FFCP PHASE1:Hg19::chr12:16500599..16500618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4257 | |EntrezGene=4257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7061 | |HGNC=7061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000539708_5end | |association_with_transcript=1bp_to_ENST00000539708_5end | ||
|cluster_id=chr12:16500599..16500618,+ | |||
|coexpression_cluster_id=C892 | |coexpression_cluster_id=C892 | ||
|description=CAGE_peak_2_at_MGST1_5end | |description=CAGE_peak_2_at_MGST1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!8.40e-15!180;CL:0000057!1.70e-12!75;CL:0000136!7.78e-11!15;CL:0000680!3.71e-10!57;CL:0000056!3.71e-10!57;CL:0000355!3.71e-10!57;CL:0000548!1.38e-09!679;CL:0000004!1.38e-09!679;CL:0000255!1.38e-09!679;CL:0000012!2.14e-09!682;CL:0000187!2.52e-09!54;CL:0000393!1.08e-08!60;CL:0000211!1.08e-08!60;CL:0000183!1.62e-07!59;CL:0002371!7.30e-07!591 | |ontology_enrichment_celltype=CL:0000055!8.40e-15!180;CL:0000057!1.70e-12!75;CL:0000136!7.78e-11!15;CL:0000680!3.71e-10!57;CL:0000056!3.71e-10!57;CL:0000355!3.71e-10!57;CL:0000548!1.38e-09!679;CL:0000004!1.38e-09!679;CL:0000255!1.38e-09!679;CL:0000012!2.14e-09!682;CL:0000187!2.52e-09!54;CL:0000393!1.08e-08!60;CL:0000211!1.08e-08!60;CL:0000183!1.62e-07!59;CL:0002371!7.30e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.28e-10;13 | |ontology_enrichment_celltype_v019=CL:0000136;3.28e-10;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.78e-13,76;CL:0000136,7.44e-11,15;CL:0000680,2.03e-10,58;CL:0000056,2.03e-10,58;CL:0000355,2.03e-10,58;CL:0000187,1.39e-09,55;CL:0000393,6.12e-09,61;CL:0000211,6.12e-09,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.64e-15!216;UBERON:0005256!1.12e-12!143;UBERON:0000914!3.04e-11!83;UBERON:0002329!3.04e-11!83;UBERON:0003077!3.04e-11!83;UBERON:0003059!3.04e-11!83;UBERON:0007282!3.04e-11!83;UBERON:0009618!3.04e-11!83;UBERON:0007285!3.04e-11!83;UBERON:0000468!3.36e-11!659;UBERON:0003104!1.03e-10!238;UBERON:0009142!1.03e-10!238;UBERON:0000486!1.38e-10!82;UBERON:0004290!1.75e-10!70;UBERON:0000475!1.76e-10!365;UBERON:0000490!4.78e-10!138;UBERON:0000481!1.32e-09!347;UBERON:0001013!9.33e-09!14;UBERON:0001134!1.31e-08!61;UBERON:0002036!1.31e-08!61;UBERON:0003082!1.31e-08!61;UBERON:0002385!1.64e-08!63;UBERON:0001015!1.64e-08!63;UBERON:0000383!1.64e-08!63;UBERON:0000926!2.08e-08!448;UBERON:0004120!2.08e-08!448;UBERON:0006603!2.08e-08!448;UBERON:0001048!3.20e-08!168;UBERON:0000480!1.36e-07!626;UBERON:0004119!1.70e-07!169;UBERON:0000925!1.70e-07!169;UBERON:0006595!1.70e-07!169;UBERON:0000922!1.93e-07!612;UBERON:0000119!2.00e-07!312;UBERON:0000467!2.00e-07!625;UBERON:0000483!3.16e-07!309;UBERON:0000923!3.99e-07!604;UBERON:0005291!3.99e-07!604;UBERON:0006598!3.99e-07!604;UBERON:0002532!3.99e-07!604;UBERON:0002050!4.73e-07!605;UBERON:0005423!4.73e-07!605 | |ontology_enrichment_uberon=UBERON:0002100!3.64e-15!216;UBERON:0005256!1.12e-12!143;UBERON:0000914!3.04e-11!83;UBERON:0002329!3.04e-11!83;UBERON:0003077!3.04e-11!83;UBERON:0003059!3.04e-11!83;UBERON:0007282!3.04e-11!83;UBERON:0009618!3.04e-11!83;UBERON:0007285!3.04e-11!83;UBERON:0000468!3.36e-11!659;UBERON:0003104!1.03e-10!238;UBERON:0009142!1.03e-10!238;UBERON:0000486!1.38e-10!82;UBERON:0004290!1.75e-10!70;UBERON:0000475!1.76e-10!365;UBERON:0000490!4.78e-10!138;UBERON:0000481!1.32e-09!347;UBERON:0001013!9.33e-09!14;UBERON:0001134!1.31e-08!61;UBERON:0002036!1.31e-08!61;UBERON:0003082!1.31e-08!61;UBERON:0002385!1.64e-08!63;UBERON:0001015!1.64e-08!63;UBERON:0000383!1.64e-08!63;UBERON:0000926!2.08e-08!448;UBERON:0004120!2.08e-08!448;UBERON:0006603!2.08e-08!448;UBERON:0001048!3.20e-08!168;UBERON:0000480!1.36e-07!626;UBERON:0004119!1.70e-07!169;UBERON:0000925!1.70e-07!169;UBERON:0006595!1.70e-07!169;UBERON:0000922!1.93e-07!612;UBERON:0000119!2.00e-07!312;UBERON:0000467!2.00e-07!625;UBERON:0000483!3.16e-07!309;UBERON:0000923!3.99e-07!604;UBERON:0005291!3.99e-07!604;UBERON:0006598!3.99e-07!604;UBERON:0002532!3.99e-07!604;UBERON:0002050!4.73e-07!605;UBERON:0005423!4.73e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.09e-09;14 | |ontology_enrichment_uberon_v019=UBERON:0001013;9.09e-09;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.15e-13,199;UBERON:0005256,6.08e-13,122;UBERON:0000490,4.52e-12,148;UBERON:0003104,3.66e-11,160;UBERON:0009142,3.66e-11,160;UBERON:0000486,7.34e-11,83;UBERON:0002329,9.66e-11,71;UBERON:0003059,9.66e-11,71;UBERON:0007282,9.66e-11,71;UBERON:0004290,9.66e-11,71;UBERON:0009618,9.66e-11,71;UBERON:0003077,1.25e-10,72;UBERON:0007285,1.25e-10,72;UBERON:0007524,2.70e-10,73;UBERON:0001134,7.42e-09,62;UBERON:0002036,7.42e-09,62;UBERON:0003082,7.42e-09,62;UBERON:0001013,9.01e-09,14;UBERON:0002385,9.36e-09,64;UBERON:0001015,9.36e-09,64;UBERON:0000383,9.36e-09,64;UBERON:0007503,1.31e-08,78;UBERON:0000119,7.45e-08,309;UBERON:0000483,1.20e-07,306;UBERON:0001048,2.28e-07,160;UBERON:0003102,8.17e-07,99 | |||
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| ||
|short_description=p2@MGST1 | |short_description=p2@MGST1 | ||
}} | }} |
Latest revision as of 15:56, 17 September 2015
Short description: | p2@MGST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MGST1_5end |
Coexpression cluster: | C892_mature_Adipocyte_liver_Hepatocyte_bile_lung_gall |
Association with transcript: | 1bp_to_ENST00000539708_5end |
EntrezGene: | MGST1 |
HGNC: | 7061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.78e-13 | 76 |
fat cell | 7.44e-11 | 15 |
muscle precursor cell | 2.03e-10 | 58 |
myoblast | 2.03e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.03e-10 | 58 |
muscle cell | 1.39e-09 | 55 |
electrically responsive cell | 6.12e-09 | 61 |
electrically active cell | 6.12e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.15e-13 | 199 |
trunk mesenchyme | 6.08e-13 | 122 |
unilaminar epithelium | 4.52e-12 | 148 |
mesenchyme | 3.66e-11 | 160 |
entire embryonic mesenchyme | 3.66e-11 | 160 |
multilaminar epithelium | 7.34e-11 | 83 |
somite | 9.66e-11 | 71 |
presomitic mesoderm | 9.66e-11 | 71 |
presumptive segmental plate | 9.66e-11 | 71 |
dermomyotome | 9.66e-11 | 71 |
trunk paraxial mesoderm | 9.66e-11 | 71 |
paraxial mesoderm | 1.25e-10 | 72 |
presumptive paraxial mesoderm | 1.25e-10 | 72 |
dense mesenchyme tissue | 2.70e-10 | 73 |
skeletal muscle tissue | 7.42e-09 | 62 |
striated muscle tissue | 7.42e-09 | 62 |
myotome | 7.42e-09 | 62 |
adipose tissue | 9.01e-09 | 14 |
muscle tissue | 9.36e-09 | 64 |
musculature | 9.36e-09 | 64 |
musculature of body | 9.36e-09 | 64 |
epithelial vesicle | 1.31e-08 | 78 |
cell layer | 7.45e-08 | 309 |
epithelium | 1.20e-07 | 306 |
primordium | 2.28e-07 | 160 |
surface structure | 8.17e-07 | 99 |