FFCP PHASE1:Hg19::chr1:17846820..17846851,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:17846820..17846851,+
|short_description=p9@ARHGEF10L
|description=CAGE_peak_9_at_ARHGEF10L_5end
|association_with_transcript=0bp_to_AK129959_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55160 | |EntrezGene=55160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25540 | |HGNC=25540 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK129959_5end | |||
|cluster_id=chr1:17846820..17846851,+ | |||
|description=CAGE_peak_9_at_ARHGEF10L_5end | |||
|id=chr1:17846820..17846851,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.64e-14!254;CL:0002076!7.85e-14!43;CL:0000223!2.34e-09!59;CL:0002251!6.56e-08!21;CL:0000622!1.39e-07!5;CL:0000244!2.87e-07!4;CL:0000731!2.87e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.20e-12;19!CL:0002577;4.70e-10;3!CL:0002536;1.25e-07;2!CL:0002537;4.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.89e-13,19;CL:0002577,2.48e-10,3;CL:0002536,9.43e-08,2;CL:0002537,3.94e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.46e-08!25;DOID:305!2.29e-07!106;DOID:5093!5.07e-07!4;DOID:1612!5.07e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.96e-08;4!DOID:1612;3.96e-08;4!DOID:299;5.72e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.17e-08,4;DOID:1612,6.17e-08,4;DOID:299,6.46e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.32e-15!169;UBERON:0000925!1.32e-15!169;UBERON:0006595!1.32e-15!169;UBERON:0000161!4.15e-14!35;UBERON:0005631!1.07e-11!14;UBERON:0000158!1.07e-11!14;UBERON:0001008!3.27e-11!45;UBERON:0000166!3.66e-11!21;UBERON:0001044!2.23e-10!6;UBERON:0003293!2.23e-10!6;UBERON:0003294!2.23e-10!6;UBERON:0010047!2.23e-10!6;UBERON:0000167!2.23e-10!6;UBERON:0000077!2.69e-10!130;UBERON:0006554!3.11e-10!44;UBERON:0001007!1.81e-09!155;UBERON:0001555!1.81e-09!155;UBERON:0007026!1.81e-09!155;UBERON:0004175!9.63e-09!25;UBERON:0000165!1.06e-08!28;UBERON:0000930!1.06e-08!28;UBERON:0000365!3.95e-08!5;UBERON:0004921!5.51e-08!129;UBERON:0004185!5.51e-08!129;UBERON:0001987!1.00e-07!4;UBERON:0004340!1.00e-07!4;UBERON:0003408!1.57e-07!10;UBERON:0001004!2.60e-07!72;UBERON:0003102!2.64e-07!95;UBERON:0002294!2.94e-07!7;UBERON:0001173!2.94e-07!7;UBERON:0004912!2.94e-07!7;UBERON:0000305!6.88e-07!7;UBERON:0005156!6.91e-07!59;UBERON:0000990!6.91e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.29e-13;4!UBERON:0000305;1.93e-12;7!UBERON:0000478;5.01e-12;24!UBERON:0005631;6.60e-12;10!UBERON:0000158;6.60e-12;10!UBERON:0001044;6.30e-10;6!UBERON:0003293;6.30e-10;6!UBERON:0003294;6.30e-10;6!UBERON:0010047;6.30e-10;6!UBERON:0003408;6.30e-10;6!UBERON:0000167;6.30e-10;6!UBERON:0001041;1.38e-08;14!UBERON:0001829;3.08e-08;2!UBERON:0000165;8.68e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.86e-22,14;UBERON:0000158,1.86e-22,14;UBERON:0001987,1.94e-13,4;UBERON:0004340,1.94e-13,4;UBERON:0000305,1.55e-12,7;UBERON:0000478,3.23e-12,24;UBERON:0003124,1.38e-11,7;UBERON:0004871,6.41e-11,8;UBERON:0001044,6.48e-10,6;UBERON:0003293,6.48e-10,6;UBERON:0003294,6.48e-10,6;UBERON:0010047,6.48e-10,6;UBERON:0000167,6.48e-10,6;UBERON:0000161,1.85e-09,36;UBERON:0004175,3.11e-09,25;UBERON:0000166,5.48e-09,22;UBERON:0007023,5.87e-09,114;UBERON:0001008,1.02e-08,48;UBERON:0001829,3.15e-08,2;UBERON:0004119,1.40e-07,160;UBERON:0000925,1.40e-07,160;UBERON:0006595,1.40e-07,160;UBERON:0006554,1.69e-07,47 | |||
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| ||
|short_description=p9@ARHGEF10L | |||
}} | }} |
Latest revision as of 21:31, 18 September 2015
Short description: | p9@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ARHGEF10L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK129959_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.89e-13 | 19 |
placental epithelial cell | 2.48e-10 | 3 |
amniotic epithelial cell | 9.43e-08 | 2 |
amnion mesenchymal stem cell | 3.94e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.86e-22 | 14 |
membranous layer | 1.86e-22 | 14 |
placenta | 1.94e-13 | 4 |
allantois | 1.94e-13 | 4 |
amnion | 1.55e-12 | 7 |
extraembryonic structure | 3.23e-12 | 24 |
chorion | 1.38e-11 | 7 |
somatic layer of lateral plate mesoderm | 6.41e-11 | 8 |
saliva-secreting gland | 6.48e-10 | 6 |
gland of oral region | 6.48e-10 | 6 |
gland of foregut | 6.48e-10 | 6 |
oral gland | 6.48e-10 | 6 |
oral cavity | 6.48e-10 | 6 |
orifice | 1.85e-09 | 36 |
internal genitalia | 3.11e-09 | 25 |
oral opening | 5.48e-09 | 22 |
adult organism | 5.87e-09 | 114 |
renal system | 1.02e-08 | 48 |
major salivary gland | 3.15e-08 | 2 |
endoderm-derived structure | 1.40e-07 | 160 |
endoderm | 1.40e-07 | 160 |
presumptive endoderm | 1.40e-07 | 160 |
urinary system structure | 1.69e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.17e-08 | 4 |
breast cancer | 6.17e-08 | 4 |
adenocarcinoma | 6.46e-07 | 25 |