FFCP PHASE1:Hg19::chr1:158978805..158978820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000447473_5end | |association_with_transcript=-80bp_to_ENST00000447473_5end | ||
|cluster_id=chr1:158978805..158978820,+ | |||
|coexpression_cluster_id=C3885 | |coexpression_cluster_id=C3885 | ||
|description=CAGE_peak_23_at_IFI16_5end | |description=CAGE_peak_23_at_IFI16_5end | ||
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|ontology_enrichment_celltype=CL:0000542!1.44e-26!53;CL:0000051!1.44e-26!53;CL:0000838!2.83e-25!52;CL:0000988!1.84e-21!182;CL:0000037!3.93e-20!172;CL:0000566!3.93e-20!172;CL:0002032!1.54e-18!165;CL:0000837!1.54e-18!165;CL:0002031!1.71e-17!124;CL:0000738!4.31e-17!140;CL:0002087!1.16e-16!119;CL:0000084!9.15e-14!25;CL:0000827!9.15e-14!25;CL:0000945!3.14e-09!24;CL:0000826!3.14e-09!24;CL:0000791!3.17e-07!18;CL:0000789!3.17e-07!18;CL:0002420!3.17e-07!18;CL:0002419!3.17e-07!18;CL:0000790!3.17e-07!18;CL:0000817!7.76e-07!3 | |ontology_enrichment_celltype=CL:0000542!1.44e-26!53;CL:0000051!1.44e-26!53;CL:0000838!2.83e-25!52;CL:0000988!1.84e-21!182;CL:0000037!3.93e-20!172;CL:0000566!3.93e-20!172;CL:0002032!1.54e-18!165;CL:0000837!1.54e-18!165;CL:0002031!1.71e-17!124;CL:0000738!4.31e-17!140;CL:0002087!1.16e-16!119;CL:0000084!9.15e-14!25;CL:0000827!9.15e-14!25;CL:0000945!3.14e-09!24;CL:0000826!3.14e-09!24;CL:0000791!3.17e-07!18;CL:0000789!3.17e-07!18;CL:0002420!3.17e-07!18;CL:0002419!3.17e-07!18;CL:0000790!3.17e-07!18;CL:0000817!7.76e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.08e-14;1!CL:0000911;3.08e-14;1!CL:0000814;3.08e-14;1!CL:0000785;1.42e-13;1!CL:0000819;1.42e-13;1!CL:0000945;6.27e-13;24!CL:0000542;4.19e-08;53 | |ontology_enrichment_celltype_v019=CL:0002127;3.08e-14;1!CL:0000911;3.08e-14;1!CL:0000814;3.08e-14;1!CL:0000785;1.42e-13;1!CL:0000819;1.42e-13;1!CL:0000945;6.27e-13;24!CL:0000542;4.19e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.08e-14,1;CL:0000914,3.08e-14,1;CL:0000911,3.08e-14,1;CL:0000814,3.08e-14,1;CL:0002042,3.08e-14,1;CL:0002039,3.08e-14,1;CL:0002040,3.08e-14,1;CL:0002041,3.08e-14,1;CL:0000819,1.25e-13,1;CL:0000945,5.97e-13,24;CL:0000826,5.97e-13,24;CL:0000838,3.24e-11,52;CL:0000542,5.42e-11,53;CL:0000051,5.42e-11,53;CL:0000988,1.32e-08,177;CL:0000893,9.25e-08,2;CL:0002489,9.25e-08,2;CL:0000809,9.25e-08,2;CL:0000808,9.25e-08,2;CL:0000894,9.25e-08,2;CL:0000806,9.25e-08,2;CL:0000807,9.25e-08,2;CL:0000805,9.25e-08,2;CL:0002425,9.25e-08,2;CL:0000785,1.87e-07,2;CL:0000955,1.87e-07,2;CL:0000818,1.87e-07,2;CL:0000954,1.87e-07,2;CL:0000816,1.87e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;4.19e-08;53!CL:0002425;9.25e-08;2!CL:0000954;1.99e-07;2 | |ontology_enrichment_development_v019=CL:0000051;4.19e-08;53!CL:0002425;9.25e-08;2!CL:0000954;1.99e-07;2 | ||
|ontology_enrichment_disease=DOID:2531!1.80e-10!51;DOID:0060083!1.80e-10!51;DOID:0060058!1.90e-08!10;DOID:1240!5.42e-07!39 | |ontology_enrichment_disease=DOID:2531!1.80e-10!51;DOID:0060083!1.80e-10!51;DOID:0060058!1.90e-08!10;DOID:1240!5.42e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.42e-13;1!DOID:8675;1.42e-13;1 | |ontology_enrichment_disease_v019=DOID:0060073;1.42e-13;1!DOID:8675;1.42e-13;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.25e-13,1;DOID:8675,1.25e-13,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.19e-12;10!UBERON:0000178;3.47e-08;15!UBERON:0000179;3.47e-08;15!UBERON:0000463;3.47e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0002331;5.19e-12;10!UBERON:0000178;3.47e-08;15!UBERON:0000179;3.47e-08;15!UBERON:0000463;3.47e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.39e-12,10;UBERON:0000358,5.39e-12,10;UBERON:0000307,5.39e-12,10;UBERON:0000091,5.39e-12,10;UBERON:0000087,5.39e-12,10;UBERON:0007010,5.39e-12,10;UBERON:0007806,5.39e-12,10;UBERON:0008780,5.39e-12,10;UBERON:0005728,5.39e-12,10;UBERON:0000178,3.56e-08,15;UBERON:0000179,3.56e-08,15;UBERON:0000463,3.56e-08,15 | |||
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| ||
|short_description=p23@IFI16 | |short_description=p23@IFI16 | ||
}} | }} |
Latest revision as of 21:54, 17 September 2015
Short description: | p23@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_IFI16_5end |
Coexpression cluster: | C3885_B_chronic_NK_cord_plasma_CD4_acute |
Association with transcript: | -80bp_to_ENST00000447473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.08e-14 | 1 |
immature NK T cell | 3.08e-14 | 1 |
effector T cell | 3.08e-14 | 1 |
mature NK T cell | 3.08e-14 | 1 |
immature NK T cell stage IV | 3.08e-14 | 1 |
immature NK T cell stage I | 3.08e-14 | 1 |
immature NK T cell stage II | 3.08e-14 | 1 |
immature NK T cell stage III | 3.08e-14 | 1 |
B-1 B cell | 1.25e-13 | 1 |
lymphocyte of B lineage | 5.97e-13 | 24 |
pro-B cell | 5.97e-13 | 24 |
lymphoid lineage restricted progenitor cell | 3.24e-11 | 52 |
lymphocyte | 5.42e-11 | 53 |
common lymphoid progenitor | 5.42e-11 | 53 |
hematopoietic cell | 1.32e-08 | 177 |
thymocyte | 9.25e-08 | 2 |
double negative thymocyte | 9.25e-08 | 2 |
double-positive, alpha-beta thymocyte | 9.25e-08 | 2 |
DN4 thymocyte | 9.25e-08 | 2 |
DN1 thymic pro-T cell | 9.25e-08 | 2 |
DN2 thymocyte | 9.25e-08 | 2 |
DN3 thymocyte | 9.25e-08 | 2 |
immature single positive thymocyte | 9.25e-08 | 2 |
early T lineage precursor | 9.25e-08 | 2 |
mature B cell | 1.87e-07 | 2 |
pre-B-II cell | 1.87e-07 | 2 |
transitional stage B cell | 1.87e-07 | 2 |
small pre-B-II cell | 1.87e-07 | 2 |
immature B cell | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.39e-12 | 10 |
blastocyst | 5.39e-12 | 10 |
blastula | 5.39e-12 | 10 |
bilaminar disc | 5.39e-12 | 10 |
inner cell mass | 5.39e-12 | 10 |
cleaving embryo | 5.39e-12 | 10 |
connecting stalk | 5.39e-12 | 10 |
inner cell mass derived epiblast | 5.39e-12 | 10 |
extraembryonic mesoderm | 5.39e-12 | 10 |
blood | 3.56e-08 | 15 |
haemolymphatic fluid | 3.56e-08 | 15 |
organism substance | 3.56e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.25e-13 | 1 |
lymphosarcoma | 1.25e-13 | 1 |