FFCP PHASE1:Hg19::chr7:33945106..33945116,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=168667 | |EntrezGene=168667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24154 | |HGNC=24154 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8U9 | |UniProt=Q8N8U9 | ||
|association_with_transcript=0bp_to_ENST00000426693,ENST00000496609_5end | |association_with_transcript=0bp_to_ENST00000426693,ENST00000496609_5end | ||
|cluster_id=chr7:33945106..33945116,+ | |||
|coexpression_cluster_id=C4684 | |coexpression_cluster_id=C4684 | ||
|description=CAGE_peak_3_at_BMPER_5end | |description=CAGE_peak_3_at_BMPER_5end | ||
|id=chr7:33945106..33945116,+ | |id=chr7:33945106..33945116,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.69e-30!180;CL:0000057!2.93e-20!75;CL:0000192!5.00e-18!42;CL:0000514!5.00e-18!42;CL:0000680!7.35e-18!57;CL:0000056!7.35e-18!57;CL:0000355!7.35e-18!57;CL:0000187!7.71e-18!54;CL:0000359!3.57e-17!32;CL:0000183!7.10e-16!59;CL:0000393!3.87e-15!60;CL:0000211!3.87e-15!60;CL:0002620!9.25e-14!23;CL:0002494!3.69e-10!16;CL:0002539!9.87e-08!10;CL:0000222!6.53e-07!119 | |ontology_enrichment_celltype=CL:0000055!4.69e-30!180;CL:0000057!2.93e-20!75;CL:0000192!5.00e-18!42;CL:0000514!5.00e-18!42;CL:0000680!7.35e-18!57;CL:0000056!7.35e-18!57;CL:0000355!7.35e-18!57;CL:0000187!7.71e-18!54;CL:0000359!3.57e-17!32;CL:0000183!7.10e-16!59;CL:0000393!3.87e-15!60;CL:0000211!3.87e-15!60;CL:0002620!9.25e-14!23;CL:0002494!3.69e-10!16;CL:0002539!9.87e-08!10;CL:0000222!6.53e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.08e-18;32!CL:0002539;5.14e-14;10!CL:0002620;5.95e-14;23!CL:0000192;6.32e-13;43!CL:0002494;1.43e-12;16!CL:1000306;8.94e-10;4!CL:0002547;8.94e-10;4!CL:0002592;7.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.53e-20,32;CL:0000057,7.09e-18,76;CL:0000192,6.29e-17,43;CL:0000514,6.29e-17,43;CL:0002539,2.68e-14,10;CL:0002620,5.78e-14,23;CL:0000187,1.52e-13,55;CL:0000680,1.53e-12,58;CL:0000056,1.53e-12,58;CL:0000355,1.53e-12,58;CL:0002494,1.87e-12,16;CL:0000393,1.21e-11,61;CL:0000211,1.21e-11,61;CL:0000048,3.73e-11,427;CL:0000723,9.37e-11,433;CL:0000034,3.07e-10,441;CL:1000306,1.46e-09,4;CL:0002547,1.46e-09,4;CL:0002592,9.28e-08,3;CL:0000135,7.07e-07,3;CL:0000388,7.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;6.32e-13;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;5.74e-12;5!DOID:450;5.74e-12;5!DOID:66;5.74e-12;5!DOID:423;5.74e-12;5!DOID:0080000;5.74e-12;5!DOID:11722;5.74e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.22e-12,5;DOID:450,6.22e-12,5;DOID:66,6.22e-12,5;DOID:423,6.22e-12,5;DOID:0080000,6.22e-12,5;DOID:11722,6.22e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.43e-18!70;UBERON:0000914!6.35e-18!83;UBERON:0002329!6.35e-18!83;UBERON:0003077!6.35e-18!83;UBERON:0003059!6.35e-18!83;UBERON:0007282!6.35e-18!83;UBERON:0009618!6.35e-18!83;UBERON:0007285!6.35e-18!83;UBERON:0004872!2.37e-17!84;UBERON:0000486!2.63e-16!82;UBERON:0001134!1.37e-15!61;UBERON:0002036!1.37e-15!61;UBERON:0003082!1.37e-15!61;UBERON:0002385!3.36e-15!63;UBERON:0001015!3.36e-15!63;UBERON:0000383!3.36e-15!63;UBERON:0001637!4.86e-14!42;UBERON:0003509!4.86e-14!42;UBERON:0004572!4.86e-14!42;UBERON:0004573!3.40e-13!33;UBERON:0004571!3.40e-13!33;UBERON:0000475!1.21e-12!365;UBERON:0001981!1.71e-12!60;UBERON:0007500!1.71e-12!60;UBERON:0004537!1.71e-12!60;UBERON:0006965!1.71e-12!60;UBERON:0000025!3.53e-12!194;UBERON:0000948!5.27e-12!24;UBERON:0005498!5.27e-12!24;UBERON:0004140!5.27e-12!24;UBERON:0009881!5.27e-12!24;UBERON:0004141!5.27e-12!24;UBERON:0003084!5.27e-12!24;UBERON:0007005!5.27e-12!24;UBERON:0004139!5.27e-12!24;UBERON:0004291!5.27e-12!24;UBERON:0007100!1.54e-11!27;UBERON:0002199!3.53e-11!45;UBERON:0002416!3.53e-11!45;UBERON:0003914!4.47e-11!118;UBERON:0000055!1.42e-10!69;UBERON:0005256!6.20e-10!143;UBERON:0000483!1.16e-09!309;UBERON:0002097!1.57e-09!40;UBERON:0004111!2.81e-09!241;UBERON:0000119!3.01e-09!312;UBERON:0000477!5.83e-09!286;UBERON:0001009!6.38e-09!113;UBERON:0004535!8.50e-09!110;UBERON:0000468!1.64e-08!659;UBERON:0002049!4.09e-08!79;UBERON:0007798!4.09e-08!79;UBERON:0000481!5.32e-08!347;UBERON:0004237!9.87e-08!10;UBERON:0004695!9.87e-08!10;UBERON:0002111!9.87e-08!10;UBERON:0004178!9.87e-08!10;UBERON:0002100!1.74e-07!216;UBERON:0001135!6.04e-07!15;UBERON:0003102!9.79e-07!95 | |ontology_enrichment_uberon=UBERON:0004290!3.43e-18!70;UBERON:0000914!6.35e-18!83;UBERON:0002329!6.35e-18!83;UBERON:0003077!6.35e-18!83;UBERON:0003059!6.35e-18!83;UBERON:0007282!6.35e-18!83;UBERON:0009618!6.35e-18!83;UBERON:0007285!6.35e-18!83;UBERON:0004872!2.37e-17!84;UBERON:0000486!2.63e-16!82;UBERON:0001134!1.37e-15!61;UBERON:0002036!1.37e-15!61;UBERON:0003082!1.37e-15!61;UBERON:0002385!3.36e-15!63;UBERON:0001015!3.36e-15!63;UBERON:0000383!3.36e-15!63;UBERON:0001637!4.86e-14!42;UBERON:0003509!4.86e-14!42;UBERON:0004572!4.86e-14!42;UBERON:0004573!3.40e-13!33;UBERON:0004571!3.40e-13!33;UBERON:0000475!1.21e-12!365;UBERON:0001981!1.71e-12!60;UBERON:0007500!1.71e-12!60;UBERON:0004537!1.71e-12!60;UBERON:0006965!1.71e-12!60;UBERON:0000025!3.53e-12!194;UBERON:0000948!5.27e-12!24;UBERON:0005498!5.27e-12!24;UBERON:0004140!5.27e-12!24;UBERON:0009881!5.27e-12!24;UBERON:0004141!5.27e-12!24;UBERON:0003084!5.27e-12!24;UBERON:0007005!5.27e-12!24;UBERON:0004139!5.27e-12!24;UBERON:0004291!5.27e-12!24;UBERON:0007100!1.54e-11!27;UBERON:0002199!3.53e-11!45;UBERON:0002416!3.53e-11!45;UBERON:0003914!4.47e-11!118;UBERON:0000055!1.42e-10!69;UBERON:0005256!6.20e-10!143;UBERON:0000483!1.16e-09!309;UBERON:0002097!1.57e-09!40;UBERON:0004111!2.81e-09!241;UBERON:0000119!3.01e-09!312;UBERON:0000477!5.83e-09!286;UBERON:0001009!6.38e-09!113;UBERON:0004535!8.50e-09!110;UBERON:0000468!1.64e-08!659;UBERON:0002049!4.09e-08!79;UBERON:0007798!4.09e-08!79;UBERON:0000481!5.32e-08!347;UBERON:0004237!9.87e-08!10;UBERON:0004695!9.87e-08!10;UBERON:0002111!9.87e-08!10;UBERON:0004178!9.87e-08!10;UBERON:0002100!1.74e-07!216;UBERON:0001135!6.04e-07!15;UBERON:0003102!9.79e-07!95 | ||
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| ||
|short_description=p3@BMPER | |short_description=p3@BMPER | ||
}} | }} |
Latest revision as of 08:34, 18 September 2015
Short description: | p3@BMPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BMPER_5end |
Coexpression cluster: | C4684_Smooth_lung_Fibroblast_mesenchymal_Chondrocyte_basal_mesodermal |
Association with transcript: | 0bp_to_ENST00000426693, ENST00000496609_5end |
EntrezGene: | BMPER |
HGNC: | 24154 |
UniProt: | Q8N8U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.53e-20 | 32 |
fibroblast | 7.09e-18 | 76 |
smooth muscle cell | 6.29e-17 | 43 |
smooth muscle myoblast | 6.29e-17 | 43 |
aortic smooth muscle cell | 2.68e-14 | 10 |
skin fibroblast | 5.78e-14 | 23 |
muscle cell | 1.52e-13 | 55 |
muscle precursor cell | 1.53e-12 | 58 |
myoblast | 1.53e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-12 | 58 |
cardiocyte | 1.87e-12 | 16 |
electrically responsive cell | 1.21e-11 | 61 |
electrically active cell | 1.21e-11 | 61 |
multi fate stem cell | 3.73e-11 | 427 |
somatic stem cell | 9.37e-11 | 433 |
stem cell | 3.07e-10 | 441 |
fibroblast of tunica adventitia of artery | 1.46e-09 | 4 |
fibroblast of the aortic adventitia | 1.46e-09 | 4 |
smooth muscle cell of the coronary artery | 9.28e-08 | 3 |
fibrocyte | 7.07e-07 | 3 |
tendon cell | 7.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.22e-12 | 5 |
myotonic disease | 6.22e-12 | 5 |
muscle tissue disease | 6.22e-12 | 5 |
myopathy | 6.22e-12 | 5 |
muscular disease | 6.22e-12 | 5 |
myotonic dystrophy | 6.22e-12 | 5 |