FFCP PHASE1:Hg19::chr3:42623743..42623756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9117 | |EntrezGene=9117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16828 | |HGNC=16828 | ||
|TSSclassifier=strong | |||
|UniProt=C9J448 | |UniProt=C9J448 | ||
|association_with_transcript=62bp_to_ENST00000456515_5end | |association_with_transcript=62bp_to_ENST00000456515_5end | ||
|cluster_id=chr3:42623743..42623756,- | |||
|coexpression_cluster_id=C4328 | |coexpression_cluster_id=C4328 | ||
|description=CAGE_peak_4_at_SEC22C_5end | |description=CAGE_peak_4_at_SEC22C_5end | ||
|id=chr3:42623743..42623756,- | |id=chr3:42623743..42623756,- | ||
|ontology_enrichment_celltype=CL:0000766!5.10e-23!76;CL:0000839!9.21e-23!70;CL:0000763!8.21e-22!112;CL:0000049!8.21e-22!112;CL:0000557!1.51e-21!71;CL:0000037!5.24e-20!172;CL:0000566!5.24e-20!172;CL:0000738!8.05e-20!140;CL:0002032!1.69e-19!165;CL:0000837!1.69e-19!165;CL:0002031!2.75e-19!124;CL:0002009!3.45e-19!65;CL:0000988!4.69e-19!182;CL:0002057!8.10e-19!42;CL:0000860!9.44e-19!45;CL:0002194!2.96e-18!63;CL:0000576!2.96e-18!63;CL:0000040!2.96e-18!63;CL:0000559!2.96e-18!63;CL:0002087!1.48e-15!119 | |ontology_enrichment_celltype=CL:0000766!5.10e-23!76;CL:0000839!9.21e-23!70;CL:0000763!8.21e-22!112;CL:0000049!8.21e-22!112;CL:0000557!1.51e-21!71;CL:0000037!5.24e-20!172;CL:0000566!5.24e-20!172;CL:0000738!8.05e-20!140;CL:0002032!1.69e-19!165;CL:0000837!1.69e-19!165;CL:0002031!2.75e-19!124;CL:0002009!3.45e-19!65;CL:0000988!4.69e-19!182;CL:0002057!8.10e-19!42;CL:0000860!9.44e-19!45;CL:0002194!2.96e-18!63;CL:0000576!2.96e-18!63;CL:0000040!2.96e-18!63;CL:0000559!2.96e-18!63;CL:0002087!1.48e-15!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-21;33!CL:0002057;1.66e-21;33!CL:0000473;1.55e-20;39!CL:0000234;1.55e-20;39!CL:0000766;9.26e-18;69!CL:0000576;5.47e-16;48!CL:0000763;8.92e-11;100!CL:0000624;7.74e-09;6!CL:0002087;1.28e-08;104!CL:0000097;3.36e-08;5!CL:0000738;3.69e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-37,72;CL:0000839,1.13e-35,66;CL:0000738,1.25e-34,136;CL:0000473,2.14e-34,48;CL:0000234,2.14e-34,48;CL:0000557,3.08e-34,67;CL:0000037,4.68e-34,168;CL:0000763,1.22e-33,108;CL:0000049,1.22e-33,108;CL:0000988,1.55e-33,177;CL:0002032,2.95e-33,161;CL:0000837,2.95e-33,161;CL:0002031,3.60e-33,120;CL:0000860,4.35e-31,42;CL:0002057,4.35e-31,42;CL:0002009,3.38e-29,61;CL:0002194,1.68e-27,59;CL:0000576,1.68e-27,59;CL:0000040,1.68e-27,59;CL:0000559,1.68e-27,59;CL:0002087,9.72e-27,115;CL:0002393,7.79e-09,9;CL:0002397,7.79e-09,9;CL:0000624,7.88e-09,6;CL:0000134,1.12e-08,354;CL:0000219,2.22e-08,386;CL:0000097,3.46e-08,5;CL:0002028,3.46e-08,5;CL:0002320,4.86e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.31e-23;42!CL:0000049;1.21e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-18!102;UBERON:0003061!1.27e-18!102;UBERON:0002193!2.68e-18!112;UBERON:0002371!1.49e-17!80;UBERON:0001474!7.10e-15!86;UBERON:0002405!1.20e-12!115;UBERON:0004765!4.91e-12!101;UBERON:0001434!4.91e-12!101 | |ontology_enrichment_uberon=UBERON:0002390!1.27e-18!102;UBERON:0003061!1.27e-18!102;UBERON:0002193!2.68e-18!112;UBERON:0002371!1.49e-17!80;UBERON:0001474!7.10e-15!86;UBERON:0002405!1.20e-12!115;UBERON:0004765!4.91e-12!101;UBERON:0001434!4.91e-12!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.97e-29,76;UBERON:0002390,2.38e-27,98;UBERON:0003061,2.38e-27,98;UBERON:0001474,7.89e-26,82;UBERON:0002193,7.10e-25,108;UBERON:0004765,2.26e-24,90;UBERON:0002405,6.02e-24,93;UBERON:0001434,3.49e-20,100;UBERON:0003081,1.90e-09,203;UBERON:0002204,3.18e-09,167;UBERON:0002384,7.54e-08,371 | |||
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|short_description=p4@SEC22C | |short_description=p4@SEC22C | ||
}} | }} |
Latest revision as of 06:14, 18 September 2015
Short description: | p4@SEC22C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC22C_5end |
Coexpression cluster: | C4328_Reticulocytes_Mast_small_Melanocyte_CD4_CD19_Macrophage |
Association with transcript: | 62bp_to_ENST00000456515_5end |
EntrezGene: | SEC22C |
HGNC: | 16828 |
UniProt: | C9J448 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.97e-29 | 76 |
hematopoietic system | 2.38e-27 | 98 |
blood island | 2.38e-27 | 98 |
bone element | 7.89e-26 | 82 |
hemolymphoid system | 7.10e-25 | 108 |
skeletal element | 2.26e-24 | 90 |
immune system | 6.02e-24 | 93 |
skeletal system | 3.49e-20 | 100 |
lateral plate mesoderm | 1.90e-09 | 203 |
musculoskeletal system | 3.18e-09 | 167 |
connective tissue | 7.54e-08 | 371 |