FFCP PHASE1:Hg19::chr19:50270168..50270179,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=160 | |EntrezGene=160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=561 | |HGNC=561 | ||
|TSSclassifier=strong | |||
|UniProt=O95782 | |UniProt=O95782 | ||
|association_with_transcript=0bp_to_ENST00000354293,ENST00000359032,NM_014203,NM_130787,uc002ppn.2,uc002ppo.2,uc010enj.1_5end | |association_with_transcript=0bp_to_ENST00000354293,ENST00000359032,NM_014203,NM_130787,uc002ppn.2,uc002ppo.2,uc010enj.1_5end | ||
|cluster_id=chr19:50270168..50270179,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_AP2A1_5end | |description=CAGE_peak_5_at_AP2A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;7.62e-26;1!CL:0000557;7.62e-26;1!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | |ontology_enrichment_celltype_v019=CL:0002032;7.62e-26;1!CL:0000557;7.62e-26;1!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.59e-07,4;CL:0002222,1.59e-07,4;CL:0002224,1.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10 | |ontology_enrichment_development_v019=UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!9.29e-08!20;UBERON:0007023!3.81e-07!115;UBERON:0001049!7.41e-07!57;UBERON:0005068!7.41e-07!57;UBERON:0006241!7.41e-07!57;UBERON:0007135!7.41e-07!57 | |ontology_enrichment_uberon=UBERON:0001950!9.29e-08!20;UBERON:0007023!3.81e-07!115;UBERON:0001049!7.41e-07!57;UBERON:0005068!7.41e-07!57;UBERON:0006241!7.41e-07!57;UBERON:0007135!7.41e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.51e-13;8!UBERON:0003135;4.03e-10;11!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.51e-13;8!UBERON:0003135;4.03e-10;11!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-13,8;UBERON:0003135,4.03e-10,11;UBERON:0010077,1.59e-07,4;UBERON:0005389,1.59e-07,4;UBERON:0000484,1.59e-07,4;UBERON:0002546,1.59e-07,4;UBERON:0000965,1.59e-07,4;UBERON:0001803,1.59e-07,4;UBERON:0003073,1.59e-07,4;UBERON:0005426,1.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,0.472674085820339,0,0,5.30465255765736,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0.37223371266318,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.348631135379878,0.241718899183244,0,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.290033387828457,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.30347334256665,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.608731130888112,0,0.563391205064483,0,0,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,1.01489521846434,0.764637207142375,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0.241192877250816,0,0.442317039724898,0.295547618953547,0.219385397153973,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0.179515288819544,0.108647371922008,0.638002319463839,0.183195186803725,0,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0.627865836814451,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0.316553979779393,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0.1251909307065,0,0,0.310482014706917,0.138348634936231,0,0.151649117541648,0.285465333544967,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0.211312123358627,0,0.213383459388282,0,0,0.184105950251841,0.279759015438889,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.691572524642179,0.484426936895553,0,0.0981477185010256,0,0,0,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0.679697329768317,0.328863867814245,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0.187967835959707,0.128915775947154,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0.543931921527318,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0.250707539292375,10.0785668630258,14.7380271585898,0,0.310298987585686,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,0,0,0.472674085820339,0,0,5.30465255765736,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0.37223371266318,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.348631135379878,0.241718899183244,0,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.290033387828457,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.30347334256665,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.608731130888112,0,0.563391205064483,0,0,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,1.01489521846434,0.764637207142375,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0.20453736500431,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0.241192877250816,0,0.442317039724898,0.295547618953547,0.219385397153973,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0.179515288819544,0.108647371922008,0.638002319463839,0.183195186803725,0,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0.627865836814451,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0.316553979779393,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0.1251909307065,0,0,0.310482014706917,0.138348634936231,0,0.151649117541648,0.285465333544967,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0.211312123358627,0,0.213383459388282,0,0,0.184105950251841,0.279759015438889,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.691572524642179,0.484426936895553,0,0.0981477185010256,0,0,0,0.381382095467167,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0.679697329768317,0.328863867814245,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0.187967835959707,0.128915775947154,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0.543931921527318,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0.250707539292375,10.0785668630258,14.7380271585898,0,0.310298987585686,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p5@AP2A1 | |short_description=p5@AP2A1 | ||
}} | }} |
Latest revision as of 08:53, 19 September 2015
Short description: | p5@AP2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AP2A1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000354293, ENST00000359032, NM_014203, NM_130787, uc002ppn.2, uc002ppo.2, uc010enj.1_5end |
EntrezGene: | AP2A1 |
HGNC: | 561 |
UniProt: | O95782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.59e-07 | 4 |
vertebrate lens cell | 1.59e-07 | 4 |
lens epithelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.51e-13 | 8 |
male reproductive organ | 4.03e-10 | 11 |
cuboidal epithelium | 1.59e-07 | 4 |
transparent eye structure | 1.59e-07 | 4 |
simple cuboidal epithelium | 1.59e-07 | 4 |
cranial placode | 1.59e-07 | 4 |
lens of camera-type eye | 1.59e-07 | 4 |
epithelium of lens | 1.59e-07 | 4 |
lens placode | 1.59e-07 | 4 |
lens vesicle | 1.59e-07 | 4 |