FFCP PHASE1:Hg19::chr5:52776449..52776465,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10468 | |EntrezGene=10468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3971 | |HGNC=3971 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-129bp_to_uc003jpc.2,uc003jpd.2_5end | |association_with_transcript=-129bp_to_uc003jpc.2,uc003jpd.2_5end | ||
|cluster_id=chr5:52776449..52776465,+ | |||
|coexpression_cluster_id=C4504 | |coexpression_cluster_id=C4504 | ||
|description=CAGE_peak_1_at_FST_5end | |description=CAGE_peak_1_at_FST_5end | ||
|id=chr5:52776449..52776465,+ | |id=chr5:52776449..52776465,+ | ||
|ontology_enrichment_celltype=CL:0000057;9.57e-10;73!CL:0000359;4.35e-09;32!CL:0002620;5.47e-09;23!CL:0000192;1.67e-08;43 | |ontology_enrichment_celltype=CL:0000055!1.02e-33!180;CL:0000057!2.61e-22!75;CL:0002321!1.08e-18!248;CL:0000220!2.92e-18!246;CL:0002371!3.22e-11!591;CL:0000187!4.36e-11!54;CL:0000393!6.46e-11!60;CL:0000211!6.46e-11!60;CL:0000548!6.90e-11!679;CL:0000004!6.90e-11!679;CL:0000255!6.90e-11!679;CL:0000183!9.75e-11!59;CL:0000192!1.87e-10!42;CL:0000514!1.87e-10!42;CL:0000680!2.07e-10!57;CL:0000056!2.07e-10!57;CL:0000355!2.07e-10!57;CL:0000012!2.26e-10!682;CL:0000144!9.93e-10!625;CL:0000359!6.93e-09!32;CL:0002620!1.55e-08!23;CL:0000222!2.28e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0000057;9.57e-10;73!CL:0000359;4.35e-09;32!CL:0002620;5.47e-09;23!CL:0000192;1.67e-08;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.91e-24,76;CL:0002321,2.03e-17,250;CL:0000187,9.69e-12,55;CL:0000393,1.44e-11,61;CL:0000211,1.44e-11,61;CL:0000192,4.82e-11,43;CL:0000514,4.82e-11,43;CL:0000680,8.22e-11,58;CL:0000056,8.22e-11,58;CL:0000355,8.22e-11,58;CL:0000359,2.18e-09,32;CL:0002620,5.15e-09,23;CL:0000222,3.99e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.67e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;4.41e-09;33!UBERON:0004571;4.41e-09;33!UBERON:0001637;9.98e-09;42!UBERON:0003509;9.98e-09;42!UBERON:0004572;9.98e-09;42!UBERON:0002199;7.15e-08;46!UBERON:0002416;7.15e-08;46!UBERON:0003102;8.05e-08;50!UBERON:0002097;8.67e-08;41!UBERON:0000165;3.54e-07;28!UBERON:0003729;9.83e-07;13 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.68e-21!95;UBERON:0000486!5.97e-17!82;UBERON:0000914!1.95e-16!83;UBERON:0002329!1.95e-16!83;UBERON:0003077!1.95e-16!83;UBERON:0003059!1.95e-16!83;UBERON:0007282!1.95e-16!83;UBERON:0009618!1.95e-16!83;UBERON:0007285!1.95e-16!83;UBERON:0005256!6.56e-16!143;UBERON:0002100!1.32e-13!216;UBERON:0004290!1.31e-12!70;UBERON:0000475!3.41e-12!365;UBERON:0000490!3.92e-12!138;UBERON:0004872!3.25e-11!84;UBERON:0001637!5.14e-11!42;UBERON:0003509!5.14e-11!42;UBERON:0004572!5.14e-11!42;UBERON:0001134!1.05e-10!61;UBERON:0002036!1.05e-10!61;UBERON:0003082!1.05e-10!61;UBERON:0002049!1.77e-10!79;UBERON:0007798!1.77e-10!79;UBERON:0002385!2.07e-10!63;UBERON:0001015!2.07e-10!63;UBERON:0000383!2.07e-10!63;UBERON:0002199!2.45e-10!45;UBERON:0002416!2.45e-10!45;UBERON:0001981!5.25e-10!60;UBERON:0007500!5.25e-10!60;UBERON:0004537!5.25e-10!60;UBERON:0006965!5.25e-10!60;UBERON:0004573!5.35e-10!33;UBERON:0004571!5.35e-10!33;UBERON:0000055!5.91e-10!69;UBERON:0000468!8.20e-10!659;UBERON:0003914!1.10e-09!118;UBERON:0003104!1.12e-09!238;UBERON:0009142!1.12e-09!238;UBERON:0002097!1.77e-09!40;UBERON:0000119!1.31e-08!312;UBERON:0000483!1.39e-08!309;UBERON:0004119!1.18e-07!169;UBERON:0000925!1.18e-07!169;UBERON:0006595!1.18e-07!169;UBERON:0000165!2.18e-07!28;UBERON:0000930!2.18e-07!28;UBERON:0004535!2.45e-07!110;UBERON:0000467!4.19e-07!625;UBERON:0000481!5.33e-07!347;UBERON:0000480!6.36e-07!626;UBERON:0001009!9.78e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.41e-09;33!UBERON:0004571;4.41e-09;33!UBERON:0001637;9.98e-09;42!UBERON:0003509;9.98e-09;42!UBERON:0004572;9.98e-09;42!UBERON:0002199;7.15e-08;46!UBERON:0002416;7.15e-08;46!UBERON:0003102;8.05e-08;50!UBERON:0002097;8.67e-08;41!UBERON:0000165;3.54e-07;28!UBERON:0003729;9.83e-07;13 | |||
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|phase1_expression=41.0593137151458,59.3058451178023,15.7868932587488,63.0461779624722,33.5220820820466,46.2339417773195,15.1979926900986,17.6881564559513,5.48489819219661,43.7406406972686,4.18680700783456,0,1.58260186937072,0.495065411840187,3.97676850873499,15.4634783683908,10.2458069764076,13.8758917173601,14.1500511649247,1.60057375499824,5.71201935483908,11.5978246946892,0.572471974262113,0.547497700291537,0.87879847716362,0,0,0,0,0,1.70297735647684,376.043280811881,355.422984158335,88.0014544196955,0,0,0,2.76997704265939,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,9.38981203585091,5.24236503558474,128.672338248906,68.181955846481,154.261542693277,0.795285947051099,18.4921250715002,1.03988298880475,1.77383517970051,1.58102614247627,0.523916301990851,110.745767640933,114.201608377604,0.97364218096405,0.696518949197069,0.930705723632056,0,0,0,3.9752481473341,3.4409383804245,12.4970580578734,3.39184765154406,38.1744486951014,14.0310201389434,12.3307030256718,0,3.5576626268671,5.69025041699939,0.402829317109147,13.6848979029332,14.6437234528902,0.735326160691737,25.9245423322163,0.17859945656816,0,4.39184773884957,0,2.84779697870439,0.366403487860815,0,0,99.8655379406404,92.9337549670246,66.2277576005752,230.78920215744,160.628507619336,89.7311006961843,81.2982520206345,10.6748995729705,10.3600370335207,23.963249725782,23.1702355959863,11.6057951210556,1.81628913173918,4.03323147135999,170.586002375004,4.68240115245481,10.8389646093445,21.3711613189076,136.458887424055,34.478937150412,39.0453242632251,11.432633590274,34.0251058953597,16.2221476445952,437.185051479796,495.522926274228,25.4845181342647,22.2771623963034,35.3505839303539,41.6644671173641,40.7284249761749,792.793583310793,904.138997607108,531.241776293726,13.9521585286826,211.679770112857,168.283222389031,66.3346850629429,79.2240493662822,30.8127062422932,37.1002377665706,37.9678386916443,19.9156072044694,28.938790532876,48.7197184291141,85.3302560414115,10.9919318636792,104.017810607368,49.3685281315437,50.8681776931463,278.488889408311,416.483326142204,445.120732043734,20.0036878052536,19.2168164066154,34.0448252607689,40.013167235933,43.9038280523593,29.5631660851422,9.38697193978896,25.7296375277154,16.5761905622977,6.03678306441573,2.16563844500876,0,0,0,0,0,0,0,0,0,2.21446636387394,23.8411015465858,25.5175887025468,14.7008711385542,48.1669132322957,0.982827216677626,43.7184530944239,0,0,2.23038153388083,287.43599748519,233.795646775849,183.867490540873,67.2192111850925,18.5710734026885,20.7986957055916,2.88662684050547,0.34779121492523,4.93116515790451,4.18662698507114,21.7603190911007,42.2364217960808,0,0,0,0,0.148631162288728,267.141426862314,101.62918756031,349.90093999421,104.335678948818,200.24678363612,312.073500840482,126.121788901362,11.1821511196797,1.86595303986695,0.720599767084807,0.88369703398466,3.11139682031628,1.52795370223311,0,11.9750712215894,1.23392991243988,0,0.285826432630578,3.25180144601546,0.87192013766656,3.15354629030085,24.9494411412511,0,14.370146793452,13.2969058292435,26.0018592278415,26.2351521747385,24.1143524439573,24.7772626484972,44.7521120150002,3.7983512377401,3.29296134712308,22.150060531974,37.6715465667099,3.95975936466715,6.93310567237048,0,0.299918973546171,0,0,0,114.540680924976,4.59447743336456,22.8219048065149,1.30303176000821,1.2328579353023,0.358121926479791,0,0,0,0,2.54094624222463,2.60279707715243,3.86644406388848,2.34522771468088,5.10351001322531,0,0,0,0.858840442033979,2.50085260529839,2.98391526069709,11.0224556611328,24.9800584316026,7.09660867652706,27.2939496933022,17.4548737842077,45.481500811197,8.27784570340039,81.6997486198587,46.6453996410509,478.728715719137,3.13281851940385,5.83343820478455,0,0,0,0,13.3148351608398,3.93107381328584,38.2086024040916,115.403403912623,89.2499100297174,23.3213251645376,136.62583550081,72.7059723569106,25.2310712956485,35.4682295746108,21.1298453122621,30.7976835051784,110.601193416111,41.9519466240453,0,186.070004441448,39.8710682092431,67.8553388652826,187.007629542898,60.1861064663757,0.451199612907412,0,0,0,0,1.13733384070897,2.89159298970077,1.29549549661284,1.54227252690289,2.98041081298238,1.00337954770971,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,4.43076350085206,3.93748698718877,2.7228134973794,107.387655605284,219.070302914308,115.692429487795,18.6574486303795,11.3995976664837,5.83313963959292,7.44317491416465,1.07420244868274,3.77043404176994,14.7442065429855,14.6902858817117,60.163709191396,162.20841685615,109.491707320353,40.2607967805089,16.7344397747023,78.3882743608294,41.1251989394754,425.086340643003,96.3473914873809,30.4476547226275,4.633105477598,14.7418633344251,8.18748412591268,10.1241415909992,11.6284418293533,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| ||
|short_description=p1@FST | |short_description=p1@FST | ||
}} | }} |
Latest revision as of 02:50, 18 September 2015
Short description: | p1@FST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FST_5end |
Coexpression cluster: | C4504_Fibroblast_Pancreatic_prostate_Gingival_Smooth_Tracheal_hepatic |
Association with transcript: | -129bp_to_uc003jpc.2, uc003jpd.2_5end |
EntrezGene: | FST |
HGNC: | 3971 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.91e-24 | 76 |
embryonic cell | 2.03e-17 | 250 |
muscle cell | 9.69e-12 | 55 |
electrically responsive cell | 1.44e-11 | 61 |
electrically active cell | 1.44e-11 | 61 |
smooth muscle cell | 4.82e-11 | 43 |
smooth muscle myoblast | 4.82e-11 | 43 |
muscle precursor cell | 8.22e-11 | 58 |
myoblast | 8.22e-11 | 58 |
multi-potent skeletal muscle stem cell | 8.22e-11 | 58 |
vascular associated smooth muscle cell | 2.18e-09 | 32 |
skin fibroblast | 5.15e-09 | 23 |
mesodermal cell | 3.99e-07 | 121 |