FFCP PHASE1:Hg19::chrX:11786438..11786451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10943 | |EntrezGene=10943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7370 | |HGNC=7370 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000473380_5end | |association_with_transcript=6bp_to_ENST00000473380_5end | ||
|cluster_id=chrX:11786438..11786451,+ | |||
|coexpression_cluster_id=C156 | |coexpression_cluster_id=C156 | ||
|description=CAGE_peak_9_at_MSL3_5end | |description=CAGE_peak_9_at_MSL3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!2.81e-19!24;CL:0000826!2.81e-19!24;CL:0000542!3.94e-11!53;CL:0000051!3.94e-11!53;CL:0000838!1.60e-09!52;CL:0000784!1.49e-07!3 | |ontology_enrichment_celltype=CL:0000945!2.81e-19!24;CL:0000826!2.81e-19!24;CL:0000542!3.94e-11!53;CL:0000051!3.94e-11!53;CL:0000838!1.60e-09!52;CL:0000784!1.49e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.49e-37;24!CL:0000946;2.16e-26;1!CL:0000786;2.16e-26;1!CL:0000542;6.32e-08;53 | |ontology_enrichment_celltype_v019=CL:0000945;3.49e-37;24!CL:0000946;2.16e-26;1!CL:0000786;2.16e-26;1!CL:0000542;6.32e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.38e-37,24;CL:0000826,3.38e-37,24;CL:0000946,2.16e-26,1;CL:0000786,2.16e-26,1;CL:0000980,2.16e-26,1;CL:0000838,2.59e-17,52;CL:0000542,5.44e-17,53;CL:0000051,5.44e-17,53;CL:0000785,6.43e-14,2;CL:0000955,6.43e-14,2;CL:0000818,6.43e-14,2;CL:0000954,6.43e-14,2;CL:0000816,6.43e-14,2;CL:0000817,1.01e-09,3;CL:0002087,8.32e-08,115;CL:0002031,1.75e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;6.43e-14;2!CL:0000051;6.32e-08;53 | |ontology_enrichment_development_v019=CL:0000954;6.43e-14;2!CL:0000051;6.32e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;5.93e-26;1!DOID:0050177;5.93e-26;1!DOID:0050427;5.93e-26;1 | |ontology_enrichment_disease_v019=DOID:630;5.93e-26;1!DOID:0050177;5.93e-26;1!DOID:0050427;5.93e-26;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,5.93e-26,1;DOID:0050177,5.93e-26,1;DOID:0050427,5.93e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.93e-08!115;UBERON:0002106!9.10e-08!3;UBERON:0004854!9.10e-08!3;UBERON:0009034!9.10e-08!3;UBERON:0002095!9.10e-08!3;UBERON:0004782!9.10e-08!3;UBERON:0003281!9.10e-08!3;UBERON:0009664!9.10e-08!3;UBERON:0002296!9.10e-08!3;UBERON:0005602!9.10e-08!3;UBERON:0001179!9.10e-08!3;UBERON:0006293!9.10e-08!3;UBERON:0004177!8.35e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!3.93e-08!115;UBERON:0002106!9.10e-08!3;UBERON:0004854!9.10e-08!3;UBERON:0009034!9.10e-08!3;UBERON:0002095!9.10e-08!3;UBERON:0004782!9.10e-08!3;UBERON:0003281!9.10e-08!3;UBERON:0009664!9.10e-08!3;UBERON:0002296!9.10e-08!3;UBERON:0005602!9.10e-08!3;UBERON:0001179!9.10e-08!3;UBERON:0006293!9.10e-08!3;UBERON:0004177!8.35e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.54e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.54e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.54e-09,3;UBERON:0004854,1.54e-09,3;UBERON:0009034,1.54e-09,3;UBERON:0002095,1.54e-09,3;UBERON:0004782,1.54e-09,3;UBERON:0003281,1.54e-09,3;UBERON:0009664,1.54e-09,3;UBERON:0002296,1.54e-09,3;UBERON:0005602,1.54e-09,3;UBERON:0001179,1.54e-09,3;UBERON:0006293,1.54e-09,3 | |||
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|short_description=p9@MSL3 | |short_description=p9@MSL3 | ||
}} | }} |
Latest revision as of 04:21, 19 September 2015
Short description: | p9@MSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MSL3_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | 6bp_to_ENST00000473380_5end |
EntrezGene: | MSL3 |
HGNC: | 7370 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.38e-37 | 24 |
pro-B cell | 3.38e-37 | 24 |
antibody secreting cell | 2.16e-26 | 1 |
plasma cell | 2.16e-26 | 1 |
plasmablast | 2.16e-26 | 1 |
lymphoid lineage restricted progenitor cell | 2.59e-17 | 52 |
lymphocyte | 5.44e-17 | 53 |
common lymphoid progenitor | 5.44e-17 | 53 |
mature B cell | 6.43e-14 | 2 |
pre-B-II cell | 6.43e-14 | 2 |
transitional stage B cell | 6.43e-14 | 2 |
small pre-B-II cell | 6.43e-14 | 2 |
immature B cell | 6.43e-14 | 2 |
precursor B cell | 1.01e-09 | 3 |
nongranular leukocyte | 8.32e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.75e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.54e-09 | 3 |
gastrointestinal system mesentery | 1.54e-09 | 3 |
stomach region | 1.54e-09 | 3 |
mesentery | 1.54e-09 | 3 |
gastrointestinal system serosa | 1.54e-09 | 3 |
mesentery of stomach | 1.54e-09 | 3 |
gut mesentery | 1.54e-09 | 3 |
dorsal mesentery | 1.54e-09 | 3 |
dorsal mesogastrium | 1.54e-09 | 3 |
peritoneal cavity | 1.54e-09 | 3 |
spleen primordium | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.93e-26 | 1 |
monogenic disease | 5.93e-26 | 1 |
xeroderma pigmentosum | 5.93e-26 | 1 |