FFCP PHASE1:Hg19::chr4:145608930..145608933,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:145608930..145608933,+ | |||
|coexpression_cluster_id=C606 | |coexpression_cluster_id=C606 | ||
|description=CAGE_peak_at_chr4:145608930..145608933,+ | |description=CAGE_peak_at_chr4:145608930..145608933,+ | ||
|id=chr4:145608930..145608933,+ | |id=chr4:145608930..145608933,+ | ||
|ontology_enrichment_celltype=CL:0002139;3.44e-38;24!CL:0000071;2.72e-30;18!CL:0000115;1.14e-25;36!CL:0002078;4.09e-17;45!CL:0002543;9.47e-14;6!CL:0000213;1.96e-13;58!CL:0000215;1.96e-13;58!CL:1000413;5.18e-13;9!CL:0002138;1.84e-09;6!CL:0002594;2.47e-08;4!CL:0002618;5.89e-08;3!CL:0000359;2.58e-07;32!CL:0002144;3.89e-07;3!CL:0002544;6.55e-07;6 | |ontology_enrichment_celltype=CL:0002139!5.36e-23!24;CL:0000071!4.62e-18!18;CL:0002546!4.62e-18!18;CL:0000115!9.28e-17!35;CL:0000222!1.30e-13!119;CL:0002078!4.03e-13!44;CL:0000213!2.80e-10!57;CL:0000215!2.80e-10!57;CL:1000413!7.94e-10!9;CL:0000359!3.60e-08!32;CL:0002543!2.78e-07!6;CL:0002544!9.84e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;3.44e-38;24!CL:0000071;2.72e-30;18!CL:0000115;1.14e-25;36!CL:0002078;4.09e-17;45!CL:0002543;9.47e-14;6!CL:0000213;1.96e-13;58!CL:0000215;1.96e-13;58!CL:1000413;5.18e-13;9!CL:0002138;1.84e-09;6!CL:0002594;2.47e-08;4!CL:0002618;5.89e-08;3!CL:0000359;2.58e-07;32!CL:0002144;3.89e-07;3!CL:0002544;6.55e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.69e-38,24;CL:0000071,2.04e-30,18;CL:0002546,2.04e-30,18;CL:0000115,2.05e-30,36;CL:0002078,7.19e-25,45;CL:0000213,3.80e-21,58;CL:0000215,3.80e-21,58;CL:0000222,2.98e-20,121;CL:0002543,7.12e-14,6;CL:1000413,5.39e-13,9;CL:0005020,1.91e-09,6;CL:0002138,1.91e-09,6;CL:0005022,1.91e-09,6;CL:0000359,5.16e-08,32;CL:0002594,5.49e-08,4;CL:0002618,5.67e-08,3;CL:0000076,1.98e-07,63;CL:0002144,3.55e-07,3;CL:0002544,6.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.72e-30;18!CL:0005022;1.84e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;2.72e-30;18!UBERON:0001986;2.72e-30;18!UBERON:0004852;2.72e-30;18!UBERON:0000487;6.68e-24;22!UBERON:0006914;5.16e-23;25!UBERON:0007500;5.53e-21;56!UBERON:0001981;5.53e-21;56!UBERON:0004537;5.53e-21;56!UBERON:0000055;2.57e-20;65!UBERON:0001637;9.13e-20;42!UBERON:0003509;9.13e-20;42!UBERON:0004572;9.13e-20;42!UBERON:0002049;8.32e-18;75!UBERON:0007798;8.32e-18;75!UBERON:0000490;1.56e-16;33!UBERON:0003914;2.59e-14;74!UBERON:0003915;5.18e-13;9!UBERON:0004700;5.18e-13;9!UBERON:0001917;5.18e-13;9!UBERON:0004573;1.17e-12;33!UBERON:0004571;1.17e-12;33!UBERON:0010260;4.53e-11;9!UBERON:0004535;6.14e-11;109!UBERON:0000025;5.33e-10;93!UBERON:0001638;7.33e-09;9!UBERON:0003920;7.33e-09;9!UBERON:0004582;7.33e-09;9!UBERON:0001009;1.57e-08;112!UBERON:0001310;2.47e-08;4!UBERON:0000947;2.66e-07;21!UBERON:0010191;2.66e-07;21!UBERON:0010523;3.89e-07;3!UBERON:0001915;3.89e-07;3!UBERON:0001982;3.89e-07;3!UBERON:0001473;5.70e-07;8!UBERON:0004536;5.70e-07;8!UBERON:0006558;5.70e-07;8 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.05e-32!194;UBERON:0004111!4.24e-27!241;UBERON:0000055!4.28e-26!69;UBERON:0002049!1.42e-25!79;UBERON:0007798!1.42e-25!79;UBERON:0000477!4.21e-25!286;UBERON:0001981!1.48e-23!60;UBERON:0007500!1.48e-23!60;UBERON:0004537!1.48e-23!60;UBERON:0006965!1.48e-23!60;UBERON:0004535!4.61e-21!110;UBERON:0004872!1.16e-20!84;UBERON:0000119!2.59e-20!312;UBERON:0001009!7.20e-20!113;UBERON:0000483!7.44e-20!309;UBERON:0001049!7.95e-19!57;UBERON:0005068!7.95e-19!57;UBERON:0006241!7.95e-19!57;UBERON:0007135!7.95e-19!57;UBERON:0002616!2.21e-18!59;UBERON:0001986!4.62e-18!18;UBERON:0004638!4.62e-18!18;UBERON:0004852!4.62e-18!18;UBERON:0001637!1.43e-17!42;UBERON:0003509!1.43e-17!42;UBERON:0004572!1.43e-17!42;UBERON:0003914!5.14e-16!118;UBERON:0000955!1.02e-14!69;UBERON:0006238!1.02e-14!69;UBERON:0001017!8.46e-14!82;UBERON:0005743!8.56e-14!86;UBERON:0001893!9.10e-14!34;UBERON:0002020!1.22e-13!34;UBERON:0003528!1.22e-13!34;UBERON:0002780!1.32e-13!41;UBERON:0001890!1.32e-13!41;UBERON:0006240!1.32e-13!41;UBERON:0006914!1.71e-13!25;UBERON:0000487!2.19e-13!22;UBERON:0002346!3.08e-13!90;UBERON:0000073!3.62e-13!94;UBERON:0001016!3.62e-13!94;UBERON:0002791!4.61e-13!33;UBERON:0003080!4.92e-13!42;UBERON:0003075!5.06e-13!86;UBERON:0007284!5.06e-13!86;UBERON:0001869!2.35e-12!32;UBERON:0004573!4.46e-12!33;UBERON:0004571!4.46e-12!33;UBERON:0007023!4.32e-10!115;UBERON:0003915!7.94e-10!9;UBERON:0004700!7.94e-10!9;UBERON:0001917!7.94e-10!9;UBERON:0003056!3.63e-09!61;UBERON:0000490!1.91e-08!138;UBERON:0000956!2.93e-08!25;UBERON:0000203!2.93e-08!25;UBERON:0002619!3.06e-08!22;UBERON:0000947!1.02e-07!21;UBERON:0010191!1.02e-07!21;UBERON:0000153!1.32e-07!129;UBERON:0007811!1.32e-07!129;UBERON:0002308!1.74e-07!9;UBERON:0000125!1.74e-07!9;UBERON:0003076!3.55e-07!15;UBERON:0003057!3.55e-07!15;UBERON:0001950!3.99e-07!20;UBERON:0000033!5.73e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.72e-30;18!UBERON:0001986;2.72e-30;18!UBERON:0004852;2.72e-30;18!UBERON:0000487;6.68e-24;22!UBERON:0006914;5.16e-23;25!UBERON:0007500;5.53e-21;56!UBERON:0001981;5.53e-21;56!UBERON:0004537;5.53e-21;56!UBERON:0000055;2.57e-20;65!UBERON:0001637;9.13e-20;42!UBERON:0003509;9.13e-20;42!UBERON:0004572;9.13e-20;42!UBERON:0002049;8.32e-18;75!UBERON:0007798;8.32e-18;75!UBERON:0000490;1.56e-16;33!UBERON:0003914;2.59e-14;74!UBERON:0003915;5.18e-13;9!UBERON:0004700;5.18e-13;9!UBERON:0001917;5.18e-13;9!UBERON:0004573;1.17e-12;33!UBERON:0004571;1.17e-12;33!UBERON:0010260;4.53e-11;9!UBERON:0004535;6.14e-11;109!UBERON:0000025;5.33e-10;93!UBERON:0001638;7.33e-09;9!UBERON:0003920;7.33e-09;9!UBERON:0004582;7.33e-09;9!UBERON:0001009;1.57e-08;112!UBERON:0001310;2.47e-08;4!UBERON:0000947;2.66e-07;21!UBERON:0010191;2.66e-07;21!UBERON:0010523;3.89e-07;3!UBERON:0001915;3.89e-07;3!UBERON:0001982;3.89e-07;3!UBERON:0001473;5.70e-07;8!UBERON:0004536;5.70e-07;8!UBERON:0006558;5.70e-07;8 | |||
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| ||
|short_description=p@chr4:145608930..145608933,+ | |short_description=p@chr4:145608930..145608933,+ | ||
}} | }} |
Latest revision as of 02:01, 30 July 2015
Short description: | p@chr4:145608930..145608933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:145608930..145608933, + |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.69e-38 | 24 |
blood vessel endothelial cell | 2.04e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.04e-30 | 18 |
endothelial cell | 2.05e-30 | 36 |
meso-epithelial cell | 7.19e-25 | 45 |
lining cell | 3.80e-21 | 58 |
barrier cell | 3.80e-21 | 58 |
mesodermal cell | 2.98e-20 | 121 |
vein endothelial cell | 7.12e-14 | 6 |
endothelial cell of artery | 5.39e-13 | 9 |
lymphangioblast | 1.91e-09 | 6 |
endothelial cell of lymphatic vessel | 1.91e-09 | 6 |
vascular lymphangioblast | 1.91e-09 | 6 |
vascular associated smooth muscle cell | 5.16e-08 | 32 |
smooth muscle cell of the umbilical artery | 5.49e-08 | 4 |
endothelial cell of umbilical vein | 5.67e-08 | 3 |
squamous epithelial cell | 1.98e-07 | 63 |
capillary endothelial cell | 3.55e-07 | 3 |
aortic endothelial cell | 6.74e-07 | 6 |