FFCP PHASE1:Hg19::chr11:65307327..65307343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65307327..65307343,- | |||
|description=CAGE_peak_at_chr11:65307327..65307343,- | |description=CAGE_peak_at_chr11:65307327..65307343,- | ||
|id=chr11:65307327..65307343,- | |id=chr11:65307327..65307343,- | ||
|ontology_enrichment_celltype=CL:0000066!8.16e-12!254;CL:0002076!1.22e-10!43;CL:0002368!3.61e-08!13;CL:0000240!9.44e-08!6;CL:0000311!9.44e-08!6;CL:0000079!9.44e-08!6;CL:0000237!9.44e-08!6;CL:0000036!9.44e-08!6;CL:0000357!9.44e-08!6;CL:0000114!9.44e-08!6;CL:0000312!6.63e-07!5;CL:0002159!8.62e-07!13 | |ontology_enrichment_celltype=CL:0000066!8.16e-12!254;CL:0002076!1.22e-10!43;CL:0002368!3.61e-08!13;CL:0000240!9.44e-08!6;CL:0000311!9.44e-08!6;CL:0000079!9.44e-08!6;CL:0000237!9.44e-08!6;CL:0000036!9.44e-08!6;CL:0000357!9.44e-08!6;CL:0000114!9.44e-08!6;CL:0000312!6.63e-07!5;CL:0002159!8.62e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.74e-11;3!CL:0000349;1.43e-10;19!CL:0000575;1.63e-08;2!CL:0000123;4.36e-08;2!CL:0000242;4.36e-08;2!CL:0002536;1.68e-07;2!CL:0000312;4.64e-07;5!CL:0002537;4.88e-07;5 | |ontology_enrichment_celltype_v019=CL:0002577;1.74e-11;3!CL:0000349;1.43e-10;19!CL:0000575;1.63e-08;2!CL:0000123;4.36e-08;2!CL:0000242;4.36e-08;2!CL:0002536;1.68e-07;2!CL:0000312;4.64e-07;5!CL:0002537;4.88e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.61e-15,253;CL:0002577,1.91e-11,3;CL:0000349,1.65e-10,19;CL:0000575,1.60e-08,2;CL:0000242,3.66e-08,2;CL:0002536,2.87e-07,2;CL:0002537,4.15e-07,5;CL:0000312,4.24e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!7.47e-08!106 | |ontology_enrichment_disease=DOID:305!7.47e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.85e-08;4!DOID:1612;3.85e-08;4 | |ontology_enrichment_disease_v019=DOID:5093;3.85e-08;4!DOID:1612;3.85e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:305,6.13e-13,106;DOID:0050687,4.51e-10,143;DOID:5093,2.27e-08,4;DOID:1612,2.27e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.66e-09!14;UBERON:0000158!4.66e-09!14;UBERON:0000064!8.05e-09!219;UBERON:0004119!1.10e-07!169;UBERON:0000925!1.10e-07!169;UBERON:0006595!1.10e-07!169;UBERON:0001004!8.62e-07!72 | |ontology_enrichment_uberon=UBERON:0005631!4.66e-09!14;UBERON:0000158!4.66e-09!14;UBERON:0000064!8.05e-09!219;UBERON:0004119!1.10e-07!169;UBERON:0000925!1.10e-07!169;UBERON:0006595!1.10e-07!169;UBERON:0001004!8.62e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.00e-12;7!UBERON:0000478;3.02e-10;24!UBERON:0001987;1.03e-08;4!UBERON:0005631;1.78e-08;10!UBERON:0000158;1.78e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0000305;3.00e-12;7!UBERON:0000478;3.02e-10;24!UBERON:0001987;1.03e-08;4!UBERON:0005631;1.78e-08;10!UBERON:0000158;1.78e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.46e-15,14;UBERON:0000158,9.46e-15,14;UBERON:0000305,3.65e-12,7;UBERON:0004871,1.32e-10,8;UBERON:0000478,3.47e-10,24;UBERON:0001987,1.10e-08,4;UBERON:0004340,1.10e-08,4;UBERON:0000995,1.93e-07,21;UBERON:0005795,4.68e-07,22;UBERON:0003975,4.68e-07,22 | |||
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| ||
|short_description=p@chr11:65307327..65307343,- | |short_description=p@chr11:65307327..65307343,- | ||
}} | }} |
Latest revision as of 00:41, 24 July 2015
Short description: | p@chr11:65307327..65307343, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65307327..65307343, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.61e-15 | 253 |
placental epithelial cell | 1.91e-11 | 3 |
extraembryonic cell | 1.65e-10 | 19 |
corneal epithelial cell | 1.60e-08 | 2 |
Merkel cell | 3.66e-08 | 2 |
amniotic epithelial cell | 2.87e-07 | 2 |
amnion mesenchymal stem cell | 4.15e-07 | 5 |
keratinocyte | 4.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.46e-15 | 14 |
membranous layer | 9.46e-15 | 14 |
amnion | 3.65e-12 | 7 |
somatic layer of lateral plate mesoderm | 1.32e-10 | 8 |
extraembryonic structure | 3.47e-10 | 24 |
placenta | 1.10e-08 | 4 |
allantois | 1.10e-08 | 4 |
uterus | 1.93e-07 | 21 |
embryonic uterus | 4.68e-07 | 22 |
internal female genitalia | 4.68e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.13e-13 | 106 |
cell type cancer | 4.51e-10 | 143 |
thoracic cancer | 2.27e-08 | 4 |
breast cancer | 2.27e-08 | 4 |