FFCP PHASE1:Hg19::chr1:211500129..211500189,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:211500129..211500189,+
|short_description=p1@TRAF5
|description=CAGE_peak_1_at_TRAF5_5end
|association_with_transcript=0bp_to_ENST00000261464,ENST000004279...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7188 | |EntrezGene=7188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12035 | |HGNC=12035 | ||
|TSSclassifier=strong | |||
|UniProt=O00463,F5H1P7,Q6FHY1 | |UniProt=O00463,F5H1P7,Q6FHY1 | ||
|association_with_transcript=0bp_to_ENST00000261464,ENST00000427925,ENST00000494355,NM_001033910,uc001hii.2,uc010psx.1,uc010psy.1_5end | |||
|cluster_id=chr1:211500129..211500189,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_1_at_TRAF5_5end | |||
|id=chr1:211500129..211500189,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.32e-17!53;CL:0000051!1.32e-17!53;CL:0000838!2.38e-17!52;CL:0000791!6.73e-10!18;CL:0000789!6.73e-10!18;CL:0002420!6.73e-10!18;CL:0002419!6.73e-10!18;CL:0000790!6.73e-10!18;CL:0000945!9.14e-10!24;CL:0000826!9.14e-10!24;CL:0000236!1.58e-08!14;CL:0000084!6.44e-08!25;CL:0000827!6.44e-08!25;CL:0000625!5.26e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.11e-10;53!CL:0000791;6.45e-10;18!CL:0000789;6.45e-10;18!CL:0002419;6.45e-10;18!CL:0000945;8.73e-10;24!CL:0000236;2.10e-08;13!CL:0000084;5.08e-08;25!CL:0000625;5.22e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.27e-17,53;CL:0000051,1.27e-17,53;CL:0000838,2.30e-17,52;CL:0000791,6.69e-10,18;CL:0000789,6.69e-10,18;CL:0002420,6.69e-10,18;CL:0002419,6.69e-10,18;CL:0000790,6.69e-10,18;CL:0000945,9.08e-10,24;CL:0000826,9.08e-10,24;CL:0000236,1.57e-08,14;CL:0000084,6.27e-08,25;CL:0000827,6.27e-08,25;CL:0000625,5.24e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.11e-10;53!CL:0000790;6.45e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TRAF5 | |||
}} | }} |
Latest revision as of 22:48, 24 September 2015
Short description: | p1@TRAF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAF5_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000261464, ENST00000427925, ENST00000494355, NM_001033910, uc001hii.2, uc010psx.1, uc010psy.1_5end |
EntrezGene: | TRAF5 |
HGNC: | 12035 |
UniProt: | O00463F5H1P7Q6FHY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.27e-17 | 53 |
common lymphoid progenitor | 1.27e-17 | 53 |
lymphoid lineage restricted progenitor cell | 2.30e-17 | 52 |
mature alpha-beta T cell | 6.69e-10 | 18 |
alpha-beta T cell | 6.69e-10 | 18 |
immature T cell | 6.69e-10 | 18 |
mature T cell | 6.69e-10 | 18 |
immature alpha-beta T cell | 6.69e-10 | 18 |
lymphocyte of B lineage | 9.08e-10 | 24 |
pro-B cell | 9.08e-10 | 24 |
B cell | 1.57e-08 | 14 |
T cell | 6.27e-08 | 25 |
pro-T cell | 6.27e-08 | 25 |
CD8-positive, alpha-beta T cell | 5.24e-07 | 11 |