FFCP PHASE1:Hg19::chr19:55315087..55315100,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100287534,3805 | |EntrezGene=100287534,3805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6332 | |HGNC=6332 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000345540,ENST00000357494,ENST00000396293,ENST00000463062,ENST00000486965_5end | |association_with_transcript=0bp_to_ENST00000345540,ENST00000357494,ENST00000396293,ENST00000463062,ENST00000486965_5end | ||
|cluster_id=chr19:55315087..55315100,+ | |||
|description=CAGE_peak_2_at_KIR2DL4_5end | |description=CAGE_peak_2_at_KIR2DL4_5end | ||
|id=chr19:55315087..55315100,+ | |id=chr19:55315087..55315100,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.32e-15!140;CL:0000623!2.71e-13!3;CL:0000825!2.71e-13!3;CL:0002087!1.02e-12!119;CL:0000842!2.47e-12!3;CL:0000037!7.79e-11!172;CL:0000566!7.79e-11!172;CL:0000988!6.91e-10!182;CL:0002031!1.20e-09!124;CL:0000224!2.33e-09!4;CL:0002032!1.35e-08!165;CL:0000837!1.35e-08!165;CL:0000625!2.19e-08!11;CL:0000791!3.93e-07!18;CL:0000789!3.93e-07!18;CL:0002420!3.93e-07!18;CL:0002419!3.93e-07!18;CL:0000790!3.93e-07!18;CL:0000084!9.85e-07!25;CL:0000827!9.85e-07!25 | |ontology_enrichment_celltype=CL:0000738!8.32e-15!140;CL:0000623!2.71e-13!3;CL:0000825!2.71e-13!3;CL:0002087!1.02e-12!119;CL:0000842!2.47e-12!3;CL:0000037!7.79e-11!172;CL:0000566!7.79e-11!172;CL:0000988!6.91e-10!182;CL:0002031!1.20e-09!124;CL:0000224!2.33e-09!4;CL:0002032!1.35e-08!165;CL:0000837!1.35e-08!165;CL:0000625!2.19e-08!11;CL:0000791!3.93e-07!18;CL:0000789!3.93e-07!18;CL:0002420!3.93e-07!18;CL:0002419!3.93e-07!18;CL:0000790!3.93e-07!18;CL:0000084!9.85e-07!25;CL:0000827!9.85e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000767;1.08e-33;3!CL:0000623;1.08e-33;3!CL:0002127;2.78e-26;1!CL:0000911;2.78e-26;1!CL:0000814;2.78e-26;1!CL:0000094;2.49e-13;8!CL:0000081;5.79e-10;11!CL:0000084;1.17e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,9.10e-34,3;CL:0000623,9.10e-34,3;CL:0000825,9.10e-34,3;CL:0002127,2.78e-26,1;CL:0000914,2.78e-26,1;CL:0000911,2.78e-26,1;CL:0000814,2.78e-26,1;CL:0002042,2.78e-26,1;CL:0002039,2.78e-26,1;CL:0002040,2.78e-26,1;CL:0002041,2.78e-26,1;CL:0000893,7.30e-14,2;CL:0002489,7.30e-14,2;CL:0000809,7.30e-14,2;CL:0000808,7.30e-14,2;CL:0000894,7.30e-14,2;CL:0000806,7.30e-14,2;CL:0000807,7.30e-14,2;CL:0000805,7.30e-14,2;CL:0002425,7.30e-14,2;CL:0000094,2.34e-13,8;CL:0000838,3.48e-12,52;CL:0000542,5.85e-12,53;CL:0000051,5.85e-12,53;CL:0000081,5.54e-10,11;CL:0000084,1.20e-09,25;CL:0000827,1.20e-09,25;CL:0000738,7.15e-09,136;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.59e-07,168;CL:0000988,8.41e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002425;7.30e-14;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.78e-14!7;UBERON:0002390!1.35e-12!102;UBERON:0003061!1.35e-12!102;UBERON:0002193!3.02e-12!112;UBERON:0002370!5.59e-09!4;UBERON:0005058!5.59e-09!4;UBERON:0009113!5.59e-09!4;UBERON:0003295!5.59e-09!4;UBERON:0005562!5.59e-09!4 | |ontology_enrichment_uberon=UBERON:0004177!8.78e-14!7;UBERON:0002390!1.35e-12!102;UBERON:0003061!1.35e-12!102;UBERON:0002193!3.02e-12!112;UBERON:0002370!5.59e-09!4;UBERON:0005058!5.59e-09!4;UBERON:0009113!5.59e-09!4;UBERON:0003295!5.59e-09!4;UBERON:0005562!5.59e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.30e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.29e-15,7;UBERON:0005057,3.29e-15,7;UBERON:0002106,1.41e-09,3;UBERON:0004854,1.41e-09,3;UBERON:0009034,1.41e-09,3;UBERON:0002095,1.41e-09,3;UBERON:0004782,1.41e-09,3;UBERON:0003281,1.41e-09,3;UBERON:0009664,1.41e-09,3;UBERON:0002296,1.41e-09,3;UBERON:0005602,1.41e-09,3;UBERON:0001179,1.41e-09,3;UBERON:0006293,1.41e-09,3;UBERON:0002370,1.40e-07,4;UBERON:0005058,1.40e-07,4;UBERON:0009113,1.40e-07,4;UBERON:0003295,1.40e-07,4;UBERON:0005562,1.40e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0,1.54816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,1.24930726552346,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.329365839288,2.56139988262505,0.862510299438069,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3491138123675,0,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0,0,0,2.06764619555678,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0,1.54816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0.689491361473237,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,1.24930726552346,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.329365839288,2.56139988262505,0.862510299438069,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3491138123675,0,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0,0,0,2.06764619555678,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p2@KIR2DL4 | |short_description=p2@KIR2DL4 | ||
}} | }} |
Latest revision as of 23:10, 19 September 2015
Short description: | p2@KIR2DL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIR2DL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000345540, ENST00000357494, ENST00000396293, ENST00000463062, ENST00000486965_5end |
EntrezGene: | 100287534,3805 |
HGNC: | 6332 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 9.10e-34 | 3 |
natural killer cell | 9.10e-34 | 3 |
pro-NK cell | 9.10e-34 | 3 |
innate effector T cell | 2.78e-26 | 1 |
immature NK T cell | 2.78e-26 | 1 |
effector T cell | 2.78e-26 | 1 |
mature NK T cell | 2.78e-26 | 1 |
immature NK T cell stage IV | 2.78e-26 | 1 |
immature NK T cell stage I | 2.78e-26 | 1 |
immature NK T cell stage II | 2.78e-26 | 1 |
immature NK T cell stage III | 2.78e-26 | 1 |
thymocyte | 7.30e-14 | 2 |
double negative thymocyte | 7.30e-14 | 2 |
double-positive, alpha-beta thymocyte | 7.30e-14 | 2 |
DN4 thymocyte | 7.30e-14 | 2 |
DN1 thymic pro-T cell | 7.30e-14 | 2 |
DN2 thymocyte | 7.30e-14 | 2 |
DN3 thymocyte | 7.30e-14 | 2 |
immature single positive thymocyte | 7.30e-14 | 2 |
early T lineage precursor | 7.30e-14 | 2 |
granulocyte | 2.34e-13 | 8 |
lymphoid lineage restricted progenitor cell | 3.48e-12 | 52 |
lymphocyte | 5.85e-12 | 53 |
common lymphoid progenitor | 5.85e-12 | 53 |
blood cell | 5.54e-10 | 11 |
T cell | 1.20e-09 | 25 |
pro-T cell | 1.20e-09 | 25 |
leukocyte | 7.15e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 3.59e-07 | 168 |
hematopoietic cell | 8.41e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.29e-15 | 7 |
immune organ | 3.29e-15 | 7 |
spleen | 1.41e-09 | 3 |
gastrointestinal system mesentery | 1.41e-09 | 3 |
stomach region | 1.41e-09 | 3 |
mesentery | 1.41e-09 | 3 |
gastrointestinal system serosa | 1.41e-09 | 3 |
mesentery of stomach | 1.41e-09 | 3 |
gut mesentery | 1.41e-09 | 3 |
dorsal mesentery | 1.41e-09 | 3 |
dorsal mesogastrium | 1.41e-09 | 3 |
peritoneal cavity | 1.41e-09 | 3 |
spleen primordium | 1.41e-09 | 3 |
thymus | 1.40e-07 | 4 |
hemolymphoid system gland | 1.40e-07 | 4 |
thymic region | 1.40e-07 | 4 |
pharyngeal gland | 1.40e-07 | 4 |
thymus primordium | 1.40e-07 | 4 |