FFCP PHASE1:Hg19::chr12:19928380..19928401,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535764_5end | |association_with_transcript=0bp_to_ENST00000535764_5end | ||
|cluster_id=chr12:19928380..19928401,+ | |||
|coexpression_cluster_id=C230 | |coexpression_cluster_id=C230 | ||
|description=CAGE_peak_1_at_ENST00000535764_5end | |description=CAGE_peak_1_at_ENST00000535764_5end | ||
|id=chr12:19928380..19928401,+ | |id=chr12:19928380..19928401,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.09e-13!7;CL:0000586!1.09e-13!7;CL:1000415!2.03e-09!2 | |ontology_enrichment_celltype=CL:0000039!1.09e-13!7;CL:0000586!1.09e-13!7;CL:1000415!2.03e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.37e-24;2!CL:0000319;1.82e-13;1!CL:0000159;2.28e-07;2!CL:0000054;2.74e-07;2!CL:0000137;2.74e-07;2!CL:0000092;2.74e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.29e-24,2;CL:0000319,1.82e-13,1;CL:0000159,2.28e-07,2;CL:0000054,2.58e-07,2;CL:0000137,2.58e-07,2;CL:0000092,2.58e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.15e-13;1!UBERON:0005425;8.15e-13;1!UBERON:0004872;1.11e-07;7!UBERON:0006965;2.15e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.82e-13;1!DOID:0060085;2.62e-13;1!DOID:3165;2.62e-13;1!DOID:0060121;2.62e-13;1!DOID:2438;2.62e-13;1!DOID:4418;2.62e-13;1!DOID:200;2.74e-07;2!DOID:4305;2.74e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.82e-13,1;DOID:0060085,2.32e-13,1;DOID:3165,2.32e-13,1;DOID:0060121,2.32e-13,1;DOID:2438,2.32e-13,1;DOID:4418,2.32e-13,1;DOID:305,7.83e-10,106;DOID:200,2.58e-07,2;DOID:4305,2.58e-07,2;DOID:0050687,6.05e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-11!115;UBERON:0002081!6.47e-09!2 | |ontology_enrichment_uberon=UBERON:0007023!1.42e-11!115;UBERON:0002081!6.47e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;9.63e-17;3!UBERON:0002294;6.62e-16;7!UBERON:0001173;6.62e-16;7!UBERON:0001282;2.05e-13;1!UBERON:0009842;2.05e-13;1!UBERON:0003704;2.05e-13;1!UBERON:0001171;2.05e-13;1!UBERON:0001172;2.05e-13;1!UBERON:0002146;2.62e-13;1!UBERON:0005623;2.62e-13;1!UBERON:0000941;8.15e-13;1!UBERON:0001785;8.15e-13;1!UBERON:0002464;8.15e-13;1!UBERON:0004904;8.15e-13;1!UBERON:0001021;8.15e-13;1!UBERON:0003714;4.83e-07;2!UBERON:0005162;4.83e-07;2!UBERON:0000122;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,9.26e-17,3;UBERON:0006242,9.26e-17,3;UBERON:0001282,2.06e-13,1;UBERON:0009842,2.06e-13,1;UBERON:0003704,2.06e-13,1;UBERON:0001171,2.06e-13,1;UBERON:0001172,2.06e-13,1;UBERON:0002146,2.95e-13,1;UBERON:0005623,2.95e-13,1;UBERON:0000941,8.64e-13,1;UBERON:0001785,8.64e-13,1;UBERON:0002464,8.64e-13,1;UBERON:0004904,8.64e-13,1;UBERON:0001021,8.64e-13,1;UBERON:0003902,8.64e-13,1;UBERON:0005425,8.64e-13,1;UBERON:0002294,1.63e-12,9;UBERON:0001173,1.63e-12,9;UBERON:0004912,1.63e-12,9;UBERON:0003124,1.80e-07,7;UBERON:0003714,4.98e-07,2;UBERON:0005162,4.98e-07,2;UBERON:0000122,4.98e-07,2 | |||
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| ||
|short_description=p1@ENST00000535764 | |short_description=p1@ENST00000535764 | ||
}} | }} |
Latest revision as of 07:25, 24 July 2015
Short description: | p1@ENST00000535764 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000535764_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | 0bp_to_ENST00000535764_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.29e-24 | 2 |
mucus secreting cell | 1.82e-13 | 1 |
seromucus secreting cell | 2.28e-07 | 2 |
bone matrix secreting cell | 2.58e-07 | 2 |
osteocyte | 2.58e-07 | 2 |
osteoclast | 2.58e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 9.26e-17 | 3 |
gall bladder primordium | 9.26e-17 | 3 |
intralobular bile duct | 2.06e-13 | 1 |
acinus | 2.06e-13 | 1 |
intrahepatic bile duct | 2.06e-13 | 1 |
portal lobule | 2.06e-13 | 1 |
hepatic acinus | 2.06e-13 | 1 |
pulmonary valve | 2.95e-13 | 1 |
semi-lunar valve | 2.95e-13 | 1 |
cranial nerve II | 8.64e-13 | 1 |
cranial nerve | 8.64e-13 | 1 |
nerve trunk | 8.64e-13 | 1 |
nerve connecting eye with brain | 8.64e-13 | 1 |
nerve | 8.64e-13 | 1 |
retinal neural layer | 8.64e-13 | 1 |
presumptive neural retina | 8.64e-13 | 1 |
biliary system | 1.63e-12 | 9 |
biliary tree | 1.63e-12 | 9 |
biliary bud | 1.63e-12 | 9 |
chorion | 1.80e-07 | 7 |
neural tissue | 4.98e-07 | 2 |
multi cell component structure | 4.98e-07 | 2 |
neuron projection bundle | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.82e-13 | 1 |
organ system benign neoplasm | 2.32e-13 | 1 |
skin benign neoplasm | 2.32e-13 | 1 |
integumentary system benign neoplasm | 2.32e-13 | 1 |
dermis tumor | 2.32e-13 | 1 |
cutaneous fibrous histiocytoma | 2.32e-13 | 1 |
carcinoma | 7.83e-10 | 106 |
giant cell tumor | 2.58e-07 | 2 |
bone giant cell tumor | 2.58e-07 | 2 |
cell type cancer | 6.05e-07 | 143 |