FFCP PHASE1:Hg19::chr12:57735443..57735464,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22864 | |EntrezGene=22864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29167 | |HGNC=29167 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCG9 | |UniProt=B5MCG9 | ||
|association_with_transcript=-178bp_to_ENST00000403821_5end | |association_with_transcript=-178bp_to_ENST00000403821_5end | ||
|cluster_id=chr12:57735443..57735464,- | |||
|coexpression_cluster_id=C257 | |coexpression_cluster_id=C257 | ||
|description=CAGE_peak_18_at_R3HDM2_5end | |description=CAGE_peak_18_at_R3HDM2_5end | ||
|id=chr12:57735443..57735464,- | |id=chr12:57735443..57735464,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.81e-13;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001950;8.84e-58;20!UBERON:0002619;1.12e-52;22!UBERON:0001869;6.54e-48;32!UBERON:0001893;2.63e-47;34!UBERON:0000956;1.73e-46;25!UBERON:0000203;1.73e-46;25!UBERON:0003528;3.66e-40;34!UBERON:0002020;3.66e-40;34!UBERON:0002791;1.49e-39;32!UBERON:0002780;1.56e-36;41!UBERON:0001890;1.56e-36;41!UBERON:0000200;3.37e-33;6!UBERON:0001905;2.30e-26;2!UBERON:0002757;2.30e-26;2!UBERON:0010134;2.30e-26;2!UBERON:0005408;2.30e-26;2!UBERON:0001899;2.30e-26;2!UBERON:0000073;2.04e-23;53!UBERON:0002616;2.04e-23;53!UBERON:0001872;2.47e-23;5!UBERON:0000955;1.17e-17;68!UBERON:0001870;1.23e-17;3!UBERON:0001017;5.83e-16;75!UBERON:0002581;6.24e-14;1!UBERON:0002022;6.24e-14;1!UBERON:0007190;6.24e-14;1!UBERON:0003296;1.07e-13;4!UBERON:0010133;1.07e-13;4!UBERON:0002784;1.07e-13;4!UBERON:0002902;1.42e-13;1!UBERON:0001882;1.42e-13;1!UBERON:0003112;1.42e-13;1!UBERON:0011158;1.42e-13;1!UBERON:0009899;1.42e-13;1!UBERON:0003128;1.42e-13;1!UBERON:0005403;1.42e-13;1!UBERON:0001703;1.42e-13;1!UBERON:0002241;1.42e-13;1!UBERON:0001016;1.60e-11;83!UBERON:0002021;6.97e-11;5!UBERON:0007023;5.30e-09;114!UBERON:0001894;3.27e-08;7!UBERON:0001871;6.29e-08;6!UBERON:0002771;1.99e-07;2!UBERON:0002360;1.99e-07;2!UBERON:0002702;1.99e-07;2!UBERON:0000094;1.99e-07;2!UBERON:0010743;1.99e-07;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.50e-58!41;UBERON:0001890!3.50e-58!41;UBERON:0006240!3.50e-58!41;UBERON:0003080!1.08e-56!42;UBERON:0001049!7.59e-52!57;UBERON:0005068!7.59e-52!57;UBERON:0006241!7.59e-52!57;UBERON:0007135!7.59e-52!57;UBERON:0002616!6.64e-50!59;UBERON:0000955!4.78e-48!69;UBERON:0006238!4.78e-48!69;UBERON:0001950!5.79e-47!20;UBERON:0001893!1.29e-43!34;UBERON:0005743!2.26e-43!86;UBERON:0001017!1.10e-42!82;UBERON:0002619!1.43e-42!22;UBERON:0001869!8.16e-42!32;UBERON:0003056!7.14e-41!61;UBERON:0002791!3.81e-40!33;UBERON:0002020!7.82e-39!34;UBERON:0003528!7.82e-39!34;UBERON:0000073!1.09e-38!94;UBERON:0001016!1.09e-38!94;UBERON:0003075!5.86e-38!86;UBERON:0007284!5.86e-38!86;UBERON:0000956!2.99e-37!25;UBERON:0000203!2.99e-37!25;UBERON:0002346!5.42e-36!90;UBERON:0007023!6.35e-34!115;UBERON:0000033!2.02e-28!123;UBERON:0000200!1.20e-27!6;UBERON:0000153!8.57e-27!129;UBERON:0007811!8.57e-27!129;UBERON:0003296!8.35e-19!4;UBERON:0010133!8.35e-19!4;UBERON:0004121!1.01e-18!169;UBERON:0000924!3.88e-18!173;UBERON:0006601!3.88e-18!173;UBERON:0001894!2.10e-16!7;UBERON:0006222!2.10e-16!7;UBERON:0001872!1.89e-15!5;UBERON:0002021!3.15e-15!5;UBERON:0002771!2.60e-14!3;UBERON:0000025!3.60e-13!194;UBERON:0001905!7.90e-11!2;UBERON:0002757!7.90e-11!2;UBERON:0010134!7.90e-11!2;UBERON:0002784!7.90e-11!2;UBERON:0005408!7.90e-11!2;UBERON:0001899!7.90e-11!2;UBERON:0001870!1.00e-10!2;UBERON:0000007!9.97e-10!2;UBERON:0001871!2.16e-09!7;UBERON:0004111!2.40e-09!241;UBERON:0000477!1.23e-07!286;UBERON:0000483!2.80e-07!309;UBERON:0000119!3.81e-07!312;UBERON:0000475!5.54e-07!365;UBERON:0000988!9.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.84e-58;20!UBERON:0002619;1.12e-52;22!UBERON:0001869;6.54e-48;32!UBERON:0001893;2.63e-47;34!UBERON:0000956;1.73e-46;25!UBERON:0000203;1.73e-46;25!UBERON:0003528;3.66e-40;34!UBERON:0002020;3.66e-40;34!UBERON:0002791;1.49e-39;32!UBERON:0002780;1.56e-36;41!UBERON:0001890;1.56e-36;41!UBERON:0000200;3.37e-33;6!UBERON:0001905;2.30e-26;2!UBERON:0002757;2.30e-26;2!UBERON:0010134;2.30e-26;2!UBERON:0005408;2.30e-26;2!UBERON:0001899;2.30e-26;2!UBERON:0000073;2.04e-23;53!UBERON:0002616;2.04e-23;53!UBERON:0001872;2.47e-23;5!UBERON:0000955;1.17e-17;68!UBERON:0001870;1.23e-17;3!UBERON:0001017;5.83e-16;75!UBERON:0002581;6.24e-14;1!UBERON:0002022;6.24e-14;1!UBERON:0007190;6.24e-14;1!UBERON:0003296;1.07e-13;4!UBERON:0010133;1.07e-13;4!UBERON:0002784;1.07e-13;4!UBERON:0002902;1.42e-13;1!UBERON:0001882;1.42e-13;1!UBERON:0003112;1.42e-13;1!UBERON:0011158;1.42e-13;1!UBERON:0009899;1.42e-13;1!UBERON:0003128;1.42e-13;1!UBERON:0005403;1.42e-13;1!UBERON:0001703;1.42e-13;1!UBERON:0002241;1.42e-13;1!UBERON:0001016;1.60e-11;83!UBERON:0002021;6.97e-11;5!UBERON:0007023;5.30e-09;114!UBERON:0001894;3.27e-08;7!UBERON:0001871;6.29e-08;6!UBERON:0002771;1.99e-07;2!UBERON:0002360;1.99e-07;2!UBERON:0002702;1.99e-07;2!UBERON:0000094;1.99e-07;2!UBERON:0010743;1.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.48e-58,20;UBERON:0002780,2.63e-56,41;UBERON:0001890,2.63e-56,41;UBERON:0003080,2.63e-56,41;UBERON:0006240,2.63e-56,41;UBERON:0002619,7.27e-53,22;UBERON:0001869,1.39e-52,32;UBERON:0001893,1.65e-49,34;UBERON:0000956,1.18e-46,25;UBERON:0000203,1.18e-46,25;UBERON:0002791,3.99e-44,32;UBERON:0000073,1.76e-43,53;UBERON:0002616,1.76e-43,53;UBERON:0003528,1.54e-41,34;UBERON:0002020,1.54e-41,34;UBERON:0001049,4.07e-41,56;UBERON:0005068,4.07e-41,56;UBERON:0006241,4.07e-41,56;UBERON:0007135,4.07e-41,56;UBERON:0003056,1.11e-37,61;UBERON:0000200,2.42e-33,6;UBERON:0000955,3.31e-33,68;UBERON:0006238,3.31e-33,68;UBERON:0001017,5.28e-32,81;UBERON:0001016,1.02e-28,89;UBERON:0003075,9.12e-28,82;UBERON:0007284,9.12e-28,82;UBERON:0002346,2.03e-26,86;UBERON:0001905,2.45e-26,2;UBERON:0002757,2.45e-26,2;UBERON:0010134,2.45e-26,2;UBERON:0005408,2.45e-26,2;UBERON:0001899,2.45e-26,2;UBERON:0007023,3.60e-26,114;UBERON:0001872,2.57e-23,5;UBERON:0010371,1.28e-21,104;UBERON:0010314,2.39e-19,132;UBERON:0001870,9.94e-18,3;UBERON:0004121,2.17e-14,171;UBERON:0000924,2.17e-14,171;UBERON:0006601,2.17e-14,171;UBERON:0002581,5.15e-14,1;UBERON:0002022,5.85e-14,1;UBERON:0007190,8.58e-14,1;UBERON:0003296,1.11e-13,4;UBERON:0010133,1.11e-13,4;UBERON:0002784,1.11e-13,4;UBERON:0002902,1.61e-13,1;UBERON:0009899,1.61e-13,1;UBERON:0003112,1.83e-13,1;UBERON:0011158,1.83e-13,1;UBERON:0003128,1.83e-13,1;UBERON:0001703,1.83e-13,1;UBERON:0002241,1.83e-13,1;UBERON:0004761,1.83e-13,1;UBERON:0009617,1.83e-13,1;UBERON:0001882,2.07e-13,1;UBERON:0005403,2.07e-13,1;UBERON:0011216,2.82e-12,223;UBERON:0000025,5.52e-11,192;UBERON:0002021,6.47e-11,5;UBERON:0004111,1.97e-08,240;UBERON:0001894,3.33e-08,7;UBERON:0006222,3.33e-08,7;UBERON:0001871,5.47e-08,6;UBERON:0002771,1.64e-07,2;UBERON:0002702,1.75e-07,2;UBERON:0002360,1.99e-07,2;UBERON:0000094,1.99e-07,2;UBERON:0010743,1.99e-07,2;UBERON:0005253,2.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16553979779394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,2.36923270966296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,1.95242023843141,0.625954653532499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,1.34881372702565,2.8339315265117,0.638535436228605,0.82046545696302,0,1.65977405914123,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,3.12431239445539,0.413373593002368,2.34638497717455,0,0,0,0,0,7.49982570229601,2.35398605553177,0.606965604236632,0.227662191351298,0,0,0,0.815636795721981,2.43359262182542,0,0,0,0.785577949580009,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76777874496378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16553979779394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,2.36923270966296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,1.95242023843141,0.625954653532499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,1.34881372702565,2.8339315265117,0.638535436228605,0.82046545696302,0,1.65977405914123,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,3.12431239445539,0.413373593002368,2.34638497717455,0,0,0,0,0,7.49982570229601,2.35398605553177,0.606965604236632,0.227662191351298,0,0,0,0.815636795721981,2.43359262182542,0,0,0,0.785577949580009,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76777874496378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@R3HDM2 | |short_description=p18@R3HDM2 | ||
}} | }} |
Latest revision as of 14:05, 19 September 2015
Short description: | p18@R3HDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_R3HDM2_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | -178bp_to_ENST00000403821_5end |
EntrezGene: | R3HDM2 |
HGNC: | 29167 |
UniProt: | B5MCG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data