FFCP PHASE1:Hg19::chr18:60867334..60867342,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:60867334..60867342,- | |||
|coexpression_cluster_id=C239 | |coexpression_cluster_id=C239 | ||
|description=CAGE_peak_at_chr18:60867334..60867342,- | |description=CAGE_peak_at_chr18:60867334..60867342,- | ||
|id=chr18:60867334..60867342,- | |id=chr18:60867334..60867342,- | ||
|ontology_enrichment_celltype=CL:0000625!2.67e-15!11;CL:0000084!3.45e-15!25;CL:0000827!3.45e-15!25;CL:0000791!7.00e-15!18;CL:0000789!7.00e-15!18;CL:0002420!7.00e-15!18;CL:0002419!7.00e-15!18;CL:0000790!7.00e-15!18;CL:0000542!1.85e-08!53;CL:0000051!1.85e-08!53;CL:0000838!2.42e-07!52 | |ontology_enrichment_celltype=CL:0000625!2.67e-15!11;CL:0000084!3.45e-15!25;CL:0000827!3.45e-15!25;CL:0000791!7.00e-15!18;CL:0000789!7.00e-15!18;CL:0002420!7.00e-15!18;CL:0002419!7.00e-15!18;CL:0000790!7.00e-15!18;CL:0000542!1.85e-08!53;CL:0000051!1.85e-08!53;CL:0000838!2.42e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002127;5.16e-21;1!CL:0000911;5.16e-21;1!CL:0000814;5.16e-21;1!CL:0000791;1.61e-10;18!CL:0000789;1.61e-10;18!CL:0002419;1.61e-10;18!CL:0000625;3.89e-08;11!CL:0000084;9.68e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.31e-21,1;CL:0000914,6.31e-21,1;CL:0000911,6.31e-21,1;CL:0000814,6.31e-21,1;CL:0002042,6.31e-21,1;CL:0002039,6.31e-21,1;CL:0002040,6.31e-21,1;CL:0002041,6.31e-21,1;CL:0000893,3.70e-11,2;CL:0002489,3.70e-11,2;CL:0000809,3.70e-11,2;CL:0000808,3.70e-11,2;CL:0000894,3.70e-11,2;CL:0000806,3.70e-11,2;CL:0000807,3.70e-11,2;CL:0000805,3.70e-11,2;CL:0002425,3.70e-11,2;CL:0000791,1.67e-10,18;CL:0000789,1.67e-10,18;CL:0002420,1.67e-10,18;CL:0002419,1.67e-10,18;CL:0000790,1.67e-10,18;CL:0000625,3.90e-08,11;CL:0000084,9.91e-08,25;CL:0000827,9.91e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002425;3.34e-11;2!CL:0000790;1.61e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.35e-14!15;UBERON:0000179!4.35e-14!15;UBERON:0000463!4.35e-14!15 | |ontology_enrichment_uberon=UBERON:0000178!4.35e-14!15;UBERON:0000179!4.35e-14!15;UBERON:0000463!4.35e-14!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84840836632966,0.651844533267181,0,0,3.67654507721073,0,0.221533894583621,0.270803863765016,1.0247305578054,0.910415432919148,1.97325485524411,0.829050053357545,1.44901542867526,0.741432815810302,0,0,2.15287751125376,0,0.34362744548263,0,1.91139248594458,0,0,0.451725357233318,0.383959833463255,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84840836632966,0.651844533267181,0,0,3.67654507721073,0,0.221533894583621,0.270803863765016,1.0247305578054,0.910415432919148,1.97325485524411,0.829050053357545,1.44901542867526,0.741432815810302,0,0,2.15287751125376,0,0.34362744548263,0,1.91139248594458,0,0,0.451725357233318,0.383959833463255,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:60867334..60867342,- | |short_description=p@chr18:60867334..60867342,- | ||
}} | }} |
Latest revision as of 01:48, 26 July 2015
Short description: | p@chr18:60867334..60867342, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:60867334..60867342, - |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.31e-21 | 1 |
immature NK T cell | 6.31e-21 | 1 |
effector T cell | 6.31e-21 | 1 |
mature NK T cell | 6.31e-21 | 1 |
immature NK T cell stage IV | 6.31e-21 | 1 |
immature NK T cell stage I | 6.31e-21 | 1 |
immature NK T cell stage II | 6.31e-21 | 1 |
immature NK T cell stage III | 6.31e-21 | 1 |
thymocyte | 3.70e-11 | 2 |
double negative thymocyte | 3.70e-11 | 2 |
double-positive, alpha-beta thymocyte | 3.70e-11 | 2 |
DN4 thymocyte | 3.70e-11 | 2 |
DN1 thymic pro-T cell | 3.70e-11 | 2 |
DN2 thymocyte | 3.70e-11 | 2 |
DN3 thymocyte | 3.70e-11 | 2 |
immature single positive thymocyte | 3.70e-11 | 2 |
early T lineage precursor | 3.70e-11 | 2 |
mature alpha-beta T cell | 1.67e-10 | 18 |
alpha-beta T cell | 1.67e-10 | 18 |
immature T cell | 1.67e-10 | 18 |
mature T cell | 1.67e-10 | 18 |
immature alpha-beta T cell | 1.67e-10 | 18 |
CD8-positive, alpha-beta T cell | 3.90e-08 | 11 |
T cell | 9.91e-08 | 25 |
pro-T cell | 9.91e-08 | 25 |