FFCP PHASE1:Hg19::chr9:139871948..139871964,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5730 | |EntrezGene=5730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9592 | |HGNC=9592 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7I2,P41222,Q5SQ11 | |UniProt=F8W7I2,P41222,Q5SQ11 | ||
|association_with_transcript=0bp_to_ENST00000224167,ENST00000371625,ENST00000457950,NM_000954_5end | |association_with_transcript=0bp_to_ENST00000224167,ENST00000371625,ENST00000457950,NM_000954_5end | ||
|cluster_id=chr9:139871948..139871964,+ | |||
|coexpression_cluster_id=C485 | |coexpression_cluster_id=C485 | ||
|description=CAGE_peak_1_at_PTGDS_5end | |description=CAGE_peak_1_at_PTGDS_5end | ||
|id=chr9:139871948..139871964,+ | |id=chr9:139871948..139871964,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.51e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-53!115;UBERON:0002616!2.61e-27!59;UBERON:0001049!7.30e-27!57;UBERON:0005068!7.30e-27!57;UBERON:0006241!7.30e-27!57;UBERON:0007135!7.30e-27!57;UBERON:0005743!3.52e-25!86;UBERON:0003075!6.75e-25!86;UBERON:0007284!6.75e-25!86;UBERON:0000955!6.24e-24!69;UBERON:0006238!6.24e-24!69;UBERON:0002346!3.57e-23!90;UBERON:0001017!4.18e-23!82;UBERON:0000073!9.40e-22!94;UBERON:0001016!9.40e-22!94;UBERON:0003080!7.41e-20!42;UBERON:0002780!9.35e-20!41;UBERON:0001890!9.35e-20!41;UBERON:0006240!9.35e-20!41;UBERON:0003056!6.02e-17!61;UBERON:0001893!1.83e-16!34;UBERON:0002020!2.15e-16!34;UBERON:0003528!2.15e-16!34;UBERON:0002791!7.21e-16!33;UBERON:0001869!3.68e-15!32;UBERON:0000033!4.09e-15!123;UBERON:0000153!5.27e-15!129;UBERON:0007811!5.27e-15!129;UBERON:0002619!2.05e-13!22;UBERON:0004121!1.01e-12!169;UBERON:0001950!2.57e-12!20;UBERON:0000924!4.28e-12!173;UBERON:0006601!4.28e-12!173;UBERON:0000956!3.31e-11!25;UBERON:0000203!3.31e-11!25;UBERON:0000062!2.92e-10!511;UBERON:0000468!9.46e-10!659;UBERON:0000479!3.96e-09!787;UBERON:0003076!3.67e-08!15;UBERON:0003057!3.67e-08!15;UBERON:0000475!4.57e-08!365;UBERON:0000467!1.36e-07!625;UBERON:0000480!2.15e-07!626;UBERON:0004732!5.21e-07!13;UBERON:0002308!7.79e-07!9;UBERON:0000125!7.79e-07!9;UBERON:0000922!7.86e-07!612;UBERON:0002420!9.36e-07!9;UBERON:0007245!9.36e-07!9;UBERON:0010009!9.36e-07!9;UBERON:0010011!9.36e-07!9;UBERON:0000454!9.36e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!2.75e-53!115;UBERON:0002616!2.61e-27!59;UBERON:0001049!7.30e-27!57;UBERON:0005068!7.30e-27!57;UBERON:0006241!7.30e-27!57;UBERON:0007135!7.30e-27!57;UBERON:0005743!3.52e-25!86;UBERON:0003075!6.75e-25!86;UBERON:0007284!6.75e-25!86;UBERON:0000955!6.24e-24!69;UBERON:0006238!6.24e-24!69;UBERON:0002346!3.57e-23!90;UBERON:0001017!4.18e-23!82;UBERON:0000073!9.40e-22!94;UBERON:0001016!9.40e-22!94;UBERON:0003080!7.41e-20!42;UBERON:0002780!9.35e-20!41;UBERON:0001890!9.35e-20!41;UBERON:0006240!9.35e-20!41;UBERON:0003056!6.02e-17!61;UBERON:0001893!1.83e-16!34;UBERON:0002020!2.15e-16!34;UBERON:0003528!2.15e-16!34;UBERON:0002791!7.21e-16!33;UBERON:0001869!3.68e-15!32;UBERON:0000033!4.09e-15!123;UBERON:0000153!5.27e-15!129;UBERON:0007811!5.27e-15!129;UBERON:0002619!2.05e-13!22;UBERON:0004121!1.01e-12!169;UBERON:0001950!2.57e-12!20;UBERON:0000924!4.28e-12!173;UBERON:0006601!4.28e-12!173;UBERON:0000956!3.31e-11!25;UBERON:0000203!3.31e-11!25;UBERON:0000062!2.92e-10!511;UBERON:0000468!9.46e-10!659;UBERON:0000479!3.96e-09!787;UBERON:0003076!3.67e-08!15;UBERON:0003057!3.67e-08!15;UBERON:0000475!4.57e-08!365;UBERON:0000467!1.36e-07!625;UBERON:0000480!2.15e-07!626;UBERON:0004732!5.21e-07!13;UBERON:0002308!7.79e-07!9;UBERON:0000125!7.79e-07!9;UBERON:0000922!7.86e-07!612;UBERON:0002420!9.36e-07!9;UBERON:0007245!9.36e-07!9;UBERON:0010009!9.36e-07!9;UBERON:0010011!9.36e-07!9;UBERON:0000454!9.36e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.35e-15;114!UBERON:0002780;2.36e-14;41!UBERON:0001890;2.36e-14;41!UBERON:0000073;2.36e-14;53!UBERON:0002616;2.36e-14;53!UBERON:0002619;5.55e-14;22!UBERON:0001893;9.18e-14;34!UBERON:0003528;1.36e-13;34!UBERON:0002020;1.36e-13;34!UBERON:0002791;2.49e-13;32!UBERON:0001869;2.69e-13;32!UBERON:0001950;7.87e-13;20!UBERON:0001017;8.81e-12;75!UBERON:0000955;8.13e-11;68!UBERON:0000956;9.84e-11;25!UBERON:0000203;9.84e-11;25!UBERON:0001016;1.42e-08;83!UBERON:0004732;2.93e-07;13!UBERON:0000125;4.35e-07;9!UBERON:0002308;4.35e-07;9!UBERON:0002420;5.27e-07;9!UBERON:0007245;5.27e-07;9!UBERON:0010009;5.27e-07;9!UBERON:0010011;5.27e-07;9!UBERON:0000454;5.27e-07;9 | |||
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| ||
|short_description=p1@PTGDS | |short_description=p1@PTGDS | ||
}} | }} |
Latest revision as of 14:31, 16 September 2015
Short description: | p1@PTGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTGDS_5end |
Coexpression cluster: | C485_Pericytes_retina_cerebral_Dendritic_testis_corpus_spinal |
Association with transcript: | 0bp_to_ENST00000224167, ENST00000371625, ENST00000457950, NM_000954_5end |
EntrezGene: | PTGDS |
HGNC: | 9592 |
UniProt: | F8W7I2P41222Q5SQ11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data