FFCP PHASE1:Hg19::chr1:176760549..176760561,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:176760549..176760561,+
|short_description=p19@PAPPA2
|description=CAGE_peak_19_at_PAPPA2_5end
|association_with_transcript=-19bp_to_ENST00000479836_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60676 | |EntrezGene=60676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14615 | |HGNC=14615 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000479836_5end | |||
|cluster_id=chr1:176760549..176760561,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_19_at_PAPPA2_5end | |||
|id=chr1:176760549..176760561,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.41e-46!3;CL:0000317!4.34e-09!2;CL:1000448!4.34e-09!2;CL:0002308!4.34e-09!2;CL:0002140!4.34e-09!2;CL:0000054!5.08e-09!2;CL:0000137!5.08e-09!2;CL:0000092!5.08e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.98e-131;3!CL:0000349;5.37e-22;19!CL:0000134;3.68e-09;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.98e-131,3;CL:0000349,5.37e-22,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:201!3.95e-11!6;DOID:0060100!3.95e-11!6;DOID:200!5.08e-09!2;DOID:4305!5.08e-09!2;DOID:4231!6.94e-09!2;DOID:1907!6.94e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.41e-46!3;UBERON:0000920!1.41e-46!3;UBERON:0003124!2.81e-35!7;UBERON:0005631!1.86e-27!14;UBERON:0000158!1.86e-27!14;UBERON:0000478!4.54e-16!24;UBERON:0002419!4.34e-09!2;UBERON:0007771!4.34e-09!2;UBERON:0003297!4.34e-09!2;UBERON:0001821!4.34e-09!2;UBERON:0003487!4.34e-09!2;UBERON:0001820!4.34e-09!2;UBERON:0005089!4.34e-09!2;UBERON:0005088!4.34e-09!2;UBERON:0004923!9.27e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.98e-131;3!UBERON:0000920;8.98e-131;3!UBERON:0005631;2.00e-40;10!UBERON:0000158;2.00e-40;10!UBERON:0000478;1.03e-17;24!UBERON:0004923;8.19e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.98e-131,3;UBERON:0003124,4.76e-57,7;UBERON:0005631,2.55e-29,14;UBERON:0000158,2.55e-29,14;UBERON:0000478,1.03e-17,24;UBERON:0004923,2.96e-07,66 | |||
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|short_description=p19@PAPPA2 | |||
}} | }} |
Latest revision as of 20:25, 18 September 2015
Short description: | p19@PAPPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PAPPA2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -19bp_to_ENST00000479836_5end |
EntrezGene: | PAPPA2 |
HGNC: | 14615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.98e-131 | 3 |
extraembryonic cell | 5.37e-22 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.98e-131 | 3 |
chorion | 4.76e-57 | 7 |
extraembryonic membrane | 2.55e-29 | 14 |
membranous layer | 2.55e-29 | 14 |
extraembryonic structure | 1.03e-17 | 24 |
organ component layer | 2.96e-07 | 66 |