FFCP PHASE1:Hg19::chr11:67182815..67182840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57571 | |EntrezGene=57571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29268 | |HGNC=29268 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000529925_5end | |association_with_transcript=0bp_to_ENST00000529925_5end | ||
|cluster_id=chr11:67182815..67182840,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_CARNS1_5end | |description=CAGE_peak_3_at_CARNS1_5end | ||
|id=chr11:67182815..67182840,+ | |id=chr11:67182815..67182840,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;5.02e-10;3!CL:0000149;1.24e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.19e-10,3;CL:0000149,1.27e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.91e-20;82!UBERON:0006241;1.52e-11;3!UBERON:0003057;1.52e-11;3!UBERON:0010122;6.43e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-52!57;UBERON:0005068!1.05e-52!57;UBERON:0006241!1.05e-52!57;UBERON:0007135!1.05e-52!57;UBERON:0005743!6.19e-52!86;UBERON:0007023!1.77e-48!115;UBERON:0000073!1.16e-47!94;UBERON:0001016!1.16e-47!94;UBERON:0001017!1.05e-46!82;UBERON:0002616!1.26e-44!59;UBERON:0003075!1.80e-44!86;UBERON:0007284!1.80e-44!86;UBERON:0002346!1.72e-43!90;UBERON:0000955!7.51e-42!69;UBERON:0006238!7.51e-42!69;UBERON:0002780!8.30e-38!41;UBERON:0001890!8.30e-38!41;UBERON:0006240!8.30e-38!41;UBERON:0001893!1.52e-37!34;UBERON:0002020!1.84e-37!34;UBERON:0003528!1.84e-37!34;UBERON:0003080!1.12e-36!42;UBERON:0002791!6.79e-36!33;UBERON:0001869!4.75e-34!32;UBERON:0003056!4.37e-29!61;UBERON:0002619!1.61e-26!22;UBERON:0000153!7.86e-25!129;UBERON:0007811!7.86e-25!129;UBERON:0000033!1.74e-24!123;UBERON:0001950!2.31e-23!20;UBERON:0000956!9.67e-23!25;UBERON:0000203!9.67e-23!25;UBERON:0000924!3.91e-22!173;UBERON:0006601!3.91e-22!173;UBERON:0004121!4.05e-22!169;UBERON:0002308!3.70e-17!9;UBERON:0000125!3.70e-17!9;UBERON:0002420!6.11e-17!9;UBERON:0007245!6.11e-17!9;UBERON:0010009!6.11e-17!9;UBERON:0010011!6.11e-17!9;UBERON:0000454!6.11e-17!9;UBERON:0003076!9.55e-17!15;UBERON:0003057!9.55e-17!15;UBERON:0000025!5.39e-14!194;UBERON:0009663!1.08e-13!7;UBERON:0004732!1.52e-13!13;UBERON:0002298!5.27e-12!8;UBERON:0004733!7.93e-12!12;UBERON:0002028!7.93e-12!12;UBERON:0007277!7.93e-12!12;UBERON:0000200!1.77e-11!6;UBERON:0000349!7.22e-10!5;UBERON:0000483!9.47e-10!309;UBERON:0000119!1.71e-09!312;UBERON:0004111!5.55e-09!241;UBERON:0001871!1.86e-08!7;UBERON:0000064!2.17e-08!219;UBERON:0000369!2.52e-08!4;UBERON:0002435!2.52e-08!4;UBERON:0000204!2.52e-08!4;UBERON:0010082!2.52e-08!4;UBERON:0000477!1.20e-07!286;UBERON:0002680!3.62e-07!9;UBERON:0001895!3.62e-07!9;UBERON:0010092!3.62e-07!9;UBERON:0002240!5.88e-07!3;UBERON:0001896!5.99e-07!3;UBERON:0005290!5.99e-07!3;UBERON:0010096!5.99e-07!3;UBERON:0000988!6.72e-07!3;UBERON:0006331!7.25e-07!3;UBERON:0002021!8.02e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.05e-52!57;UBERON:0005068!1.05e-52!57;UBERON:0006241!1.05e-52!57;UBERON:0007135!1.05e-52!57;UBERON:0005743!6.19e-52!86;UBERON:0007023!1.77e-48!115;UBERON:0000073!1.16e-47!94;UBERON:0001016!1.16e-47!94;UBERON:0001017!1.05e-46!82;UBERON:0002616!1.26e-44!59;UBERON:0003075!1.80e-44!86;UBERON:0007284!1.80e-44!86;UBERON:0002346!1.72e-43!90;UBERON:0000955!7.51e-42!69;UBERON:0006238!7.51e-42!69;UBERON:0002780!8.30e-38!41;UBERON:0001890!8.30e-38!41;UBERON:0006240!8.30e-38!41;UBERON:0001893!1.52e-37!34;UBERON:0002020!1.84e-37!34;UBERON:0003528!1.84e-37!34;UBERON:0003080!1.12e-36!42;UBERON:0002791!6.79e-36!33;UBERON:0001869!4.75e-34!32;UBERON:0003056!4.37e-29!61;UBERON:0002619!1.61e-26!22;UBERON:0000153!7.86e-25!129;UBERON:0007811!7.86e-25!129;UBERON:0000033!1.74e-24!123;UBERON:0001950!2.31e-23!20;UBERON:0000956!9.67e-23!25;UBERON:0000203!9.67e-23!25;UBERON:0000924!3.91e-22!173;UBERON:0006601!3.91e-22!173;UBERON:0004121!4.05e-22!169;UBERON:0002308!3.70e-17!9;UBERON:0000125!3.70e-17!9;UBERON:0002420!6.11e-17!9;UBERON:0007245!6.11e-17!9;UBERON:0010009!6.11e-17!9;UBERON:0010011!6.11e-17!9;UBERON:0000454!6.11e-17!9;UBERON:0003076!9.55e-17!15;UBERON:0003057!9.55e-17!15;UBERON:0000025!5.39e-14!194;UBERON:0009663!1.08e-13!7;UBERON:0004732!1.52e-13!13;UBERON:0002298!5.27e-12!8;UBERON:0004733!7.93e-12!12;UBERON:0002028!7.93e-12!12;UBERON:0007277!7.93e-12!12;UBERON:0000200!1.77e-11!6;UBERON:0000349!7.22e-10!5;UBERON:0000483!9.47e-10!309;UBERON:0000119!1.71e-09!312;UBERON:0004111!5.55e-09!241;UBERON:0001871!1.86e-08!7;UBERON:0000064!2.17e-08!219;UBERON:0000369!2.52e-08!4;UBERON:0002435!2.52e-08!4;UBERON:0000204!2.52e-08!4;UBERON:0010082!2.52e-08!4;UBERON:0000477!1.20e-07!286;UBERON:0002680!3.62e-07!9;UBERON:0001895!3.62e-07!9;UBERON:0010092!3.62e-07!9;UBERON:0002240!5.88e-07!3;UBERON:0001896!5.99e-07!3;UBERON:0005290!5.99e-07!3;UBERON:0010096!5.99e-07!3;UBERON:0000988!6.72e-07!3;UBERON:0006331!7.25e-07!3;UBERON:0002021!8.02e-07!5 | ||
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|short_description=p3@CARNS1 | |short_description=p3@CARNS1 | ||
}} | }} |
Latest revision as of 17:56, 19 September 2015
Short description: | p3@CARNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CARNS1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000529925_5end |
EntrezGene: | CARNS1 |
HGNC: | 29268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.19e-10 | 3 |
visual pigment cell | 1.27e-07 | 4 |