FFCP PHASE1:Hg19::chr1:41445667..41445707,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:41445667..41445707,+
|short_description=p3@CTPS
|description=CAGE_peak_3_at_CTPS_5end
|association_with_transcript=-72bp_to_ENST00000470271_5end
|EntrezGe...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1503 | |EntrezGene=1503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2519 | |HGNC=2519 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-72bp_to_ENST00000470271_5end | |||
|cluster_id=chr1:41445667..41445707,+ | |||
|description=CAGE_peak_3_at_CTPS_5end | |||
|id=chr1:41445667..41445707,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.16e-11!679;CL:0000004!1.16e-11!679;CL:0000255!1.16e-11!679;CL:0000012!1.35e-11!682;CL:0002321!1.69e-10!248;CL:0000220!2.00e-10!246;CL:0000055!2.83e-10!180;CL:0000003!4.50e-09!722;CL:0000066!2.45e-07!254;CL:0000393!3.19e-07!60;CL:0000211!3.19e-07!60;CL:0000192!3.24e-07!42;CL:0000514!3.24e-07!42;CL:0000359!5.70e-07!32;CL:0000680!5.95e-07!57;CL:0000056!5.95e-07!57;CL:0000355!5.95e-07!57;CL:0000187!8.36e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.87e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.20e-08,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.40e-14!239;DOID:162!1.27e-13!235;DOID:0050687!7.15e-09!143;DOID:0050686!4.76e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.41e-08,235;DOID:14566,1.41e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001637!5.48e-07!42;UBERON:0003509!5.48e-07!42;UBERON:0004572!5.48e-07!42;UBERON:0004290!9.38e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.87e-07,73;UBERON:0002329,3.43e-07,71;UBERON:0003059,3.43e-07,71;UBERON:0007282,3.43e-07,71;UBERON:0004290,3.43e-07,71;UBERON:0009618,3.43e-07,71;UBERON:0003077,5.70e-07,72;UBERON:0007285,5.70e-07,72 | |||
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| ||
|short_description=p3@CTPS | |||
}} | }} |
Latest revision as of 02:09, 18 September 2015
Short description: | p3@CTPS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTPS_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_ENST00000470271_5end |
EntrezGene: | CTPS |
HGNC: | 2519 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.20e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.87e-07 | 73 |
somite | 3.43e-07 | 71 |
presomitic mesoderm | 3.43e-07 | 71 |
presumptive segmental plate | 3.43e-07 | 71 |
dermomyotome | 3.43e-07 | 71 |
trunk paraxial mesoderm | 3.43e-07 | 71 |
paraxial mesoderm | 5.70e-07 | 72 |
presumptive paraxial mesoderm | 5.70e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.41e-08 | 235 |
disease of cellular proliferation | 1.41e-07 | 239 |