FFCP PHASE1:Hg19::chr9:97683495..97683542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84909 | |EntrezGene=84909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1361 | |HGNC=1361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000479161_5end | |association_with_transcript=0bp_to_ENST00000479161_5end | ||
|cluster_id=chr9:97683495..97683542,+ | |||
|description=CAGE_peak_6_at_C9orf3_5end | |description=CAGE_peak_6_at_C9orf3_5end | ||
|id=chr9:97683495..97683542,+ | |id=chr9:97683495..97683542,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.97e-28!180;CL:0000057!3.05e-15!75;CL:0000359!3.18e-12!32;CL:0000680!5.28e-12!57;CL:0000056!5.28e-12!57;CL:0000355!5.28e-12!57;CL:0000183!5.63e-11!59;CL:0000192!9.55e-11!42;CL:0000514!9.55e-11!42;CL:0000187!1.67e-10!54;CL:0000393!3.56e-08!60;CL:0000211!3.56e-08!60;CL:0002620!6.85e-08!23;CL:0000222!1.25e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.97e-28!180;CL:0000057!3.05e-15!75;CL:0000359!3.18e-12!32;CL:0000680!5.28e-12!57;CL:0000056!5.28e-12!57;CL:0000355!5.28e-12!57;CL:0000183!5.63e-11!59;CL:0000192!9.55e-11!42;CL:0000514!9.55e-11!42;CL:0000187!1.67e-10!54;CL:0000393!3.56e-08!60;CL:0000211!3.56e-08!60;CL:0002620!6.85e-08!23;CL:0000222!1.25e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.19e-13;32!CL:0000349;1.13e-07;19!CL:0002620;1.38e-07;23!CL:0002539;5.62e-07;10!CL:0000192;9.50e-07;43 | |ontology_enrichment_celltype_v019=CL:0000359;3.19e-13;32!CL:0000349;1.13e-07;19!CL:0002620;1.38e-07;23!CL:0002539;5.62e-07;10!CL:0000192;9.50e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.15e-13,32;CL:0000057,2.27e-12,76;CL:0000192,3.49e-08,43;CL:0000514,3.49e-08,43;CL:0002620,1.11e-07,23;CL:0000680,1.37e-07,58;CL:0000056,1.37e-07,58;CL:0000355,1.37e-07,58;CL:0000349,2.07e-07,19;CL:0002539,4.11e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;9.50e-07;43 | |ontology_enrichment_development_v019=CL:0000514;9.50e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.92e-13!83;UBERON:0002329!2.92e-13!83;UBERON:0003077!2.92e-13!83;UBERON:0003059!2.92e-13!83;UBERON:0007282!2.92e-13!83;UBERON:0009618!2.92e-13!83;UBERON:0007285!2.92e-13!83;UBERON:0000486!4.68e-13!82;UBERON:0004290!9.04e-12!70;UBERON:0000475!1.06e-11!365;UBERON:0005256!4.57e-11!143;UBERON:0001134!5.63e-11!61;UBERON:0002036!5.63e-11!61;UBERON:0003082!5.63e-11!61;UBERON:0002385!2.23e-10!63;UBERON:0001015!2.23e-10!63;UBERON:0000383!2.23e-10!63;UBERON:0002100!1.15e-09!216;UBERON:0000481!4.73e-09!347;UBERON:0001637!1.53e-08!42;UBERON:0003509!1.53e-08!42;UBERON:0004572!1.53e-08!42;UBERON:0004573!3.80e-08!33;UBERON:0004571!3.80e-08!33;UBERON:0004923!8.41e-08!57;UBERON:0004872!4.11e-07!84;UBERON:0000468!4.66e-07!659;UBERON:0003104!5.97e-07!238;UBERON:0009142!5.97e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!2.92e-13!83;UBERON:0002329!2.92e-13!83;UBERON:0003077!2.92e-13!83;UBERON:0003059!2.92e-13!83;UBERON:0007282!2.92e-13!83;UBERON:0009618!2.92e-13!83;UBERON:0007285!2.92e-13!83;UBERON:0000486!4.68e-13!82;UBERON:0004290!9.04e-12!70;UBERON:0000475!1.06e-11!365;UBERON:0005256!4.57e-11!143;UBERON:0001134!5.63e-11!61;UBERON:0002036!5.63e-11!61;UBERON:0003082!5.63e-11!61;UBERON:0002385!2.23e-10!63;UBERON:0001015!2.23e-10!63;UBERON:0000383!2.23e-10!63;UBERON:0002100!1.15e-09!216;UBERON:0000481!4.73e-09!347;UBERON:0001637!1.53e-08!42;UBERON:0003509!1.53e-08!42;UBERON:0004572!1.53e-08!42;UBERON:0004573!3.80e-08!33;UBERON:0004571!3.80e-08!33;UBERON:0004923!8.41e-08!57;UBERON:0004872!4.11e-07!84;UBERON:0000468!4.66e-07!659;UBERON:0003104!5.97e-07!238;UBERON:0009142!5.97e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.23e-11;33!UBERON:0004571;5.23e-11;33!UBERON:0001637;9.75e-09;42!UBERON:0003509;9.75e-09;42!UBERON:0004572;9.75e-09;42!UBERON:0004457;4.80e-07;9!UBERON:0000042;4.80e-07;9!UBERON:0004237;5.62e-07;10!UBERON:0004695;5.62e-07;10!UBERON:0002111;5.62e-07;10!UBERON:0004178;5.62e-07;10!UBERON:0003688;9.50e-07;6!UBERON:0002358;9.50e-07;6!UBERON:0003684;9.50e-07;6!UBERON:0001178;9.50e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004573;5.23e-11;33!UBERON:0004571;5.23e-11;33!UBERON:0001637;9.75e-09;42!UBERON:0003509;9.75e-09;42!UBERON:0004572;9.75e-09;42!UBERON:0004457;4.80e-07;9!UBERON:0000042;4.80e-07;9!UBERON:0004237;5.62e-07;10!UBERON:0004695;5.62e-07;10!UBERON:0002111;5.62e-07;10!UBERON:0004178;5.62e-07;10!UBERON:0003688;9.50e-07;6!UBERON:0002358;9.50e-07;6!UBERON:0003684;9.50e-07;6!UBERON:0001178;9.50e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,9.84e-13,33;UBERON:0004571,9.84e-13,33;UBERON:0001637,1.39e-12,42;UBERON:0003509,1.39e-12,42;UBERON:0004572,1.39e-12,42;UBERON:0005631,7.07e-08,14;UBERON:0000158,7.07e-08,14;UBERON:0007503,3.31e-07,78;UBERON:0004237,4.11e-07,10;UBERON:0004695,4.11e-07,10;UBERON:0002111,4.11e-07,10;UBERON:0004178,4.11e-07,10;UBERON:0007500,4.23e-07,59;UBERON:0001981,4.23e-07,59;UBERON:0004537,4.23e-07,59;UBERON:0006965,4.23e-07,59;UBERON:0003688,7.43e-07,6;UBERON:0002358,7.43e-07,6;UBERON:0003684,7.43e-07,6;UBERON:0001178,7.43e-07,6;UBERON:0000486,7.81e-07,83 | |||
|phase1_expression=3.27021082687002,3.42560838225573,3.38290569830331,5.00366491765652,1.78784437770915,3.48935409640147,2.53299878168311,0,0,1.47440361900905,1.39560233594486,4.58726881473362,5.53910654279752,0,0,3.36162573225888,3.61616716814386,2.92124036154949,3.41552959153355,1.23121058076788,1.42800483870977,2.82109249330279,0.85870796139317,1.23186982565596,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,9.75885711438329,10.0267582127178,7.82171202388448,8.74814541756209,3.89307896242109,1.22895262313288,1.10864698731282,0.702678285545008,0.196468613246569,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,9.93943903390637,4.68532893158945,3.83986624358335,1.72101972449288,1.41867352879343,1.68203280042692,3.20246987189115,7.15335890409764,0.311211035399766,0.67355336034844,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,1.71141546463335,0.149448680551801,0.939475989150119,0.161872944368132,0.421352420106746,0.61246251376468,0.491337269247072,0.206651562351531,3.56400857184616,3.4617370098998,0,0,0.505008341862199,1.00094815897571,1.10825646193673,6.14568669233173,7.66219489497549,4.35690370829131,0.567160915800105,3.7671823494661,6.62027905337559,1.48352330811693,2.70081986475962,2.37020817248409,3.60696756063881,4.65292140828975,3.03797398034279,3.02054715999716,5.80597680761463,3.31379635112278,1.13152239773168,3.90510551768276,3.42557133973977,1.69560592310488,0.386521706326594,0.545492241181669,0,0,0,0,0.10366105501537,0,0,4.69348596989448,1.92972281457866,0,0.928735856063958,0,2.36613600079688,2.02301628093722,2.16909926895134,1.54411561825352,1.52515610864684,1.66089433377768,1.34831308160164,1.56977172100277,3.07797725557112,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.857839051492628,0.219500570817251,0,0,0.277765335475589,0.325808305310325,0,0,1.27523445472584,2.11335649624479,0,0,0,0,0.858486162094873,0,0,0,0,3.52762469217605,0.708875486211932,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.336393253036082,0.43596006883328,0.5867062865676,3.49033632546,0,0,1.32969058292435,1.04007436911366,0.771622122786426,0,0.799266537048298,0.428933980974443,0,0.823240336780769,0.325736184293735,0.355391948742546,0,2.1100756394171,3.48613383440118,1.49959486773086,0,0,0,5.03212196532324,0,1.42636905040718,7.6734092533817,2.26023954805422,7.87868238255541,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,4.57535895367776,6.95873056308931,7.56971592162886,4.80279801470124,1.80567659836631,2.27407504055985,2.0694614258501,3.32112799267718,2.94990669666725,0.0868836144680828,0.783204629850962,0.343143423810856,0,0,0,4.24378600024763,9.98612637062982,3.0239029332968,6.94701861892575,5.21770709179412,2.80660094433074,6.15067916427365,4.09365799253363,5.95159508231348,5.93672265779964,0,0.887808626565635,0.246381468041427,0.519254429183621,0.464841513839837,0.241718899183244,1.80455823272956,0,0.114814448164607,0.364182336013434,0.655622074797121,0.451199612907412,1.69433741629712,0,1.46139224653261,1.26661954671451,0,0,0.647747748306418,1.54227252690289,2.98041081298238,2.50844886927427,1.01950509218015,0,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0,0,1.19040304263846,1.15513299888823,1.14853107599234,0,6.42735719376638,0.48335359146061,0.308097234229289,0.15350367472613,0.413509717453592,0.322260734604821,0.290033387828457,0.767039646744908,1.78064071293475,0.495854746082934,1.72971060628596,1.78657797492418,0,5.57814659156743,2.51849877464512,0,1.23213432070436,4.7907542728532,1.73986598415015,4.07713282028624,6.5837447901316,0,1.2655176988749,0.571890581771475,0.255897791311334,0,0.95460974377781,2.35484592059769,0.899362287916574,0.54907405947211,0.117812402345686,4.04364963146632,1.58510321173008,1.26377536871694,0.48763373908959,3.1682753652067,3.16950440270266,0.545999645631943,0.141405431953713,1.13008116620243,2.75682671773062,3.3171948762061,9.64591947558278,0.578775534266688,0,5.88440093191842,3.40805847909725,0.845086807596724,0.430234056612155,0.785992328104969,7.49009208110625,0,3.37772216476263,2.30506425071931,0,0,0,1.34060455107157,0,0.188287601553558,1.72202149068492,3.36942951335251,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.852408440419239,1.19372242368845,3.26661148915902,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0.422250816255987,1.19548792950642,0,0,11.249555075237,0,19.2844544350321,0.898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,0.463840490809256,0,0.260427761085233,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0.24119287725081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| ||
|short_description=p6@C9orf3 | |short_description=p6@C9orf3 | ||
}} | }} |
Latest revision as of 10:12, 18 September 2015
Short description: | p6@C9orf3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C9orf3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479161_5end |
EntrezGene: | C9orf3 |
HGNC: | 1361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.15e-13 | 32 |
fibroblast | 2.27e-12 | 76 |
smooth muscle cell | 3.49e-08 | 43 |
smooth muscle myoblast | 3.49e-08 | 43 |
skin fibroblast | 1.11e-07 | 23 |
muscle precursor cell | 1.37e-07 | 58 |
myoblast | 1.37e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.37e-07 | 58 |
extraembryonic cell | 2.07e-07 | 19 |
aortic smooth muscle cell | 4.11e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 9.84e-13 | 33 |
systemic arterial system | 9.84e-13 | 33 |
artery | 1.39e-12 | 42 |
arterial blood vessel | 1.39e-12 | 42 |
arterial system | 1.39e-12 | 42 |
extraembryonic membrane | 7.07e-08 | 14 |
membranous layer | 7.07e-08 | 14 |
epithelial vesicle | 3.31e-07 | 78 |
blood vessel smooth muscle | 4.11e-07 | 10 |
arterial system smooth muscle | 4.11e-07 | 10 |
artery smooth muscle tissue | 4.11e-07 | 10 |
aorta smooth muscle tissue | 4.11e-07 | 10 |
epithelial tube open at both ends | 4.23e-07 | 59 |
blood vessel | 4.23e-07 | 59 |
blood vasculature | 4.23e-07 | 59 |
vascular cord | 4.23e-07 | 59 |
omentum | 7.43e-07 | 6 |
peritoneum | 7.43e-07 | 6 |
abdominal cavity | 7.43e-07 | 6 |
visceral peritoneum | 7.43e-07 | 6 |
multilaminar epithelium | 7.81e-07 | 83 |