FFCP PHASE1:Hg19::chr1:173174630..173174644,-: Difference between revisions
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|id=chr1:173174630..173174644,-
|short_description=p7@TNFSF4
|description=CAGE_peak_7_at_TNFSF4_5end
|association_with_transcript=-18bp_to_ENST00000545292_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7292 | |EntrezGene=7292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11934 | |HGNC=11934 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV74 | |UniProt=Q8IV74 | ||
|association_with_transcript=-18bp_to_ENST00000545292_5end | |||
|cluster_id=chr1:173174630..173174644,- | |||
|coexpression_cluster_id=C725 | |||
|description=CAGE_peak_7_at_TNFSF4_5end | |||
|id=chr1:173174630..173174644,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.20e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.64e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.67e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!1.63e-17!110;UBERON:0000178!5.53e-17!15;UBERON:0000179!5.53e-17!15;UBERON:0000463!5.53e-17!15;UBERON:0001009!1.13e-16!113;UBERON:0001981!4.68e-11!60;UBERON:0007500!4.68e-11!60;UBERON:0004537!4.68e-11!60;UBERON:0006965!4.68e-11!60;UBERON:0004872!8.43e-11!84;UBERON:0000055!2.59e-10!69;UBERON:0001637!1.12e-09!42;UBERON:0003509!1.12e-09!42;UBERON:0004572!1.12e-09!42;UBERON:0002049!7.52e-09!79;UBERON:0007798!7.52e-09!79;UBERON:0000490!1.98e-08!138;UBERON:0003914!2.90e-07!118;UBERON:0003081!4.58e-07!216;UBERON:0002066!6.98e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.73e-35;15!UBERON:0000179;4.73e-35;15!UBERON:0000463;4.73e-35;15!UBERON:0002390;2.88e-17;32!UBERON:0002193;1.91e-08;42!UBERON:0002331;9.47e-08;10!UBERON:0000991;8.27e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.97e-35,15;UBERON:0000179,3.97e-35,15;UBERON:0000463,3.97e-35,15;UBERON:0004535,6.41e-08,109;UBERON:0002331,9.31e-08,10;UBERON:0000358,9.31e-08,10;UBERON:0000307,9.31e-08,10;UBERON:0000091,9.31e-08,10;UBERON:0000087,9.31e-08,10;UBERON:0007010,9.31e-08,10;UBERON:0007806,9.31e-08,10;UBERON:0008780,9.31e-08,10;UBERON:0005728,9.31e-08,10;UBERON:0001009,1.31e-07,112;UBERON:0000991,7.91e-07,21;UBERON:0009196,7.91e-07,21;UBERON:0009117,7.91e-07,21;UBERON:0005564,7.91e-07,21 | |||
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| ||
|short_description=p7@TNFSF4 | |||
}} | }} |
Latest revision as of 17:24, 18 September 2015
Short description: | p7@TNFSF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNFSF4_5end |
Coexpression cluster: | C725_Mast_cord_mycosis_mesenchymal_Endothelial_hepatic_Mesenchymal |
Association with transcript: | -18bp_to_ENST00000545292_5end |
EntrezGene: | TNFSF4 |
HGNC: | 11934 |
UniProt: | Q8IV74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.97e-35 | 15 |
haemolymphatic fluid | 3.97e-35 | 15 |
organism substance | 3.97e-35 | 15 |
cardiovascular system | 6.41e-08 | 109 |
umbilical cord | 9.31e-08 | 10 |
blastocyst | 9.31e-08 | 10 |
blastula | 9.31e-08 | 10 |
bilaminar disc | 9.31e-08 | 10 |
inner cell mass | 9.31e-08 | 10 |
cleaving embryo | 9.31e-08 | 10 |
connecting stalk | 9.31e-08 | 10 |
inner cell mass derived epiblast | 9.31e-08 | 10 |
extraembryonic mesoderm | 9.31e-08 | 10 |
circulatory system | 1.31e-07 | 112 |
gonad | 7.91e-07 | 21 |
indifferent external genitalia | 7.91e-07 | 21 |
indifferent gonad | 7.91e-07 | 21 |
gonad primordium | 7.91e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.67e-10 | 14 |