FFCP PHASE1:Hg19::chr18:55470539..55470601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5205 | |EntrezGene=5205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3706 | |HGNC=3706 | ||
|TSSclassifier=strong | |||
|UniProt=O43520 | |UniProt=O43520 | ||
|association_with_transcript=-212bp_to_ENST00000536015,NM_005603_5end | |association_with_transcript=-212bp_to_ENST00000536015,NM_005603_5end | ||
|cluster_id=chr18:55470539..55470601,- | |||
|description=CAGE_peak_1_at_ATP8B1_5end | |description=CAGE_peak_1_at_ATP8B1_5end | ||
|id=chr18:55470539..55470601,- | |id=chr18:55470539..55470601,- | ||
|ontology_enrichment_celltype=CL:0000055!4.02e-26!180;CL:0000222!1.04e-25!119;CL:0000057!2.83e-19!75;CL:0000680!3.63e-13!57;CL:0000056!3.63e-13!57;CL:0000355!3.63e-13!57;CL:0002139!2.98e-12!24;CL:0000187!5.35e-12!54;CL:0000220!5.53e-12!246;CL:0000183!5.87e-12!59;CL:0000213!6.99e-12!57;CL:0000215!6.99e-12!57;CL:0000192!8.79e-12!42;CL:0000514!8.79e-12!42;CL:0002620!1.45e-11!23;CL:0002321!1.65e-11!248;CL:0000359!7.47e-11!32;CL:0002078!4.20e-10!44;CL:0000071!1.77e-09!18;CL:0002546!1.77e-09!18;CL:0000115!3.85e-09!35;CL:0000393!4.97e-09!60;CL:0000211!4.97e-09!60 | |ontology_enrichment_celltype=CL:0000055!4.02e-26!180;CL:0000222!1.04e-25!119;CL:0000057!2.83e-19!75;CL:0000680!3.63e-13!57;CL:0000056!3.63e-13!57;CL:0000355!3.63e-13!57;CL:0002139!2.98e-12!24;CL:0000187!5.35e-12!54;CL:0000220!5.53e-12!246;CL:0000183!5.87e-12!59;CL:0000213!6.99e-12!57;CL:0000215!6.99e-12!57;CL:0000192!8.79e-12!42;CL:0000514!8.79e-12!42;CL:0002620!1.45e-11!23;CL:0002321!1.65e-11!248;CL:0000359!7.47e-11!32;CL:0002078!4.20e-10!44;CL:0000071!1.77e-09!18;CL:0002546!1.77e-09!18;CL:0000115!3.85e-09!35;CL:0000393!4.97e-09!60;CL:0000211!4.97e-09!60 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.11e-12;24!CL:0002620;4.87e-12;23!CL:0000359;1.18e-10;32!CL:0000071;8.49e-10;18!CL:0000192;3.54e-09;43!CL:0000115;1.66e-08;36!CL:0000057;1.76e-08;73!CL:0002078;2.45e-07;45!CL:0000187;3.06e-07;55!CL:0000213;4.11e-07;58!CL:0000215;4.11e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.57e-27,121;CL:0000057,1.29e-20,76;CL:0000680,6.28e-14,58;CL:0000056,6.28e-14,58;CL:0000355,6.28e-14,58;CL:0002139,9.90e-13,24;CL:0000187,1.05e-12,55;CL:0000192,1.78e-12,43;CL:0000514,1.78e-12,43;CL:0000213,2.99e-12,58;CL:0000215,2.99e-12,58;CL:0002620,5.19e-12,23;CL:0000359,2.87e-11,32;CL:0002078,7.50e-11,45;CL:0000071,7.81e-10,18;CL:0002546,7.81e-10,18;CL:0000115,9.64e-10,36;CL:0002321,1.31e-09,250;CL:0000393,2.73e-09,61;CL:0000211,2.73e-09,61 | |||
|ontology_enrichment_development_v019=CL:0002546;8.49e-10;18!CL:0000514;3.54e-09;43!CL:0000355;1.49e-07;58!CL:0000222;2.36e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.17e-24!118;UBERON:0002049!4.74e-24!79;UBERON:0007798!4.74e-24!79;UBERON:0005256!8.98e-24!143;UBERON:0000055!1.47e-23!69;UBERON:0001981!7.84e-23!60;UBERON:0007500!7.84e-23!60;UBERON:0004537!7.84e-23!60;UBERON:0006965!7.84e-23!60;UBERON:0004872!3.24e-22!84;UBERON:0000477!5.09e-21!286;UBERON:0000490!1.53e-19!138;UBERON:0000119!3.50e-19!312;UBERON:0000483!9.85e-19!309;UBERON:0004111!4.14e-18!241;UBERON:0000914!4.40e-18!83;UBERON:0002329!4.40e-18!83;UBERON:0003077!4.40e-18!83;UBERON:0003059!4.40e-18!83;UBERON:0007282!4.40e-18!83;UBERON:0009618!4.40e-18!83;UBERON:0007285!4.40e-18!83;UBERON:0000481!3.90e-17!347;UBERON:0000475!5.48e-17!365;UBERON:0001637!6.89e-17!42;UBERON:0003509!6.89e-17!42;UBERON:0004572!6.89e-17!42;UBERON:0001009!1.09e-16!113;UBERON:0000468!1.62e-16!659;UBERON:0004535!1.87e-16!110;UBERON:0002100!2.75e-16!216;UBERON:0004290!1.17e-14!70;UBERON:0000467!4.59e-14!625;UBERON:0002385!6.12e-14!63;UBERON:0001015!6.12e-14!63;UBERON:0000383!6.12e-14!63;UBERON:0000480!8.87e-14!626;UBERON:0004573!9.06e-14!33;UBERON:0004571!9.06e-14!33;UBERON:0000025!1.44e-13!194;UBERON:0000486!1.45e-13!82;UBERON:0003104!1.76e-13!238;UBERON:0009142!1.76e-13!238;UBERON:0001134!5.58e-13!61;UBERON:0002036!5.58e-13!61;UBERON:0003082!5.58e-13!61;UBERON:0000947!7.54e-10!21;UBERON:0010191!7.54e-10!21;UBERON:0003102!8.98e-10!95;UBERON:0001986!1.77e-09!18;UBERON:0004638!1.77e-09!18;UBERON:0004852!1.77e-09!18;UBERON:0002050!4.82e-08!605;UBERON:0005423!4.82e-08!605;UBERON:0000487!6.51e-08!22;UBERON:0006914!6.63e-08!25;UBERON:0000923!6.86e-08!604;UBERON:0005291!6.86e-08!604;UBERON:0006598!6.86e-08!604;UBERON:0002532!6.86e-08!604;UBERON:0000926!9.58e-08!448;UBERON:0004120!9.58e-08!448;UBERON:0006603!9.58e-08!448;UBERON:0000922!1.13e-07!612 | |ontology_enrichment_uberon=UBERON:0003914!2.17e-24!118;UBERON:0002049!4.74e-24!79;UBERON:0007798!4.74e-24!79;UBERON:0005256!8.98e-24!143;UBERON:0000055!1.47e-23!69;UBERON:0001981!7.84e-23!60;UBERON:0007500!7.84e-23!60;UBERON:0004537!7.84e-23!60;UBERON:0006965!7.84e-23!60;UBERON:0004872!3.24e-22!84;UBERON:0000477!5.09e-21!286;UBERON:0000490!1.53e-19!138;UBERON:0000119!3.50e-19!312;UBERON:0000483!9.85e-19!309;UBERON:0004111!4.14e-18!241;UBERON:0000914!4.40e-18!83;UBERON:0002329!4.40e-18!83;UBERON:0003077!4.40e-18!83;UBERON:0003059!4.40e-18!83;UBERON:0007282!4.40e-18!83;UBERON:0009618!4.40e-18!83;UBERON:0007285!4.40e-18!83;UBERON:0000481!3.90e-17!347;UBERON:0000475!5.48e-17!365;UBERON:0001637!6.89e-17!42;UBERON:0003509!6.89e-17!42;UBERON:0004572!6.89e-17!42;UBERON:0001009!1.09e-16!113;UBERON:0000468!1.62e-16!659;UBERON:0004535!1.87e-16!110;UBERON:0002100!2.75e-16!216;UBERON:0004290!1.17e-14!70;UBERON:0000467!4.59e-14!625;UBERON:0002385!6.12e-14!63;UBERON:0001015!6.12e-14!63;UBERON:0000383!6.12e-14!63;UBERON:0000480!8.87e-14!626;UBERON:0004573!9.06e-14!33;UBERON:0004571!9.06e-14!33;UBERON:0000025!1.44e-13!194;UBERON:0000486!1.45e-13!82;UBERON:0003104!1.76e-13!238;UBERON:0009142!1.76e-13!238;UBERON:0001134!5.58e-13!61;UBERON:0002036!5.58e-13!61;UBERON:0003082!5.58e-13!61;UBERON:0000947!7.54e-10!21;UBERON:0010191!7.54e-10!21;UBERON:0003102!8.98e-10!95;UBERON:0001986!1.77e-09!18;UBERON:0004638!1.77e-09!18;UBERON:0004852!1.77e-09!18;UBERON:0002050!4.82e-08!605;UBERON:0005423!4.82e-08!605;UBERON:0000487!6.51e-08!22;UBERON:0006914!6.63e-08!25;UBERON:0000923!6.86e-08!604;UBERON:0005291!6.86e-08!604;UBERON:0006598!6.86e-08!604;UBERON:0002532!6.86e-08!604;UBERON:0000926!9.58e-08!448;UBERON:0004120!9.58e-08!448;UBERON:0006603!9.58e-08!448;UBERON:0000922!1.13e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.34e-13;42!UBERON:0003509;1.34e-13;42!UBERON:0004572;1.34e-13;42!UBERON:0004573;3.25e-13;33!UBERON:0004571;3.25e-13;33!UBERON:0007500;2.45e-12;56!UBERON:0001981;2.45e-12;56!UBERON:0004537;2.45e-12;56!UBERON:0000055;8.66e-12;65!UBERON:0000947;3.24e-10;21!UBERON:0010191;3.24e-10;21!UBERON:0002049;3.47e-10;75!UBERON:0007798;3.47e-10;75!UBERON:0004638;8.49e-10;18!UBERON:0001986;8.49e-10;18!UBERON:0004852;8.49e-10;18!UBERON:0003914;3.72e-09;74!UBERON:0006914;1.09e-07;25!UBERON:0000487;1.55e-07;22 | |||
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|phase1_expression=3.08853244759946,4.92431204949261,1.26858963686374,2.00146596706261,1.34088328328186,2.61701557230111,2.53299878168311,3.79031924056099,4.70134130759709,0.737201809504527,0.697801167972428,0,0,12.3766352960047,9.61052389610956,10.0848771967766,11.4511960324556,7.30310090387373,10.7345215733912,2.70866327768933,10.6080359447012,0.313454721478088,1.71741592278634,2.6006140763848,5.02170558379211,0,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.880801318004542,0,0,0,0,0,0,0.436194716338694,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,7.31420598941885,2.01210257911091,5.88167784480239,10.1202962667679,12.0321098552613,6.37324683427624,3.1811437882044,5.35298357332899,1.89069634328136,3.32594096193846,6.49977414129133,5.43563163315507,1.45718115317017,0.370784442784429,0,0.174129737299267,0.26591592103773,0,0,0,29.8143611050058,19.7853956874409,32.6312071511139,20.9163938511884,28.1064622260637,12.6554299292431,17.9735671221657,32.8189284145048,31.6631973791172,41.1706353700544,20.9471244896756,3.04108842287405,24.406205754817,15.8095124548724,19.4434067491622,39.9169785429837,33.9039352665516,37.1617885594963,10.7321646226118,10.4419222552494,19.9689900884144,0,0,0.436094052142534,21.866765874594,42.4212214076342,94.407745919825,53.0647748385305,18.7974242565129,20.1843936051231,10.6748995729705,17.020060840784,4.97937656639626,6.33140158727534,6.70193802765181,2.57307626996383,1.15235184896,2.10889288650417,5.93104145977609,14.8322673601557,10.1625102775225,8.80758739828237,10.1979954951923,9.2697532423484,35.1145174558416,14.6172837601004,17.3587312375286,17.8200428592308,12.857880322485,0,3.59309070908119,10.268502951198,12.6369705070684,86.9981322620334,31.1674110825395,55.4742910396226,19.0802334811378,10.3223286675619,38.2099924017276,17.5117058831225,39.6312655168381,27.0081986475962,23.0837665494103,38.1307999267531,29.7786970130544,48.7763600177259,18.3181569703053,24.4860761016791,25.3137221266323,11.4768700341356,52.1864100999423,18.9413944667964,19.3299075233956,1.54608682530637,2.18196896472668,3.44165514466805,0,0.530119073285941,0.929551542956147,0.829288440122964,1.00928340350251,0,4.69348596989448,15.4377825166292,2.76269842704961,5.57241513638375,9.38443326170461,1.53798840051797,2.19160097101532,0.964044119533928,0.441175890929576,0.871517776369625,1.89816495288877,1.07865046528132,0.784885860501384,0,14.763109092493,4.20725321410337,4.115740113314,1.47008711385542,1.26755034821831,6.87979051674338,7.08947888017685,0,2.7057456479485,2.74508496477641,0.109750285408626,0,0.402115889646523,0.555530670951178,1.62904152655162,6.23960871167747,7.21656710126366,0.579652024875384,10.0971477042807,17.3239737313289,9.72269576410883,13.6982989608911,0,0.858486162094873,1.23108503043699,0,1.48631162288728,2.81201501960331,4.19955320497149,3.1190521393325,2.14940454486836,0.871901815541886,0.766765358330422,0,0,0.207328115540772,0,0,0.253991577168676,1.14596527667483,0,0,1.23392991243988,0.600686115687835,1.14330573052231,9.30688000066494,2.1798003441664,9.31396229926065,9.04902010304444,10.7296933755565,5.917119267892,19.1475443941107,13.5209667984776,2.31486636835928,8.5109479213967,2.93064396917709,4.28933980974443,0,0,4.88604276440603,2.84313558994037,0,9.94749944296634,6.97226766880235,5.89840647974137,0,0,2.10833939483032,40.4966005780775,8.04033550838797,11.4109524032575,25.7710725868291,20.342155932488,10.0274139414342,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,11.41030872988,5.00170521059677,14.1057812323863,16.4296980609338,39.6112355129699,26.8094105557689,43.3423235473039,8.72743689210385,4.5481500811197,5.17365356462525,13.9487375692442,16.5932251687533,26.0650843404249,1.95801157462741,2.40200396667599,0,0,0,0,0,1.20956117331872,3.47350930946288,7.82656063769118,5.61320188866147,6.02254001501795,8.69902323413396,8.68611174175481,1.48418066444991,8.48153315914606,7.10246901252508,9.93738587767091,4.15403543346897,5.46188778761808,1.69203229428271,2.80709058424599,1.84161977871793,6.7740524417118,11.2896524164165,6.29397191805236,6.76799419361118,10.8591625317225,6.27479815341484,2.92278449306521,11.5051275493235,6.8240030442538,8.16449785327275,18.7846847008861,7.71136263451447,6.23176806350862,3.51182841698397,4.58777291481069,4.98645605357235,4.47749509444357,0,0,3.84675187674584,1.96808787419823,1.62689197332152,5.564214628977,0.732555718546747,0.247528499761764,0.574265537996172,0.650060246036521,32.1367859688319,3.0934629853479,4.92955574766862,3.22357716924872,7.16750176919559,3.75970857038958,4.49551751134108,5.96586391912706,2.40386496246191,0.495854746082934,1.92190067365106,1.27612712494584,1.6185244936888,3.71876439437829,42.814479168967,8.3644472419272,8.62494024493049,20.22762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| ||
|short_description=p1@ATP8B1 | |short_description=p1@ATP8B1 | ||
}} | }} |
Latest revision as of 23:01, 19 September 2015
Short description: | p1@ATP8B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP8B1_5end |
Coexpression cluster: | NA |
Association with transcript: | -212bp_to_ENST00000536015, NM_005603_5end |
EntrezGene: | ATP8B1 |
HGNC: | 3706 |
UniProt: | O43520 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.57e-27 | 121 |
fibroblast | 1.29e-20 | 76 |
muscle precursor cell | 6.28e-14 | 58 |
myoblast | 6.28e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.28e-14 | 58 |
endothelial cell of vascular tree | 9.90e-13 | 24 |
muscle cell | 1.05e-12 | 55 |
smooth muscle cell | 1.78e-12 | 43 |
smooth muscle myoblast | 1.78e-12 | 43 |
lining cell | 2.99e-12 | 58 |
barrier cell | 2.99e-12 | 58 |
skin fibroblast | 5.19e-12 | 23 |
vascular associated smooth muscle cell | 2.87e-11 | 32 |
meso-epithelial cell | 7.50e-11 | 45 |
blood vessel endothelial cell | 7.81e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.81e-10 | 18 |
endothelial cell | 9.64e-10 | 36 |
embryonic cell | 1.31e-09 | 250 |
electrically responsive cell | 2.73e-09 | 61 |
electrically active cell | 2.73e-09 | 61 |