FFCP PHASE1:Hg19::chr22:18324833..18324838,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57553 | |EntrezGene=57553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24694 | |HGNC=24694 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-284bp_to_BC064400_5end | |association_with_transcript=-284bp_to_BC064400_5end | ||
|cluster_id=chr22:18324833..18324838,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_29_at_MICAL3_5end | |description=CAGE_peak_29_at_MICAL3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002535!2.59e-12!2 | |ontology_enrichment_celltype=CL:0002535!2.59e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.48e-07;12 | |ontology_enrichment_celltype_v019=CL:0000182;7.48e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.48e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.47e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;2.47e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006955!2.59e-12!2;UBERON:0004801!2.59e-12!2;UBERON:0005172!8.46e-07!55;UBERON:0005173!8.46e-07!55 | |ontology_enrichment_uberon=UBERON:0006955!2.59e-12!2;UBERON:0004801!2.59e-12!2;UBERON:0005172!8.46e-07!55;UBERON:0005173!8.46e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.91e-15;19!UBERON:0006925;4.91e-15;19!UBERON:0002423;1.03e-11;25!UBERON:0002365;5.96e-10;31!UBERON:0002330;5.96e-10;31!UBERON:0002368;2.42e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0002107;4.91e-15;19!UBERON:0006925;4.91e-15;19!UBERON:0002423;1.03e-11;25!UBERON:0002365;5.96e-10;31!UBERON:0002330;5.96e-10;31!UBERON:0002368;2.42e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.91e-15,19;UBERON:0006925,4.91e-15,19;UBERON:0008836,4.91e-15,19;UBERON:0008835,3.77e-13,22;UBERON:0003894,3.77e-13,22;UBERON:0009854,1.25e-12,23;UBERON:0007499,1.03e-11,25;UBERON:0009497,1.03e-11,25;UBERON:0000015,1.03e-11,25;UBERON:0002423,1.03e-11,25;UBERON:0006235,1.03e-11,25;UBERON:0004161,1.03e-11,25;UBERON:0009856,2.63e-11,26;UBERON:0002365,1.15e-09,31;UBERON:0002330,1.15e-09,31;UBERON:0002368,1.09e-08,35;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p29@MICAL3 | |short_description=p29@MICAL3 | ||
}} | }} |
Latest revision as of 01:38, 19 September 2015
Short description: | p29@MICAL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_MICAL3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -284bp_to_BC064400_5end |
EntrezGene: | MICAL3 |
HGNC: | 24694 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.91e-15 | 19 |
digestive gland | 4.91e-15 | 19 |
liver bud | 4.91e-15 | 19 |
hepatic diverticulum | 3.77e-13 | 22 |
liver primordium | 3.77e-13 | 22 |
digestive tract diverticulum | 1.25e-12 | 23 |
epithelial sac | 1.03e-11 | 25 |
epithelium of foregut-midgut junction | 1.03e-11 | 25 |
anatomical boundary | 1.03e-11 | 25 |
hepatobiliary system | 1.03e-11 | 25 |
foregut-midgut junction | 1.03e-11 | 25 |
septum transversum | 1.03e-11 | 25 |
sac | 2.63e-11 | 26 |
exocrine gland | 1.15e-09 | 31 |
exocrine system | 1.15e-09 | 31 |
endocrine gland | 1.09e-08 | 35 |
endocrine system | 5.42e-07 | 45 |