FFCP PHASE1:Hg19::chr1:198979759..198979783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:198979759..198979783,- | |||
|coexpression_cluster_id=C260 | |coexpression_cluster_id=C260 | ||
|description=CAGE_peak_at_chr1:198979759..198979783,- | |description=CAGE_peak_at_chr1:198979759..198979783,- | ||
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|ontology_enrichment_celltype=CL:0000037!8.84e-16!172;CL:0000566!8.84e-16!172;CL:0002032!4.63e-15!165;CL:0000837!4.63e-15!165;CL:0000988!1.24e-14!182;CL:0000763!4.03e-11!112;CL:0000049!4.03e-11!112;CL:0002127!2.23e-07!1;CL:0000914!2.23e-07!1;CL:0000911!2.23e-07!1;CL:0000814!2.23e-07!1;CL:0002042!2.23e-07!1;CL:0002039!2.23e-07!1;CL:0002040!2.23e-07!1;CL:0002041!2.23e-07!1 | |ontology_enrichment_celltype=CL:0000037!8.84e-16!172;CL:0000566!8.84e-16!172;CL:0002032!4.63e-15!165;CL:0000837!4.63e-15!165;CL:0000988!1.24e-14!182;CL:0000763!4.03e-11!112;CL:0000049!4.03e-11!112;CL:0002127!2.23e-07!1;CL:0000914!2.23e-07!1;CL:0000911!2.23e-07!1;CL:0000814!2.23e-07!1;CL:0002042!2.23e-07!1;CL:0002039!2.23e-07!1;CL:0002040!2.23e-07!1;CL:0002041!2.23e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.53e-16;1!CL:0000817;1.53e-16;1!CL:0000911;1.53e-16;1!CL:0000814;1.53e-16;1 | |ontology_enrichment_celltype_v019=CL:0002127;1.53e-16;1!CL:0000817;1.53e-16;1!CL:0000911;1.53e-16;1!CL:0000814;1.53e-16;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.41e-16,1;CL:0000914,1.41e-16,1;CL:0000911,1.41e-16,1;CL:0000814,1.41e-16,1;CL:0002042,1.41e-16,1;CL:0002039,1.41e-16,1;CL:0002040,1.41e-16,1;CL:0002041,1.41e-16,1;CL:0000893,5.94e-09,2;CL:0002489,5.94e-09,2;CL:0000809,5.94e-09,2;CL:0000808,5.94e-09,2;CL:0000894,5.94e-09,2;CL:0000806,5.94e-09,2;CL:0000807,5.94e-09,2;CL:0000805,5.94e-09,2;CL:0002425,5.94e-09,2;CL:0000037,4.23e-08,168;CL:0000988,1.23e-07,177;CL:0002032,8.30e-07,161;CL:0000837,8.30e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002425;6.17e-09;2 | |ontology_enrichment_development_v019=CL:0002425;6.17e-09;2 | ||
|ontology_enrichment_disease=DOID:1240!1.70e-44!39;DOID:2531!2.71e-41!51;DOID:0060083!2.71e-41!51;DOID:8692!1.14e-33!31;DOID:0050686!5.03e-14!137;DOID:1036!5.08e-12!8;DOID:225!1.86e-07!1;DOID:9119!2.84e-07!1;DOID:162!3.28e-07!235;DOID:14566!5.74e-07!239 | |ontology_enrichment_disease=DOID:1240!1.70e-44!39;DOID:2531!2.71e-41!51;DOID:0060083!2.71e-41!51;DOID:8692!1.14e-33!31;DOID:0050686!5.03e-14!137;DOID:1036!5.08e-12!8;DOID:225!1.86e-07!1;DOID:9119!2.84e-07!1;DOID:162!3.28e-07!235;DOID:14566!5.74e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.25e-26;39!DOID:2531;1.68e-20;51!DOID:0060083;1.68e-20;51!DOID:225;9.58e-17;1!DOID:8692;1.72e-16;31!DOID:9119;2.63e-16;1!DOID:74;4.89e-09;2!DOID:1036;9.31e-09;8 | |ontology_enrichment_disease_v019=DOID:1240;2.25e-26;39!DOID:2531;1.68e-20;51!DOID:0060083;1.68e-20;51!DOID:225;9.58e-17;1!DOID:8692;1.72e-16;31!DOID:9119;2.63e-16;1!DOID:74;4.89e-09;2!DOID:1036;9.31e-09;8 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,8.09e-31,39;DOID:2531,5.55e-29,51;DOID:0060083,5.55e-29,51;DOID:8692,1.72e-17,31;DOID:225,8.86e-17,1;DOID:9119,2.63e-16,1;DOID:0050686,3.78e-10,137;DOID:74,4.70e-09,2;DOID:1036,9.31e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0002370!7.28e-14!4;UBERON:0005058!7.28e-14!4;UBERON:0009113!7.28e-14!4;UBERON:0003295!7.28e-14!4;UBERON:0005562!7.28e-14!4;UBERON:0004177!2.15e-13!7;UBERON:0003351!2.10e-09!6 | |ontology_enrichment_uberon=UBERON:0002370!7.28e-14!4;UBERON:0005058!7.28e-14!4;UBERON:0009113!7.28e-14!4;UBERON:0003295!7.28e-14!4;UBERON:0005562!7.28e-14!4;UBERON:0004177!2.15e-13!7;UBERON:0003351!2.10e-09!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.17e-09;2!UBERON:0005058;6.17e-09;2!UBERON:0009113;6.17e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;6.17e-09;2!UBERON:0005058;6.17e-09;2!UBERON:0009113;6.17e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.59e-16,4;UBERON:0005058,3.59e-16,4;UBERON:0009113,3.59e-16,4;UBERON:0003295,3.59e-16,4;UBERON:0005562,3.59e-16,4;UBERON:0003351,4.16e-11,6;UBERON:0004177,1.18e-09,7;UBERON:0005057,1.18e-09,7;UBERON:0000974,5.11e-07,10;UBERON:0003408,5.11e-07,10;UBERON:0001042,5.11e-07,10;UBERON:0009145,5.11e-07,10 | |||
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|short_description=p@chr1:198979759..198979783,- | |short_description=p@chr1:198979759..198979783,- | ||
}} | }} |
Latest revision as of 01:58, 28 July 2015
Short description: | p@chr1:198979759..198979783, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:198979759..198979783, - |
Coexpression cluster: | C260_acute_chronic_Natural_NK_Basophils_biphenotypic_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.41e-16 | 1 |
immature NK T cell | 1.41e-16 | 1 |
effector T cell | 1.41e-16 | 1 |
mature NK T cell | 1.41e-16 | 1 |
immature NK T cell stage IV | 1.41e-16 | 1 |
immature NK T cell stage I | 1.41e-16 | 1 |
immature NK T cell stage II | 1.41e-16 | 1 |
immature NK T cell stage III | 1.41e-16 | 1 |
thymocyte | 5.94e-09 | 2 |
double negative thymocyte | 5.94e-09 | 2 |
double-positive, alpha-beta thymocyte | 5.94e-09 | 2 |
DN4 thymocyte | 5.94e-09 | 2 |
DN1 thymic pro-T cell | 5.94e-09 | 2 |
DN2 thymocyte | 5.94e-09 | 2 |
DN3 thymocyte | 5.94e-09 | 2 |
immature single positive thymocyte | 5.94e-09 | 2 |
early T lineage precursor | 5.94e-09 | 2 |
hematopoietic stem cell | 4.23e-08 | 168 |
hematopoietic cell | 1.23e-07 | 177 |
hematopoietic oligopotent progenitor cell | 8.30e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.30e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.59e-16 | 4 |
hemolymphoid system gland | 3.59e-16 | 4 |
thymic region | 3.59e-16 | 4 |
pharyngeal gland | 3.59e-16 | 4 |
thymus primordium | 3.59e-16 | 4 |
pharyngeal epithelium | 4.16e-11 | 6 |
hemopoietic organ | 1.18e-09 | 7 |
immune organ | 1.18e-09 | 7 |
neck | 5.11e-07 | 10 |
gland of gut | 5.11e-07 | 10 |
chordate pharynx | 5.11e-07 | 10 |
pharyngeal region of foregut | 5.11e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.09e-31 | 39 |
hematologic cancer | 5.55e-29 | 51 |
immune system cancer | 5.55e-29 | 51 |
myeloid leukemia | 1.72e-17 | 31 |
syndrome | 8.86e-17 | 1 |
acute myeloid leukemia | 2.63e-16 | 1 |
organ system cancer | 3.78e-10 | 137 |
hematopoietic system disease | 4.70e-09 | 2 |
chronic leukemia | 9.31e-09 | 8 |