FFCP PHASE1:Hg19::chr8:107630313..107630329,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55074 | |EntrezGene=55074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15822 | |HGNC=15822 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N573 | |UniProt=Q8N573 | ||
|association_with_transcript=-24bp_to_ENST00000497705,uc003ymg.1_5end | |association_with_transcript=-24bp_to_ENST00000497705,uc003ymg.1_5end | ||
|cluster_id=chr8:107630313..107630329,+ | |||
|coexpression_cluster_id=C791 | |coexpression_cluster_id=C791 | ||
|description=CAGE_peak_10_at_OXR1_5end | |description=CAGE_peak_10_at_OXR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000159!9.75e-08!2;CL:0000181!1.28e-07!12;CL:0000417!1.28e-07!12;CL:0000668!1.28e-07!12;CL:0000414!1.28e-07!12;CL:0000412!1.28e-07!12;CL:0000182!1.28e-07!12 | |ontology_enrichment_celltype=CL:0000159!9.75e-08!2;CL:0000181!1.28e-07!12;CL:0000417!1.28e-07!12;CL:0000668!1.28e-07!12;CL:0000414!1.28e-07!12;CL:0000412!1.28e-07!12;CL:0000182!1.28e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002253;4.56e-07;2 | |ontology_enrichment_celltype_v019=CL:0002253;4.56e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.56e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.13e-23;2!UBERON:0008801;8.84e-13;1!UBERON:0006298;1.05e-12;1!UBERON:0005754;1.25e-12;1!UBERON:0003104;4.12e-12;31!UBERON:0006595;5.63e-07;86 | |ontology_enrichment_development_v019=UBERON:0007297;1.13e-23;2!UBERON:0008801;8.84e-13;1!UBERON:0006298;1.05e-12;1!UBERON:0005754;1.25e-12;1!UBERON:0003104;4.12e-12;31!UBERON:0006595;5.63e-07;86 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;9.45e-08;14 | |ontology_enrichment_disease_v019=DOID:3119;9.45e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,9.46e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.76e-24!115;UBERON:0006947!1.19e-12!3;UBERON:0004054!1.19e-12!3;UBERON:0004921!2.63e-10!129;UBERON:0004185!2.63e-10!129;UBERON:0005904!1.40e-09!4;UBERON:0003408!2.44e-09!10;UBERON:0000077!2.65e-09!130;UBERON:0002530!3.47e-09!59;UBERON:0001829!5.02e-09!2;UBERON:0002365!2.33e-08!31;UBERON:0002330!2.33e-08!31;UBERON:0002148!3.74e-08!2;UBERON:0009662!3.74e-08!2;UBERON:0001041!6.85e-08!98;UBERON:0005057!7.32e-08!26;UBERON:0001007!1.17e-07!155;UBERON:0001555!1.17e-07!155;UBERON:0007026!1.17e-07!155;UBERON:0000466!7.00e-07!126 | |ontology_enrichment_uberon=UBERON:0007023!4.76e-24!115;UBERON:0006947!1.19e-12!3;UBERON:0004054!1.19e-12!3;UBERON:0004921!2.63e-10!129;UBERON:0004185!2.63e-10!129;UBERON:0005904!1.40e-09!4;UBERON:0003408!2.44e-09!10;UBERON:0000077!2.65e-09!130;UBERON:0002530!3.47e-09!59;UBERON:0001829!5.02e-09!2;UBERON:0002365!2.33e-08!31;UBERON:0002330!2.33e-08!31;UBERON:0002148!3.74e-08!2;UBERON:0009662!3.74e-08!2;UBERON:0001041!6.85e-08!98;UBERON:0005057!7.32e-08!26;UBERON:0001007!1.17e-07!155;UBERON:0001555!1.17e-07!155;UBERON:0007026!1.17e-07!155;UBERON:0000466!7.00e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.47e-34;3!UBERON:0004054;1.47e-34;3!UBERON:0005904;4.17e-26;4!UBERON:0001829;1.07e-23;2!UBERON:0001044;1.40e-17;6!UBERON:0003293;1.40e-17;6!UBERON:0003294;1.40e-17;6!UBERON:0010047;1.40e-17;6!UBERON:0003408;1.40e-17;6!UBERON:0000167;1.40e-17;6!UBERON:0001041;3.79e-13;14!UBERON:0001301;7.88e-13;1!UBERON:0001831;8.84e-13;1!UBERON:0001567;8.84e-13;1!UBERON:0001000;1.05e-12;1!UBERON:0001736;1.05e-12;1!UBERON:0005352;1.05e-12;1!UBERON:0000998;1.25e-12;1!UBERON:0006868;1.25e-12;1!UBERON:0002365;1.36e-12;31!UBERON:0002330;1.36e-12;31!UBERON:0002171;3.44e-12;1!UBERON:0006518;3.44e-12;1!UBERON:0008949;3.44e-12;1!UBERON:0000101;3.44e-12;1!UBERON:0002167;3.44e-12;1!UBERON:0001052;3.86e-12;4!UBERON:0000058;8.22e-11;10!UBERON:0004907;6.80e-10;5!UBERON:0003135;7.07e-10;11!UBERON:0004921;9.21e-10;33!UBERON:0004089;5.11e-07;2!UBERON:0003127;7.61e-07;2!UBERON:0002148;7.61e-07;2!UBERON:0006331;7.61e-07;2!UBERON:0009662;7.61e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.47e-34;3!UBERON:0004054;1.47e-34;3!UBERON:0005904;4.17e-26;4!UBERON:0001829;1.07e-23;2!UBERON:0001044;1.40e-17;6!UBERON:0003293;1.40e-17;6!UBERON:0003294;1.40e-17;6!UBERON:0010047;1.40e-17;6!UBERON:0003408;1.40e-17;6!UBERON:0000167;1.40e-17;6!UBERON:0001041;3.79e-13;14!UBERON:0001301;7.88e-13;1!UBERON:0001831;8.84e-13;1!UBERON:0001567;8.84e-13;1!UBERON:0001000;1.05e-12;1!UBERON:0001736;1.05e-12;1!UBERON:0005352;1.05e-12;1!UBERON:0000998;1.25e-12;1!UBERON:0006868;1.25e-12;1!UBERON:0002365;1.36e-12;31!UBERON:0002330;1.36e-12;31!UBERON:0002171;3.44e-12;1!UBERON:0006518;3.44e-12;1!UBERON:0008949;3.44e-12;1!UBERON:0000101;3.44e-12;1!UBERON:0002167;3.44e-12;1!UBERON:0001052;3.86e-12;4!UBERON:0000058;8.22e-11;10!UBERON:0004907;6.80e-10;5!UBERON:0003135;7.07e-10;11!UBERON:0004921;9.21e-10;33!UBERON:0004089;5.11e-07;2!UBERON:0003127;7.61e-07;2!UBERON:0002148;7.61e-07;2!UBERON:0006331;7.61e-07;2!UBERON:0009662;7.61e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.56e-34,3;UBERON:0004054,1.56e-34,3;UBERON:0005904,4.35e-26,4;UBERON:0001829,1.01e-23,2;UBERON:0001044,1.36e-17,6;UBERON:0003293,1.36e-17,6;UBERON:0003294,1.36e-17,6;UBERON:0010047,1.36e-17,6;UBERON:0000167,1.36e-17,6;UBERON:0001301,7.89e-13,1;UBERON:0001831,8.85e-13,1;UBERON:0001567,8.85e-13,1;UBERON:0008801,8.85e-13,1;UBERON:0001736,9.92e-13,1;UBERON:0006298,9.92e-13,1;UBERON:0001000,1.11e-12,1;UBERON:0005352,1.11e-12,1;UBERON:0000998,1.25e-12,1;UBERON:0006868,1.25e-12,1;UBERON:0002365,1.42e-12,31;UBERON:0002330,1.42e-12,31;UBERON:0002171,3.85e-12,1;UBERON:0006518,3.85e-12,1;UBERON:0008949,3.85e-12,1;UBERON:0000101,3.85e-12,1;UBERON:0002167,3.85e-12,1;UBERON:0001052,3.86e-12,4;UBERON:0003408,8.64e-11,10;UBERON:0007023,2.62e-10,114;UBERON:0004907,6.80e-10,5;UBERON:0003135,7.18e-10,11;UBERON:0004921,9.26e-10,118;UBERON:0001041,3.33e-09,87;UBERON:0002530,1.28e-08,59;UBERON:0001007,1.15e-07,145;UBERON:0001555,1.15e-07,145;UBERON:0007026,1.15e-07,145;UBERON:0004089,5.11e-07,2;UBERON:0005172,5.47e-07,54;UBERON:0005173,5.47e-07,54;UBERON:0003127,7.20e-07,2;UBERON:0002148,8.06e-07,2;UBERON:0006331,8.06e-07,2;UBERON:0009662,8.06e-07,2;UBERON:0004119,8.40e-07,160;UBERON:0000925,8.40e-07,160;UBERON:0006595,8.40e-07,160;UBERON:0000341,8.52e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8616322844086,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,11.4429476826323,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,16.7737601512349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,4.92507363513437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,0.824158583811665,0.876246070104404,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,1.75862680413699,0,2.19781025814636,0.13223260174269,0,0,0.961086713109252,0,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,12.6099286377152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941917114206168,0,1.40136081656895,0,0,0,0.142953088353313,0,0,0,0,0,0,0,6.02318302348389,0,0,9.31451510420044,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9269613685181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0,0,0.103432995861895,1.91910583710883,0,0.258355639344024,0.434523000071005,0,0,0,0,0,0.202056159043763,2.36683277795832,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8616322844086,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,11.4429476826323,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,16.7737601512349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,4.92507363513437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,0.824158583811665,0.876246070104404,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,1.75862680413699,0,2.19781025814636,0.13223260174269,0,0,0.961086713109252,0,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,12.6099286377152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941917114206168,0,1.40136081656895,0,0,0,0.142953088353313,0,0,0,0,0,0,0,6.02318302348389,0,0,9.31451510420044,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9269613685181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0,0,0.103432995861895,1.91910583710883,0,0.258355639344024,0.434523000071005,0,0,0,0,0,0.202056159043763,2.36683277795832,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p10@OXR1 | |short_description=p10@OXR1 | ||
}} | }} |
Latest revision as of 02:27, 25 September 2015
Short description: | p10@OXR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_OXR1_5end |
Coexpression cluster: | C791_salivary_epididymis_submaxillary_ductus_seminal_parotid_colon |
Association with transcript: | -24bp_to_ENST00000497705, uc003ymg.1_5end |
EntrezGene: | OXR1 |
HGNC: | 15822 |
UniProt: | Q8N573 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 9.46e-08 | 14 |