FFCP PHASE1:Hg19::chr19:17417266..17417288,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:17417266..17417288,+ | |||
|description=CAGE_peak_at_chr19:17417266..17417288,+ | |description=CAGE_peak_at_chr19:17417266..17417288,+ | ||
|id=chr19:17417266..17417288,+ | |id=chr19:17417266..17417288,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.65e-16;1!CL:0002262;6.42e-09;2!CL:0002545;6.42e-09;2!CL:1000398;6.42e-09;2!CL:0002363;6.42e-09;2!CL:0002617;6.42e-09;2 | |ontology_enrichment_celltype_v019=CL:0002591;1.65e-16;1!CL:0002262;6.42e-09;2!CL:0002545;6.42e-09;2!CL:1000398;6.42e-09;2!CL:0002363;6.42e-09;2!CL:0002617;6.42e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.93e-16,1;CL:0002545,5.08e-09,2;CL:0002262,6.42e-09,2;CL:1000398,6.42e-09,2;CL:0002617,8.09e-09,2;CL:0002363,8.74e-09,2;CL:0000008,8.74e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.42e-09;2!UBERON:0008814;6.42e-09;2!UBERON:0010056;6.42e-09;2 | |ontology_enrichment_development_v019=CL:0000008;6.42e-09;2!UBERON:0008814;6.42e-09;2!UBERON:0010056;6.42e-09;2 | ||
|ontology_enrichment_disease=DOID:14566!6.33e-07!239;DOID:162!6.71e-07!235 | |ontology_enrichment_disease=DOID:14566!6.33e-07!239;DOID:162!6.71e-07!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.43e-09;2!UBERON:0001281;6.42e-09;2!UBERON:0003497;6.42e-09;2!UBERON:0003909;6.42e-09;2!UBERON:0005800;6.42e-09;2!UBERON:0003566;6.42e-09;2!UBERON:0000078;6.42e-09;2!UBERON:0003835;6.42e-09;2!UBERON:0001777;6.42e-09;2!UBERON:0001515;6.42e-09;2!UBERON:0002012;6.42e-09;2!UBERON:0008886;6.42e-09;2!UBERON:0010313;5.26e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0002771;3.43e-09;2!UBERON:0001281;6.42e-09;2!UBERON:0003497;6.42e-09;2!UBERON:0003909;6.42e-09;2!UBERON:0005800;6.42e-09;2!UBERON:0003566;6.42e-09;2!UBERON:0000078;6.42e-09;2!UBERON:0003835;6.42e-09;2!UBERON:0001777;6.42e-09;2!UBERON:0001515;6.42e-09;2!UBERON:0002012;6.42e-09;2!UBERON:0008886;6.42e-09;2!UBERON:0010313;5.26e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.43e-09,2;UBERON:0005800,5.08e-09,2;UBERON:0001515,5.08e-09,2;UBERON:0001281,6.42e-09,2;UBERON:0003497,6.42e-09,2;UBERON:0003909,6.42e-09,2;UBERON:0003835,6.42e-09,2;UBERON:0000078,6.94e-09,2;UBERON:0007497,6.94e-09,2;UBERON:0003643,6.94e-09,2;UBERON:0003504,6.94e-09,2;UBERON:0003469,6.94e-09,2;UBERON:0003496,6.94e-09,2;UBERON:0002012,6.94e-09,2;UBERON:0008886,6.94e-09,2;UBERON:0007303,6.94e-09,2;UBERON:0002061,6.94e-09,2;UBERON:0005432,6.94e-09,2;UBERON:0004363,6.94e-09,2;UBERON:0003566,8.74e-09,2;UBERON:0001777,8.74e-09,2;UBERON:0001042,5.76e-07,10;UBERON:0009145,5.76e-07,10;UBERON:0010313,6.12e-07,10;UBERON:0002342,6.12e-07,10;UBERON:0005062,6.12e-07,10 | |||
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| ||
|short_description=p@chr19:17417266..17417288,+ | |short_description=p@chr19:17417266..17417288,+ | ||
}} | }} |
Latest revision as of 04:51, 26 July 2015
Short description: | p@chr19:17417266..17417288, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:17417266..17417288, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.93e-16 | 1 |
thoracic aorta endothelial cell | 5.08e-09 | 2 |
endothelial cell of sinusoid | 6.42e-09 | 2 |
endothelial cell of hepatic sinusoid | 6.42e-09 | 2 |
adipocyte of breast | 8.09e-09 | 2 |
keratocyte | 8.74e-09 | 2 |
migratory cranial neural crest cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.43e-09 | 2 |
segment of aorta | 5.08e-09 | 2 |
thoracic aorta | 5.08e-09 | 2 |
hepatic sinusoid | 6.42e-09 | 2 |
abdomen blood vessel | 6.42e-09 | 2 |
sinusoid | 6.42e-09 | 2 |
abdominal segment blood vessel | 6.42e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 6.94e-09 | 2 |
developing epithelial placode | 6.94e-09 | 2 |
respiratory system arterial blood vessel | 6.94e-09 | 2 |
respiratory system blood vessel | 6.94e-09 | 2 |
respiratory system artery | 6.94e-09 | 2 |
head blood vessel | 6.94e-09 | 2 |
pulmonary artery | 6.94e-09 | 2 |
pulmonary vascular system | 6.94e-09 | 2 |
pharyngeal vasculature | 6.94e-09 | 2 |
truncus arteriosus | 6.94e-09 | 2 |
aortic sac | 6.94e-09 | 2 |
pharyngeal arch artery | 6.94e-09 | 2 |
head connective tissue | 8.74e-09 | 2 |
substantia propria of cornea | 8.74e-09 | 2 |
chordate pharynx | 5.76e-07 | 10 |
pharyngeal region of foregut | 5.76e-07 | 10 |
neural crest-derived structure | 6.12e-07 | 10 |
neural crest | 6.12e-07 | 10 |
neural fold | 6.12e-07 | 10 |