FFCP PHASE1:Hg19::chr1:207119846..207119858,-: Difference between revisions
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|id=chr1:207119846..207119858,-
|short_description=p6@PIGR
|description=CAGE_peak_6_at_PIGR_5end
|association_with_transcript=-35bp_to_ENST00000356495,NM_002644,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5284 | |EntrezGene=5284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8968 | |HGNC=8968 | ||
|TSSclassifier=strong | |||
|UniProt=P01833 | |UniProt=P01833 | ||
|association_with_transcript=-35bp_to_ENST00000356495,NM_002644,uc001hez.2,uc009xbz.2_5end | |||
|cluster_id=chr1:207119846..207119858,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_6_at_PIGR_5end | |||
|id=chr1:207119846..207119858,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;7.88e-13;1!UBERON:0008801;8.84e-13;1!UBERON:0006242;1.86e-12;1!UBERON:0001045;3.26e-12;1!UBERON:0006965;9.81e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.46e-15!115;UBERON:0004921!4.08e-14!129;UBERON:0004185!4.08e-14!129;UBERON:0001007!3.90e-12!155;UBERON:0001555!3.90e-12!155;UBERON:0007026!3.90e-12!155;UBERON:0001829!2.70e-11!2;UBERON:0003127!7.96e-11!2;UBERON:0004119!1.08e-10!169;UBERON:0000925!1.08e-10!169;UBERON:0006595!1.08e-10!169;UBERON:0000341!1.89e-10!2;UBERON:0000078!2.56e-09!18;UBERON:0001155!4.98e-09!9;UBERON:0001044!2.91e-08!6;UBERON:0003293!2.91e-08!6;UBERON:0003294!2.91e-08!6;UBERON:0010047!2.91e-08!6;UBERON:0000167!2.91e-08!6;UBERON:0000166!6.82e-08!21;UBERON:0000077!9.70e-08!130;UBERON:0001041!1.41e-07!98;UBERON:0005409!2.16e-07!35;UBERON:0000059!2.17e-07!11;UBERON:0001723!2.63e-07!3;UBERON:0001033!2.63e-07!3;UBERON:0010056!2.63e-07!3;UBERON:0001004!4.02e-07!72;UBERON:0006562!4.12e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.01e-24;2!UBERON:0004921;1.70e-22;33!UBERON:0001155;6.70e-20;9!UBERON:0001044;8.66e-18;6!UBERON:0003293;8.66e-18;6!UBERON:0003294;8.66e-18;6!UBERON:0010047;8.66e-18;6!UBERON:0003408;8.66e-18;6!UBERON:0000167;8.66e-18;6!UBERON:0000059;2.44e-16;11!UBERON:0000160;2.25e-15;17!UBERON:0001736;7.88e-13;1!UBERON:0001831;8.84e-13;1!UBERON:0001567;8.84e-13;1!UBERON:0001154;3.26e-12;1!UBERON:0001153;3.26e-12;1!UBERON:0009854;3.26e-12;1!UBERON:0005409;5.09e-12;22!UBERON:0001555;2.19e-10;54!UBERON:0001007;3.93e-08;81!UBERON:0001041;6.21e-08;14!UBERON:0004089;5.11e-07;2!UBERON:0003127;6.80e-07;2!UBERON:0000341;9.81e-07;2!UBERON:0006562;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.02e-24,2;UBERON:0001155,6.08e-20,9;UBERON:0001044,8.67e-18,6;UBERON:0003293,8.67e-18,6;UBERON:0003294,8.67e-18,6;UBERON:0010047,8.67e-18,6;UBERON:0000167,8.67e-18,6;UBERON:0000059,2.25e-16,11;UBERON:0000160,2.12e-15,17;UBERON:0007023,1.10e-14,114;UBERON:0001736,7.89e-13,1;UBERON:0006298,7.89e-13,1;UBERON:0001831,8.85e-13,1;UBERON:0001567,8.85e-13,1;UBERON:0008801,8.85e-13,1;UBERON:0001154,2.20e-12,1;UBERON:0001153,2.20e-12,1;UBERON:0001045,2.20e-12,1;UBERON:0003408,6.62e-11,10;UBERON:0005409,1.22e-10,25;UBERON:0004921,7.93e-10,118;UBERON:0001007,2.65e-09,145;UBERON:0001555,2.65e-09,145;UBERON:0007026,2.65e-09,145;UBERON:0000166,1.77e-08,22;UBERON:0004119,2.85e-08,160;UBERON:0000925,2.85e-08,160;UBERON:0006595,2.85e-08,160;UBERON:0004089,5.11e-07,2;UBERON:0003127,6.80e-07,2;UBERON:0000341,9.02e-07,2 | |||
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|short_description=p6@PIGR | |||
}} | }} |
Latest revision as of 06:53, 20 September 2015
Short description: | p6@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PIGR_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -35bp_to_ENST00000356495, NM_002644, uc001hez.2, uc009xbz.2_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | P01833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.02e-24 | 2 |
colon | 6.08e-20 | 9 |
saliva-secreting gland | 8.67e-18 | 6 |
gland of oral region | 8.67e-18 | 6 |
gland of foregut | 8.67e-18 | 6 |
oral gland | 8.67e-18 | 6 |
oral cavity | 8.67e-18 | 6 |
large intestine | 2.25e-16 | 11 |
intestine | 2.12e-15 | 17 |
adult organism | 1.10e-14 | 114 |
submandibular gland | 7.89e-13 | 1 |
submandibular gland primordium | 7.89e-13 | 1 |
parotid gland | 8.85e-13 | 1 |
cheek | 8.85e-13 | 1 |
parotid gland primordium | 8.85e-13 | 1 |
vermiform appendix | 2.20e-12 | 1 |
caecum | 2.20e-12 | 1 |
midgut | 2.20e-12 | 1 |
gland of gut | 6.62e-11 | 10 |
gastrointestinal system | 1.22e-10 | 25 |
subdivision of digestive tract | 7.93e-10 | 118 |
digestive system | 2.65e-09 | 145 |
digestive tract | 2.65e-09 | 145 |
primitive gut | 2.65e-09 | 145 |
oral opening | 1.77e-08 | 22 |
endoderm-derived structure | 2.85e-08 | 160 |
endoderm | 2.85e-08 | 160 |
presumptive endoderm | 2.85e-08 | 160 |
midface | 5.11e-07 | 2 |
open tracheal system trachea | 6.80e-07 | 2 |
throat | 9.02e-07 | 2 |