FFCP PHASE1:Hg19::chr9:27005640..27005656,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64922 | |EntrezGene=64922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23379 | |HGNC=23379 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H756 | |UniProt=Q9H756 | ||
|association_with_transcript=34bp_to_ENST00000380055,NM_022901,uc003zqh.2_5end | |association_with_transcript=34bp_to_ENST00000380055,NM_022901,uc003zqh.2_5end | ||
|cluster_id=chr9:27005640..27005656,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_2_at_LRRC19_5end | |description=CAGE_peak_2_at_LRRC19_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.73e-23;1 | |ontology_enrichment_development_v019=UBERON:0001045;5.73e-23;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.13e-21!27;UBERON:0001155!1.38e-17!9;UBERON:0005409!2.65e-16!35;UBERON:0000059!1.96e-14!11;UBERON:0001154!5.57e-11!1;UBERON:0001153!5.57e-11!1;UBERON:0001301!1.21e-10!1 | |ontology_enrichment_uberon=UBERON:0000160!3.13e-21!27;UBERON:0001155!1.38e-17!9;UBERON:0005409!2.65e-16!35;UBERON:0000059!1.96e-14!11;UBERON:0001154!5.57e-11!1;UBERON:0001153!5.57e-11!1;UBERON:0001301!1.21e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.77e-59;17!UBERON:0005409;1.36e-46;22!UBERON:0002108;2.23e-40;4!UBERON:0001155;2.94e-39;9!UBERON:0000059;3.08e-32;11!UBERON:0004921;1.93e-28;33!UBERON:0001154;5.73e-23;1!UBERON:0001153;5.73e-23;1!UBERON:0009854;5.73e-23;1!UBERON:0001555;8.64e-12;54!UBERON:0002114;1.12e-08;2!UBERON:0001007;7.66e-08;81!UBERON:0009856;9.90e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.77e-59;17!UBERON:0005409;1.36e-46;22!UBERON:0002108;2.23e-40;4!UBERON:0001155;2.94e-39;9!UBERON:0000059;3.08e-32;11!UBERON:0004921;1.93e-28;33!UBERON:0001154;5.73e-23;1!UBERON:0001153;5.73e-23;1!UBERON:0009854;5.73e-23;1!UBERON:0001555;8.64e-12;54!UBERON:0002114;1.12e-08;2!UBERON:0001007;7.66e-08;81!UBERON:0009856;9.90e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.77e-59,17;UBERON:0005409,3.08e-41,25;UBERON:0002108,2.23e-40,4;UBERON:0001155,2.94e-39,9;UBERON:0000059,3.08e-32,11;UBERON:0001154,6.40e-23,1;UBERON:0001153,6.40e-23,1;UBERON:0001045,6.40e-23,1;UBERON:0004921,5.84e-09,118;UBERON:0002114,1.12e-08,2;UBERON:0001007,2.93e-07,145;UBERON:0001555,2.93e-07,145;UBERON:0007026,2.93e-07,145 | |||
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|short_description=p2@LRRC19 | |short_description=p2@LRRC19 | ||
}} | }} |
Latest revision as of 00:50, 17 September 2015
Short description: | p2@LRRC19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRC19_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 34bp_to_ENST00000380055, NM_022901, uc003zqh.2_5end |
EntrezGene: | LRRC19 |
HGNC: | 23379 |
UniProt: | Q9H756 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.77e-59 | 17 |
gastrointestinal system | 3.08e-41 | 25 |
small intestine | 2.23e-40 | 4 |
colon | 2.94e-39 | 9 |
large intestine | 3.08e-32 | 11 |
vermiform appendix | 6.40e-23 | 1 |
caecum | 6.40e-23 | 1 |
midgut | 6.40e-23 | 1 |
subdivision of digestive tract | 5.84e-09 | 118 |
duodenum | 1.12e-08 | 2 |
digestive system | 2.93e-07 | 145 |
digestive tract | 2.93e-07 | 145 |
primitive gut | 2.93e-07 | 145 |