FFCP PHASE1:Hg19::chr11:118175629..118175656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=916 | |EntrezGene=916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1674 | |HGNC=1674 | ||
|TSSclassifier=strong | |||
|UniProt=E9PSH8 | |UniProt=E9PSH8 | ||
|association_with_transcript=15bp_to_ENST00000528600_5end | |association_with_transcript=15bp_to_ENST00000528600_5end | ||
|cluster_id=chr11:118175629..118175656,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_4_at_CD3E_5end | |description=CAGE_peak_4_at_CD3E_5end | ||
|id=chr11:118175629..118175656,+ | |id=chr11:118175629..118175656,+ | ||
|ontology_enrichment_celltype=CL:0000084;8.75e-58;25!CL:0000791;3.65e-54;18!CL:0000789;3.65e-54;18!CL:0002419;3.65e-54;18!CL:0000625;1.33e-33;11!CL:0000624;3.43e-19;6!CL:0000542;2.65e-17;53!CL:0000898;8.25e-11;3!CL:0000623;1.83e-10;3!CL:0000226;1.23e-09;3!CL:0000842;1.23e-09;3!CL:0000815;7.44e-08;2!CL:0000792;7.44e-08;2!CL:0002677;7.44e-08;2!CL:0002087;3.18e-07;104 | |ontology_enrichment_celltype=CL:0000084!1.25e-36!25;CL:0000827!1.25e-36!25;CL:0000791!7.36e-35!18;CL:0000789!7.36e-35!18;CL:0002420!7.36e-35!18;CL:0002419!7.36e-35!18;CL:0000790!7.36e-35!18;CL:0000625!6.38e-22!11;CL:0000838!5.40e-19!52;CL:0000542!1.72e-18!53;CL:0000051!1.72e-18!53;CL:0000738!2.67e-17!140;CL:0002087!9.71e-17!119;CL:0000037!2.84e-13!172;CL:0000566!2.84e-13!172;CL:0000624!9.89e-13!6;CL:0002031!1.18e-12!124;CL:0000988!7.31e-12!182;CL:0002032!4.94e-11!165;CL:0000837!4.94e-11!165;CL:0000898!1.89e-07!3;CL:0000623!3.67e-07!3;CL:0000825!3.67e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000084;8.75e-58;25!CL:0000791;3.65e-54;18!CL:0000789;3.65e-54;18!CL:0002419;3.65e-54;18!CL:0000625;1.33e-33;11!CL:0000624;3.43e-19;6!CL:0000542;2.65e-17;53!CL:0000898;8.25e-11;3!CL:0000623;1.83e-10;3!CL:0000226;1.23e-09;3!CL:0000842;1.23e-09;3!CL:0000815;7.44e-08;2!CL:0000792;7.44e-08;2!CL:0002677;7.44e-08;2!CL:0002087;3.18e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.83e-58,25;CL:0000827,7.83e-58,25;CL:0000791,3.11e-54,18;CL:0000789,3.11e-54,18;CL:0002420,3.11e-54,18;CL:0002419,3.11e-54,18;CL:0000790,3.11e-54,18;CL:0000625,1.02e-33,11;CL:0000838,1.04e-32,52;CL:0000542,5.81e-32,53;CL:0000051,5.81e-32,53;CL:0002087,8.09e-20,115;CL:0000624,3.54e-19,6;CL:0000738,3.99e-18,136;CL:0002031,1.00e-14,120;CL:0000037,4.26e-13,168;CL:0000988,5.10e-12,177;CL:0000898,7.48e-11,3;CL:0000623,2.12e-10,3;CL:0000825,2.12e-10,3;CL:0002032,4.27e-10,161;CL:0000837,4.27e-10,161;CL:0000226,1.23e-09,3;CL:0000842,1.23e-09,3;CL:0000815,7.07e-08,2;CL:0000792,7.07e-08,2;CL:0002677,7.07e-08,2;CL:0000893,1.72e-07,2;CL:0002489,1.72e-07,2;CL:0000809,1.72e-07,2;CL:0000808,1.72e-07,2;CL:0000894,1.72e-07,2;CL:0000806,1.72e-07,2;CL:0000807,1.72e-07,2;CL:0000805,1.72e-07,2;CL:0002425,1.72e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.65e-54;18!CL:0000051;2.65e-17;53!CL:0002425;1.67e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;1.23e-21;15!UBERON:0000179;1.23e-21;15!UBERON:0000463;1.23e-21;15!UBERON:0002390;1.15e-11;32!UBERON:0002193;1.80e-09;42!UBERON:0002370;1.11e-07;2!UBERON:0005058;1.11e-07;2!UBERON:0009113;1.11e-07;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.95e-16!15;UBERON:0000179!1.95e-16!15;UBERON:0000463!1.95e-16!15;UBERON:0004177!2.73e-10!7;UBERON:0002193!2.56e-09!112;UBERON:0002390!2.85e-09!102;UBERON:0003061!2.85e-09!102;UBERON:0002370!3.99e-09!4;UBERON:0005058!3.99e-09!4;UBERON:0009113!3.99e-09!4;UBERON:0003295!3.99e-09!4;UBERON:0005562!3.99e-09!4;UBERON:0007023!7.48e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.23e-21;15!UBERON:0000179;1.23e-21;15!UBERON:0000463;1.23e-21;15!UBERON:0002390;1.15e-11;32!UBERON:0002193;1.80e-09;42!UBERON:0002370;1.11e-07;2!UBERON:0005058;1.11e-07;2!UBERON:0009113;1.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-21,15;UBERON:0000179,1.10e-21,15;UBERON:0000463,1.10e-21,15;UBERON:0002370,1.73e-13,4;UBERON:0005058,1.73e-13,4;UBERON:0009113,1.73e-13,4;UBERON:0003295,1.73e-13,4;UBERON:0005562,1.73e-13,4;UBERON:0003351,5.35e-09,6;UBERON:0001042,7.60e-08,10;UBERON:0009145,7.60e-08,10;UBERON:0004177,1.04e-07,7;UBERON:0005057,1.04e-07,7;UBERON:0006562,4.24e-07,11;UBERON:0002193,5.13e-07,108 | |||
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| ||
|short_description=p4@CD3E | |short_description=p4@CD3E | ||
}} | }} |
Latest revision as of 23:44, 15 September 2015
Short description: | p4@CD3E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD3E_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 15bp_to_ENST00000528600_5end |
EntrezGene: | CD3E |
HGNC: | 1674 |
UniProt: | E9PSH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-21 | 15 |
haemolymphatic fluid | 1.10e-21 | 15 |
organism substance | 1.10e-21 | 15 |
thymus | 1.73e-13 | 4 |
hemolymphoid system gland | 1.73e-13 | 4 |
thymic region | 1.73e-13 | 4 |
pharyngeal gland | 1.73e-13 | 4 |
thymus primordium | 1.73e-13 | 4 |
pharyngeal epithelium | 5.35e-09 | 6 |
chordate pharynx | 7.60e-08 | 10 |
pharyngeal region of foregut | 7.60e-08 | 10 |
hemopoietic organ | 1.04e-07 | 7 |
immune organ | 1.04e-07 | 7 |
pharynx | 4.24e-07 | 11 |
hemolymphoid system | 5.13e-07 | 108 |