FFCP PHASE1:Hg19::chr1:193446119..193446130,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:193446119..193446130,+
|short_description=p@chr1:193446119..193446130,+
|description=CAGE_peak_at_chr1:193446119..193446130,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:193446119..193446130,+ | |||
|description=CAGE_peak_at_chr1:193446119..193446130,+ | |||
|id=chr1:193446119..193446130,+ | |||
|ontology_enrichment_celltype=CL:0000542!6.68e-35!53;CL:0000051!6.68e-35!53;CL:0000838!5.33e-32!52;CL:0000791!6.91e-23!18;CL:0000789!6.91e-23!18;CL:0002420!6.91e-23!18;CL:0002419!6.91e-23!18;CL:0000790!6.91e-23!18;CL:0000084!1.23e-19!25;CL:0000827!1.23e-19!25;CL:0000624!7.90e-15!6;CL:0002087!1.77e-14!119;CL:0000945!2.35e-12!24;CL:0000826!2.35e-12!24;CL:0002031!3.07e-12!124;CL:0000815!3.73e-12!2;CL:0000792!3.73e-12!2;CL:0002677!3.73e-12!2;CL:0000738!1.24e-11!140;CL:0000785!1.76e-11!2;CL:0000955!1.76e-11!2;CL:0000818!1.76e-11!2;CL:0000954!1.76e-11!2;CL:0000816!1.76e-11!2;CL:0002032!3.38e-09!165;CL:0000837!3.38e-09!165;CL:0000988!6.81e-09!182;CL:0000037!1.21e-08!172;CL:0000566!1.21e-08!172;CL:0000898!2.24e-08!3;CL:0000625!6.09e-08!11;CL:0000817!6.21e-08!3;CL:0002127!5.58e-07!1;CL:0000914!5.58e-07!1;CL:0000911!5.58e-07!1;CL:0000814!5.58e-07!1;CL:0002042!5.58e-07!1;CL:0002039!5.58e-07!1;CL:0002040!5.58e-07!1;CL:0002041!5.58e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.46e-50;1!CL:0000911;1.46e-50;1!CL:0000814;1.46e-50;1!CL:0000815;7.14e-26;2!CL:0000792;7.14e-26;2!CL:0002677;7.14e-26;2!CL:0000898;9.46e-18;3!CL:0000791;4.31e-12;18!CL:0000789;4.31e-12;18!CL:0002419;4.31e-12;18!CL:0000624;1.44e-09;6!CL:0000084;5.27e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.46e-50,1;CL:0000914,1.46e-50,1;CL:0000911,1.46e-50,1;CL:0000814,1.46e-50,1;CL:0002042,1.46e-50,1;CL:0002039,1.46e-50,1;CL:0002040,1.46e-50,1;CL:0002041,1.46e-50,1;CL:0000893,4.32e-26,2;CL:0002489,4.32e-26,2;CL:0000809,4.32e-26,2;CL:0000808,4.32e-26,2;CL:0000894,4.32e-26,2;CL:0000806,4.32e-26,2;CL:0000807,4.32e-26,2;CL:0000805,4.32e-26,2;CL:0002425,4.32e-26,2;CL:0000815,7.14e-26,2;CL:0000792,7.14e-26,2;CL:0002677,7.14e-26,2;CL:0000898,9.46e-18,3;CL:0000791,4.31e-12,18;CL:0000789,4.31e-12,18;CL:0002420,4.31e-12,18;CL:0002419,4.31e-12,18;CL:0000790,4.31e-12,18;CL:0000624,1.44e-09,6;CL:0000084,5.27e-09,25;CL:0000827,5.27e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002425;4.32e-26;2!CL:0000790;4.31e-12;18 | |||
|ontology_enrichment_disease=DOID:0060058!4.71e-18!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!9.72e-08!3;UBERON:0004854!9.72e-08!3;UBERON:0009034!9.72e-08!3;UBERON:0002095!9.72e-08!3;UBERON:0004782!9.72e-08!3;UBERON:0003281!9.72e-08!3;UBERON:0009664!9.72e-08!3;UBERON:0002296!9.72e-08!3;UBERON:0005602!9.72e-08!3;UBERON:0001179!9.72e-08!3;UBERON:0006293!9.72e-08!3;UBERON:0004177!2.58e-07!7;UBERON:0002171!9.15e-07!1;UBERON:0006518!9.15e-07!1;UBERON:0008949!9.15e-07!1;UBERON:0000101!9.15e-07!1;UBERON:0002167!9.15e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.82e-14,4;UBERON:0005058,8.82e-14,4;UBERON:0009113,8.82e-14,4;UBERON:0003295,8.82e-14,4;UBERON:0005562,8.82e-14,4;UBERON:0003351,1.22e-09,6;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7 | |||
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|short_description=p@chr1:193446119..193446130,+ | |||
}} | }} |
Latest revision as of 01:44, 28 July 2015
Short description: | p@chr1:193446119..193446130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:193446119..193446130, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.46e-50 | 1 |
immature NK T cell | 1.46e-50 | 1 |
effector T cell | 1.46e-50 | 1 |
mature NK T cell | 1.46e-50 | 1 |
immature NK T cell stage IV | 1.46e-50 | 1 |
immature NK T cell stage I | 1.46e-50 | 1 |
immature NK T cell stage II | 1.46e-50 | 1 |
immature NK T cell stage III | 1.46e-50 | 1 |
thymocyte | 4.32e-26 | 2 |
double negative thymocyte | 4.32e-26 | 2 |
double-positive, alpha-beta thymocyte | 4.32e-26 | 2 |
DN4 thymocyte | 4.32e-26 | 2 |
DN1 thymic pro-T cell | 4.32e-26 | 2 |
DN2 thymocyte | 4.32e-26 | 2 |
DN3 thymocyte | 4.32e-26 | 2 |
immature single positive thymocyte | 4.32e-26 | 2 |
early T lineage precursor | 4.32e-26 | 2 |
regulatory T cell | 7.14e-26 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.14e-26 | 2 |
naive regulatory T cell | 7.14e-26 | 2 |
naive T cell | 9.46e-18 | 3 |
mature alpha-beta T cell | 4.31e-12 | 18 |
alpha-beta T cell | 4.31e-12 | 18 |
immature T cell | 4.31e-12 | 18 |
mature T cell | 4.31e-12 | 18 |
immature alpha-beta T cell | 4.31e-12 | 18 |
CD4-positive, alpha-beta T cell | 1.44e-09 | 6 |
T cell | 5.27e-09 | 25 |
pro-T cell | 5.27e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.82e-14 | 4 |
hemolymphoid system gland | 8.82e-14 | 4 |
thymic region | 8.82e-14 | 4 |
pharyngeal gland | 8.82e-14 | 4 |
thymus primordium | 8.82e-14 | 4 |
pharyngeal epithelium | 1.22e-09 | 6 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |