3a932p@chr11:43412071..43412093, +
1.56e-38FFCP PHASE2:Mm9::chr3:103636485..103636490,+#_dd4d2ca232d0e6e9d659f5ed6d9b3841p3@Bcl2l15
1.56e-38FFCP PHASE1:Mm9::chr3:103636485..103636490,+#_dd4d2ca232d0e6e9d659f5ed6d9b3841p3@Bcl2l15
3.67e-34FFCP PHASE2:Mm9::chr11:43412170..43412191,+#_bab4d09e77fb3723e10b9a4978a6e5a7p@chr11:43412170..43412191, +
3.67e-34FFCP PHASE1:Mm9::chr11:43412170..43412191,+#_bab4d09e77fb3723e10b9a4978a6e5a7p@chr11:43412170..43412191, +
4.74e-34FFCP PHASE1:Mm9::chr11:43409580..43409591,+#_365c0559e7e72466a2282dbf9abbd3d9p@chr11:43409580..43409591, +
4.74e-34FFCP PHASE2:Mm9::chr11:43409580..43409591,+#_365c0559e7e72466a2282dbf9abbd3d9p@chr11:43409580..43409591, +
6.12e-34FFCP PHASE1:Mm9::chr6:40578587..40578594,+#_257069336abe9ab6546750dfc5a76ea7p4@Mgam
6.12e-34FFCP PHASE2:Mm9::chr6:40578587..40578594,+#_257069336abe9ab6546750dfc5a76ea7p4@Mgam
1.02e-33FFCP PHASE1:Mm9::chr2:72453221..72453226,-#_164b34b4fdcb87e382dd64d769a528adp@chr2:72453221..72453226, -
1.02e-33FFCP PHASE2:Mm9::chr2:72453221..72453226,-#_164b34b4fdcb87e382dd64d769a528adp@chr2:72453221..72453226, -
1.31e-33FFCP PHASE1:Mm9::chr6:78323455..78323458,-#_abc73ad1b26ebc056f3fb7e949a44113p@chr6:78323455..78323458, -
1.31e-33FFCP PHASE2:Mm9::chr19:6112924..6112937,+#_abc73ad1b26ebc056f3fb7e949a44113p@chr19:6112924..6112937, +
1.31e-33FFCP PHASE1:Mm9::chr19:6112924..6112937,+#_abc73ad1b26ebc056f3fb7e949a44113p@chr19:6112924..6112937, +
1.31e-33FFCP PHASE2:Mm9::chr6:78323455..78323458,-#_abc73ad1b26ebc056f3fb7e949a44113p@chr6:78323455..78323458, -
2.89e-30FFCP PHASE1:Mm9::chr4:138388796..138388811,+#_e7de161ca20820f326cc6334c4dc149ap3@ENSMUST00000147728
2.89e-30FFCP PHASE2:Mm9::chr4:138388796..138388811,+#_e7de161ca20820f326cc6334c4dc149ap3@ENSMUST00000147728
4.03e-30FFCP PHASE1:Mm9::chr10:128109355..128109365,-#_477b778b16dce78e7ba9531d810c7419p@chr10:128109355..128109365, -
4.03e-30FFCP PHASE1:Mm9::chr17:34484746..34484750,+#_477b778b16dce78e7ba9531d810c7419p@chr17:34484746..34484750, +
4.03e-30FFCP PHASE2:Mm9::chr10:128109355..128109365,-#_477b778b16dce78e7ba9531d810c7419p@chr10:128109355..128109365, -
4.03e-30FFCP PHASE2:Mm9::chr17:34484746..34484750,+#_477b778b16dce78e7ba9531d810c7419p@chr17:34484746..34484750, +
5.61e-30FFCP PHASE2:Mm9::chr18:55496010..55496011,-#_416531ab340624ed6668aaf319f57ebdp@chr18:55496010..55496011, -
5.61e-30FFCP PHASE2:Mm9::chr13:17402712..17402716,+#_416531ab340624ed6668aaf319f57ebdp@chr13:17402712..17402716, +
5.61e-30FFCP PHASE2:Mm9::chr12:103615373..103615374,+#_416531ab340624ed6668aaf319f57ebdp@chr12:103615373..103615374, +
5.61e-30FFCP PHASE2:Mm9::chrX:83991903..83991905,-#_416531ab340624ed6668aaf319f57ebdp@chrX:83991903..83991905, -
5.61e-30FFCP PHASE1:Mm9::chr13:17402712..17402716,+#_416531ab340624ed6668aaf319f57ebdp@chr13:17402712..17402716, +
5.61e-30FFCP PHASE1:Mm9::chr8:27020687..27020691,+#_416531ab340624ed6668aaf319f57ebdp@chr8:27020687..27020691, +
5.61e-30FFCP PHASE2:Mm9::chr11:9039303..9039304,+#_416531ab340624ed6668aaf319f57ebdp@chr11:9039303..9039304, +
5.61e-30FFCP PHASE2:Mm9::chr17:4030939..4030944,-#_416531ab340624ed6668aaf319f57ebdp@chr17:4030939..4030944, -
5.61e-30FFCP PHASE2:Mm9::chr18:58306021..58306022,+#_416531ab340624ed6668aaf319f57ebdp@chr18:58306021..58306022, +
5.61e-30FFCP PHASE1:Mm9::chrX:68120720..68120723,-#_416531ab340624ed6668aaf319f57ebdp@chrX:68120720..68120723, -
5.61e-30FFCP PHASE1:Mm9::chr10:31111154..31111155,+#_416531ab340624ed6668aaf319f57ebdp@chr10:31111154..31111155, +
5.61e-30FFCP PHASE1:Mm9::chr12:103615373..103615374,+#_416531ab340624ed6668aaf319f57ebdp@chr12:103615373..103615374, +
5.61e-30FFCP PHASE1:Mm9::chr4:72564746..72564750,-#_416531ab340624ed6668aaf319f57ebdp@chr4:72564746..72564750, -
5.61e-30FFCP PHASE1:Mm9::chr11:106410939..106410940,+#_416531ab340624ed6668aaf319f57ebdp@chr11:106410939..106410940, +
5.61e-30FFCP PHASE2:Mm9::chr3:20879214..20879216,+#_416531ab340624ed6668aaf319f57ebdp@chr3:20879214..20879216, +
5.61e-30FFCP PHASE1:Mm9::chr18:55496010..55496011,-#_416531ab340624ed6668aaf319f57ebdp@chr18:55496010..55496011, -
5.61e-30FFCP PHASE2:Mm9::chr4:72564746..72564750,-#_416531ab340624ed6668aaf319f57ebdp@chr4:72564746..72564750, -
5.61e-30FFCP PHASE1:Mm9::chr17:43614030..43614038,+#_416531ab340624ed6668aaf319f57ebdp@chr17:43614030..43614038, +
5.61e-30FFCP PHASE2:Mm9::chrX:68120720..68120723,-#_416531ab340624ed6668aaf319f57ebdp@chrX:68120720..68120723, -
5.61e-30FFCP PHASE1:Mm9::chr11:27472982..27472983,+#_416531ab340624ed6668aaf319f57ebdp@chr11:27472982..27472983, +
5.61e-30FFCP PHASE1:Mm9::chr1:40187318..40187321,-#_416531ab340624ed6668aaf319f57ebdp@chr1:40187318..40187321, -
5.61e-30FFCP PHASE1:Mm9::chr9:50047835..50047836,+#_416531ab340624ed6668aaf319f57ebdp@chr9:50047835..50047836, +
5.61e-30FFCP PHASE1:Mm9::chrX:83991903..83991905,-#_416531ab340624ed6668aaf319f57ebdp@chrX:83991903..83991905, -
5.61e-30FFCP PHASE2:Mm9::chr17:43614030..43614038,+#_416531ab340624ed6668aaf319f57ebdp@chr17:43614030..43614038, +
5.61e-30FFCP PHASE2:Mm9::chr1:40187318..40187321,-#_416531ab340624ed6668aaf319f57ebdp@chr1:40187318..40187321, -
5.61e-30FFCP PHASE2:Mm9::chr11:106410939..106410940,+#_416531ab340624ed6668aaf319f57ebdp@chr11:106410939..106410940, +
5.61e-30FFCP PHASE1:Mm9::chr3:20879214..20879216,+#_416531ab340624ed6668aaf319f57ebdp@chr3:20879214..20879216, +
5.61e-30FFCP PHASE2:Mm9::chr10:31111154..31111155,+#_416531ab340624ed6668aaf319f57ebdp@chr10:31111154..31111155, +
5.61e-30FFCP PHASE1:Mm9::chr13:55874724..55874725,-#_416531ab340624ed6668aaf319f57ebdp@chr13:55874724..55874725, -
5.61e-30FFCP PHASE2:Mm9::chr13:55874724..55874725,-#_416531ab340624ed6668aaf319f57ebdp@chr13:55874724..55874725, -
5.61e-30FFCP PHASE2:Mm9::chr8:5085607..5085611,-#_416531ab340624ed6668aaf319f57ebdp@chr8:5085607..5085611, -
5.61e-30FFCP PHASE1:Mm9::chr18:58306021..58306022,+#_416531ab340624ed6668aaf319f57ebdp@chr18:58306021..58306022, +
5.61e-30FFCP PHASE2:Mm9::chr9:50047835..50047836,+#_416531ab340624ed6668aaf319f57ebdp@chr9:50047835..50047836, +
5.61e-30FFCP PHASE1:Mm9::chr11:9039303..9039304,+#_416531ab340624ed6668aaf319f57ebdp@chr11:9039303..9039304, +
5.61e-30FFCP PHASE2:Mm9::chr8:27020687..27020691,+#_416531ab340624ed6668aaf319f57ebdp@chr8:27020687..27020691, +
5.61e-30FFCP PHASE2:Mm9::chr11:27472982..27472983,+#_416531ab340624ed6668aaf319f57ebdp@chr11:27472982..27472983, +
5.61e-30FFCP PHASE1:Mm9::chr8:5085607..5085611,-#_416531ab340624ed6668aaf319f57ebdp@chr8:5085607..5085611, -
5.61e-30FFCP PHASE1:Mm9::chr17:4030939..4030944,-#_416531ab340624ed6668aaf319f57ebdp@chr17:4030939..4030944, -

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