FFCP PHASE1:Hg19::chr1:19970778..19970796,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4681 | |EntrezGene=4681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7650 | |HGNC=7650 | ||
|TSSclassifier=strong | |||
|UniProt=P41271 | |UniProt=P41271 | ||
|association_with_transcript=-10bp_to_NM_005380_5end | |association_with_transcript=-10bp_to_NM_005380_5end | ||
|cluster_id=chr1:19970778..19970796,+ | |||
|description=CAGE_peak_3_at_NBL1_5end | |description=CAGE_peak_3_at_NBL1_5end | ||
|id=chr1:19970778..19970796,+ | |id=chr1:19970778..19970796,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.97e-12!180;CL:0000183!1.18e-09!59;CL:0000192!2.54e-08!42;CL:0000514!2.54e-08!42;CL:0000187!3.40e-08!54;CL:0000680!1.63e-07!57;CL:0000056!1.63e-07!57;CL:0000355!1.63e-07!57;CL:0000359!2.57e-07!32 | |ontology_enrichment_celltype=CL:0000055!8.97e-12!180;CL:0000183!1.18e-09!59;CL:0000192!2.54e-08!42;CL:0000514!2.54e-08!42;CL:0000187!3.40e-08!54;CL:0000680!1.63e-07!57;CL:0000056!1.63e-07!57;CL:0000355!1.63e-07!57;CL:0000359!2.57e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.07e-07;32!CL:0000192;6.85e-07;43 | |ontology_enrichment_celltype_v019=CL:0000359;4.07e-07;32!CL:0000192;6.85e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.77e-09,43;CL:0000514,9.77e-09,43;CL:0000187,1.37e-08,55;CL:0000680,6.91e-08,58;CL:0000056,6.91e-08,58;CL:0000355,6.91e-08,58;CL:0000359,2.17e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.85e-07;43 | |ontology_enrichment_development_v019=CL:0000514;6.85e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@NBL1 | |short_description=p3@NBL1 | ||
}} | }} |
Latest revision as of 15:33, 19 September 2015
Short description: | p3@NBL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NBL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_NM_005380_5end |
EntrezGene: | NBL1 |
HGNC: | 7650 |
UniProt: | P41271 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.77e-09 | 43 |
smooth muscle myoblast | 9.77e-09 | 43 |
muscle cell | 1.37e-08 | 55 |
muscle precursor cell | 6.91e-08 | 58 |
myoblast | 6.91e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.91e-08 | 58 |
vascular associated smooth muscle cell | 2.17e-07 | 32 |