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{{CL
{{CL
|id=CL:0000622
|alt_id=
|name=acinar cell
|namespace=efo
|def="A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de]
|xref=FMA:83625
|is_a=CL:0000150;;CL:0000151;;CL:0000154;;EFO:0002966
|synonym="acinic cell" EXACT [];;"acinous cell" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000622
|is_a=CL:0000150 ;;CL:0000154
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=acinar cell
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|namespace=FANTOM
|is_obsolete=
|obo_creation_date=
|part_of=UBERON:0009842
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|subset=
|synonym="acinic cell" EXACT [];;"acinous cell" EXACT []
|union_of=
|xref=FMA:83625
}}
}}

Latest revision as of 16:35, 12 September 2014

Name:acinar cell
Namespace:FANTOM
Definition:"A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus)." [GOC:tfm, http://www.copewithcytokines.de]
Xrefs:
links:
FMA:83625
Synonyms: "acinic cell" EXACT []
"acinous cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000150(glandular epithelial cell),CL:0000154(protein secreting cell)
part_of:UBERON:0009842(acinus)



Children


is a:CL:0002140 (acinar cell of sebaceous gland),CL:0002623 (acinar cell of salivary gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000622 (acinar cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
7.76e-118FFCP PHASE2:Hg19::chr5:66942627..66942643,-#_3aeb0903a8426315e200e65fc06af76fp1@ENST00000507298
7.76e-118FFCP PHASE1:Hg19::chr5:66942627..66942643,-#_3aeb0903a8426315e200e65fc06af76fp1@ENST00000507298
7.76e-118FFCP PHASE2:Hg19::chr6:25004699..25004706,-#_3aeb0903a8426315e200e65fc06af76fp@chr6:25004699..25004706, -
7.76e-118FFCP PHASE1:Hg19::chr6:25004699..25004706,-#_3aeb0903a8426315e200e65fc06af76fp@chr6:25004699..25004706, -
6.64e-89FFCP PHASE2:Hg19::chr6:25004760..25004769,-#_3aa59dc2b2caffaaa7c4544013fe9e02p@chr6:25004760..25004769, -
6.64e-89FFCP PHASE1:Hg19::chr6:25004760..25004769,-#_3aa59dc2b2caffaaa7c4544013fe9e02p@chr6:25004760..25004769, -
6.64e-89FFCP PHASE2:Hg19::chr6:25004888..25004899,-#_3aa59dc2b2caffaaa7c4544013fe9e02p@chr6:25004888..25004899, -
6.64e-89FFCP PHASE1:Hg19::chr6:25004888..25004899,-#_3aa59dc2b2caffaaa7c4544013fe9e02p@chr6:25004888..25004899, -
1.64e-88FFCP PHASE2:Hg19::chr12:966094..966103,+#_0dfcb820e9dd29d5cb24b88cabb1d24fp@chr12:966094..966103, +
1.64e-88FFCP PHASE1:Hg19::chr12:966094..966103,+#_0dfcb820e9dd29d5cb24b88cabb1d24fp@chr12:966094..966103, +
3.49e-79FFCP PHASE2:Hg19::chr3:48471830..48471839,-#_cfd9904b1e70c7ca3b6c91a117e37db0p27@PLXNB1
3.49e-79FFCP PHASE1:Hg19::chr3:48471830..48471839,-#_cfd9904b1e70c7ca3b6c91a117e37db0p27@PLXNB1
1.56e-71FFCP PHASE2:Hg19::chr6:25004791..25004799,-#_5bfe441feb19a7c4e5da38f06c888c48p@chr6:25004791..25004799, -
1.56e-71FFCP PHASE1:Hg19::chr6:25004791..25004799,-#_5bfe441feb19a7c4e5da38f06c888c48p@chr6:25004791..25004799, -
3.1e-70FFCP PHASE2:Hg19::chr15:95334390..95334402,-#_f3866eea505da2b22cae47baa1b1e630p@chr15:95334390..95334402, -
3.1e-70FFCP PHASE1:Hg19::chr15:95334390..95334402,-#_f3866eea505da2b22cae47baa1b1e630p@chr15:95334390..95334402, -
5.29e-70FFCP PHASE1:Hg19::chr10:47740297..47740299,+#_310b35c9379eee5d134a30ac2bf67255p1@FAM25HP
5.29e-70FFCP PHASE2:Hg19::chr10:47740297..47740299,+#_310b35c9379eee5d134a30ac2bf67255p1@FAM25HP
2.17e-63FFCP PHASE2:Hg19::chr17:38978586..38978620,-#_5d0c56e07ca6783574d85a03b065667cp5@KRT10
2.17e-63FFCP PHASE1:Hg19::chr17:38978586..38978620,-#_5d0c56e07ca6783574d85a03b065667cp5@KRT10
6.03e-60FFCP PHASE2:Hg19::chr6:25004678..25004688,-#_35ad16902effc7812ee94135d1b29015p@chr6:25004678..25004688, -
6.03e-60FFCP PHASE1:Hg19::chr6:25004678..25004688,-#_35ad16902effc7812ee94135d1b29015p@chr6:25004678..25004688, -
1.1e-59FFCP PHASE1:Hg19::chr12:52912957..52912973,-#_bfbe8eff7edca4d94531bb60c57f5902p17@KRT5
1.1e-59FFCP PHASE2:Hg19::chr12:52912957..52912973,-#_bfbe8eff7edca4d94531bb60c57f5902p17@KRT5
8.66e-58FFCP PHASE2:Hg19::chr17:38978257..38978272,-#_51f46807c751ce657f259c66bfd5ff58p6@KRT10
8.66e-58FFCP PHASE1:Hg19::chr17:38978257..38978272,-#_51f46807c751ce657f259c66bfd5ff58p6@KRT10
1.16e-57FFCP PHASE2:Hg19::chr17:38976838..38976861,-#_fd5fa5a957f42ddaf34faeee2a681a1ep@chr17:38976838..38976861, -
1.16e-57FFCP PHASE1:Hg19::chr17:38976838..38976861,-#_fd5fa5a957f42ddaf34faeee2a681a1ep@chr17:38976838..38976861, -
2.19e-53FFCP PHASE2:Hg19::chr7:7604061..7604072,-#_7fee23b4cee9e44033f3008794b1976cp@chr7:7604061..7604072, -
2.19e-53FFCP PHASE1:Hg19::chr7:7604061..7604072,-#_7fee23b4cee9e44033f3008794b1976cp@chr7:7604061..7604072, -
4.63e-53FFCP PHASE1:Hg19::chr10:105830210..105830215,-#_be0f6f144b2916ce389ed6686ba62768p@chr10:105830210..105830215, -
4.63e-53FFCP PHASE2:Hg19::chr10:105830210..105830215,-#_be0f6f144b2916ce389ed6686ba62768p@chr10:105830210..105830215, -
1.37e-51FFCP PHASE2:Hg19::chr20:3295706..3295717,-#_59ed437f260fbbba35bf616ff7cbffc5p@chr20:3295706..3295717, -
1.37e-51FFCP PHASE1:Hg19::chr20:3295706..3295717,-#_59ed437f260fbbba35bf616ff7cbffc5p@chr20:3295706..3295717, -
1.37e-51FFCP PHASE2:Hg19::chr6:56488575..56488587,-#_59ed437f260fbbba35bf616ff7cbffc5p@chr6:56488575..56488587, -
1.37e-51FFCP PHASE1:Hg19::chr6:56488575..56488587,-#_59ed437f260fbbba35bf616ff7cbffc5p@chr6:56488575..56488587, -
1.94e-51FFCP PHASE1:Hg19::chr17:38978519..38978529,-#_9dddf8becce29017fad09cfd0f78370ap9@KRT10
1.94e-51FFCP PHASE2:Hg19::chr17:38978519..38978529,-#_9dddf8becce29017fad09cfd0f78370ap9@KRT10
2.73e-51FFCP PHASE2:Hg19::chr17:38978422..38978432,-#_9dbb99458bca03cbe22ef45aeb3b7f77p12@KRT10
2.73e-51FFCP PHASE1:Hg19::chr17:38978422..38978432,-#_9dbb99458bca03cbe22ef45aeb3b7f77p12@KRT10
9.94e-45FFCP PHASE2:Hg19::chr2:19428508..19428522,-#_21e0296c8febc711ce551d652863dc00p@chr2:19428508..19428522, -
9.94e-45FFCP PHASE1:Hg19::chr2:19428508..19428522,-#_21e0296c8febc711ce551d652863dc00p@chr2:19428508..19428522, -
1.31e-43FFCP PHASE1:Hg19::chr10:118187381..118187397,+#_d1bad2fa7c54d7909354457be015ad17p3@PNLIPRP3
1.31e-43FFCP PHASE2:Hg19::chr10:118187381..118187397,+#_d1bad2fa7c54d7909354457be015ad17p3@PNLIPRP3
8.62e-43FFCP PHASE2:Hg19::chr1:153044083..153044088,-#_2a56d14602196b68b958c37dff06ebf0p1@SPRR2B
8.62e-43FFCP PHASE1:Hg19::chr1:153044083..153044088,-#_2a56d14602196b68b958c37dff06ebf0p1@SPRR2B
1.32e-42FFCP PHASE1:Hg19::chr10:102981544..102981563,+#_d2c962a99da13b363805cdf23da45a25p@chr10:102981544..102981563, +
1.32e-42FFCP PHASE2:Hg19::chr10:102981544..102981563,+#_d2c962a99da13b363805cdf23da45a25p@chr10:102981544..102981563, +
1.3e-40FFCP PHASE1:Hg19::chr13:43059605..43059611,+#_91bbee9e4beb7e500f2f2d7062963e3bp@chr13:43059605..43059611, +
1.3e-40FFCP PHASE2:Hg19::chr13:43059605..43059611,+#_91bbee9e4beb7e500f2f2d7062963e3bp@chr13:43059605..43059611, +
1.3e-40FFCP PHASE2:Hg19::chr6:25004775..25004790,-#_91bbee9e4beb7e500f2f2d7062963e3bp@chr6:25004775..25004790, -
1.3e-40FFCP PHASE1:Hg19::chr6:25004775..25004790,-#_91bbee9e4beb7e500f2f2d7062963e3bp@chr6:25004775..25004790, -
1.48e-40FFCP PHASE2:Hg19::chr17:38977367..38977371,-#_79a27503c8b9ee93c473e83d7e1ad66ap@chr17:38977367..38977371, -
1.48e-40FFCP PHASE1:Hg19::chr11:86285462..86285463,-#_79a27503c8b9ee93c473e83d7e1ad66ap@chr11:86285462..86285463, -
1.48e-40FFCP PHASE1:Hg19::chr17:38977367..38977371,-#_79a27503c8b9ee93c473e83d7e1ad66ap@chr17:38977367..38977371, -
1.48e-40FFCP PHASE2:Hg19::chr17:38975839..38975846,-#_79a27503c8b9ee93c473e83d7e1ad66ap14@KRT10
1.48e-40FFCP PHASE2:Hg19::chr11:86285462..86285463,-#_79a27503c8b9ee93c473e83d7e1ad66ap@chr11:86285462..86285463, -
1.48e-40FFCP PHASE2:Hg19::chr17:38978288..38978293,-#_79a27503c8b9ee93c473e83d7e1ad66ap21@KRT10
1.48e-40FFCP PHASE1:Hg19::chr17:38975839..38975846,-#_79a27503c8b9ee93c473e83d7e1ad66ap14@KRT10
1.48e-40FFCP PHASE1:Hg19::chr17:38978288..38978293,-#_79a27503c8b9ee93c473e83d7e1ad66ap21@KRT10
1.48e-40FFCP PHASE2:Hg19::chr20:3295742..3295749,-#_79a27503c8b9ee93c473e83d7e1ad66ap@chr20:3295742..3295749, -
1.48e-40FFCP PHASE1:Hg19::chr20:3295742..3295749,-#_79a27503c8b9ee93c473e83d7e1ad66ap@chr20:3295742..3295749, -
1.95e-40FFCP PHASE1:Hg19::chr12:3600112..3600125,+#_59b2094f3a15385bb30b1efe0244f43bp6@PRMT8
1.95e-40FFCP PHASE2:Hg19::chr12:3600112..3600125,+#_59b2094f3a15385bb30b1efe0244f43bp6@PRMT8
2.23e-40FFCP PHASE2:Hg19::chr17:38976601..38976615,-#_8857bc329530913739eb31768fd971edp@chr17:38976601..38976615, -
2.23e-40FFCP PHASE1:Hg19::chr17:38976601..38976615,-#_8857bc329530913739eb31768fd971edp@chr17:38976601..38976615, -
2.71e-40FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_68015ee5fc0faa07a256312ba76ab382p2@PGLYRP4
2.71e-40FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_68015ee5fc0faa07a256312ba76ab382p2@PGLYRP4
2.71e-40FFCP PHASE2:Hg19::chr3:140961094..140961103,+#_68015ee5fc0faa07a256312ba76ab382p@chr3:140961094..140961103, +
2.71e-40FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_68015ee5fc0faa07a256312ba76ab382p@chr17:38976882..38976895, -
2.71e-40FFCP PHASE1:Hg19::chr3:140961094..140961103,+#_68015ee5fc0faa07a256312ba76ab382p@chr3:140961094..140961103, +
2.71e-40FFCP PHASE1:Hg19::chr17:38976882..38976895,-#_68015ee5fc0faa07a256312ba76ab382p@chr17:38976882..38976895, -
3.31e-40FFCP PHASE1:Hg19::chrY:7671916..7671924,-#_95ee9a3d8709ab914eefea770e3af7abp@chrY:7671916..7671924, -
3.31e-40FFCP PHASE2:Hg19::chrY:7671916..7671924,-#_95ee9a3d8709ab914eefea770e3af7abp@chrY:7671916..7671924, -
3.33e-40FFCP PHASE2:Hg19::chr17:38978621..38978636,-#_78fe83f89bb42cc173d501ebbc9e3a30p8@KRT10
3.33e-40FFCP PHASE1:Hg19::chr17:38978621..38978636,-#_78fe83f89bb42cc173d501ebbc9e3a30p8@KRT10
4.98e-40FFCP PHASE1:Hg19::chr17:38976811..38976823,-#_3a361658ae03511a3a99effcde38fd88p@chr17:38976811..38976823, -
4.98e-40FFCP PHASE2:Hg19::chr17:38976811..38976823,-#_3a361658ae03511a3a99effcde38fd88p@chr17:38976811..38976823, -
9.66e-40FFCP PHASE1:Hg19::chr1:152943122..152943128,+#_4fdfaec3117b7b62a795a8f0062b6087p1@SPRR4
9.66e-40FFCP PHASE2:Hg19::chr1:152943122..152943128,+#_4fdfaec3117b7b62a795a8f0062b6087p1@SPRR4
1.27e-39FFCP PHASE2:Hg19::chr17:38984452..38984467,+#_0f0c5f8d5594b7d6304ce9d45e3b8acap@chr17:38984452..38984467, +
1.27e-39FFCP PHASE1:Hg19::chr17:38984452..38984467,+#_0f0c5f8d5594b7d6304ce9d45e3b8acap@chr17:38984452..38984467, +
1.58e-39FFCP PHASE2:Hg19::chr2:131669765..131669776,+#_418b1e3e7760017af729f388a514dfb1p@chr2:131669765..131669776, +
1.58e-39FFCP PHASE1:Hg19::chr2:131669765..131669776,+#_418b1e3e7760017af729f388a514dfb1p@chr2:131669765..131669776, +
1.98e-38FFCP PHASE2:Hg19::chr17:39742637..39742657,-#_1c8da2154f8fa2015659edc7896b03f9p3@BC127260
1.98e-38FFCP PHASE1:Hg19::chr17:39742637..39742657,-#_1c8da2154f8fa2015659edc7896b03f9p3@BC127260
2.23e-37FFCP PHASE2:Hg19::chr17:73753308..73753323,+#_731de084cffffa683d0bf2e9d4642593p@chr17:73753308..73753323, +
2.23e-37FFCP PHASE1:Hg19::chr17:73753308..73753323,+#_731de084cffffa683d0bf2e9d4642593p@chr17:73753308..73753323, +
4.68e-37FFCP PHASE2:Hg19::chr5:159849211..159849231,+#_f79d220aad18bc68800d390bde724350p5@PTTG1
4.68e-37FFCP PHASE1:Hg19::chr5:159849211..159849231,+#_f79d220aad18bc68800d390bde724350p5@PTTG1
1.57e-36FFCP PHASE2:Hg19::chr1:197657822..197657832,+#_49dab3b70c9f47c6efa461f7bd3c4694p1@EEF1A1P32
1.57e-36FFCP PHASE1:Hg19::chr1:197657822..197657832,+#_49dab3b70c9f47c6efa461f7bd3c4694p1@EEF1A1P32
1.66e-36FFCP PHASE1:Hg19::chr1:2360073..2360082,+#_ccef37d6070609de6f592eaab974a40bp@chr1:2360073..2360082, +
1.66e-36FFCP PHASE2:Hg19::chr1:2360073..2360082,+#_ccef37d6070609de6f592eaab974a40bp@chr1:2360073..2360082, +
2.88e-36FFCP PHASE1:Hg19::chr1:152769195..152769200,+#_857c99a923b19c309cb435ba1d8d55c1p1@LCE1D
2.88e-36FFCP PHASE2:Hg19::chr1:152769195..152769200,+#_857c99a923b19c309cb435ba1d8d55c1p1@LCE1D
3.66e-36FFCP PHASE2:Hg19::chr17:38652332..38652344,-#_d2504a56bc9002a35cd63e62158b3676p18@TNS4
3.66e-36FFCP PHASE1:Hg19::chr17:38652332..38652344,-#_d2504a56bc9002a35cd63e62158b3676p18@TNS4
8.06e-36FFCP PHASE2:Hg19::chr1:152798501..152798507,+#_29ea003e39c20297cf16fa681a2f0090p1@LCE1A
8.06e-36FFCP PHASE1:Hg19::chr1:152798501..152798507,+#_29ea003e39c20297cf16fa681a2f0090p1@LCE1A

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