FFCP PHASE1:Hg19::chr11:35211386..35211412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000534296,uc010res.1,uc010ret.1,uc010reu.1_5end | |association_with_transcript=4bp_to_ENST00000534296,uc010res.1,uc010ret.1,uc010reu.1_5end | ||
|cluster_id=chr11:35211386..35211412,+ | |||
|coexpression_cluster_id=C620 | |coexpression_cluster_id=C620 | ||
|description=CAGE_peak_10_at_CD44_5end | |description=CAGE_peak_10_at_CD44_5end | ||
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|ontology_enrichment_celltype=CL:0000557!6.55e-17!71;CL:0002057!3.26e-16!42;CL:0000839!1.79e-15!70;CL:0000766!2.82e-15!76;CL:0002009!3.64e-15!65;CL:0000860!7.51e-15!45;CL:0002194!1.72e-14!63;CL:0000576!1.72e-14!63;CL:0000040!1.72e-14!63;CL:0000559!1.72e-14!63 | |ontology_enrichment_celltype=CL:0000557!6.55e-17!71;CL:0002057!3.26e-16!42;CL:0000839!1.79e-15!70;CL:0000766!2.82e-15!76;CL:0002009!3.64e-15!65;CL:0000860!7.51e-15!45;CL:0002194!1.72e-14!63;CL:0000576!1.72e-14!63;CL:0000040!1.72e-14!63;CL:0000559!1.72e-14!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.18e-20;33!CL:0002057;8.18e-20;33!CL:0000473;1.52e-16;39!CL:0000234;1.52e-16;39!CL:0000576;1.70e-09;48!CL:0000766;5.11e-08;69 | |ontology_enrichment_celltype_v019=CL:0000860;8.18e-20;33!CL:0002057;8.18e-20;33!CL:0000473;1.52e-16;39!CL:0000234;1.52e-16;39!CL:0000576;1.70e-09;48!CL:0000766;5.11e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.44e-18,67;CL:0000473,7.39e-18,48;CL:0000234,7.39e-18,48;CL:0000860,1.05e-17,42;CL:0002057,1.05e-17,42;CL:0000839,1.12e-16,66;CL:0002009,9.41e-16,61;CL:0000766,2.23e-15,72;CL:0002194,5.76e-15,59;CL:0000576,5.76e-15,59;CL:0000040,5.76e-15,59;CL:0000559,5.76e-15,59;CL:0000763,5.72e-07,108;CL:0000049,5.72e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;8.01e-14;42 | |ontology_enrichment_development_v019=CL:0002057;8.01e-14;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.36e-15!80;UBERON:0002204!2.62e-14!167;UBERON:0004765!5.99e-13!101;UBERON:0001434!5.99e-13!101;UBERON:0001474!1.11e-12!86;UBERON:0002390!2.52e-10!102;UBERON:0003061!2.52e-10!102;UBERON:0002193!6.79e-09!112;UBERON:0003102!8.73e-08!95 | |ontology_enrichment_uberon=UBERON:0002371!2.36e-15!80;UBERON:0002204!2.62e-14!167;UBERON:0004765!5.99e-13!101;UBERON:0001434!5.99e-13!101;UBERON:0001474!1.11e-12!86;UBERON:0002390!2.52e-10!102;UBERON:0003061!2.52e-10!102;UBERON:0002193!6.79e-09!112;UBERON:0003102!8.73e-08!95 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.24e-17,76;UBERON:0004765,6.31e-15,90;UBERON:0002204,1.40e-14,167;UBERON:0001474,2.89e-14,82;UBERON:0001434,9.34e-14,100;UBERON:0002405,2.23e-11,93;UBERON:0002390,2.24e-10,98;UBERON:0003061,2.24e-10,98;UBERON:0002193,6.10e-09,108 | |||
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| ||
|short_description=p10@CD44 | |short_description=p10@CD44 | ||
}} | }} |
Latest revision as of 19:18, 17 September 2015
Short description: | p10@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | 4bp_to_ENST00000534296, uc010res.1, uc010ret.1, uc010reu.1_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.44e-18 | 67 |
defensive cell | 7.39e-18 | 48 |
phagocyte | 7.39e-18 | 48 |
classical monocyte | 1.05e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-17 | 42 |
myeloid lineage restricted progenitor cell | 1.12e-16 | 66 |
macrophage dendritic cell progenitor | 9.41e-16 | 61 |
myeloid leukocyte | 2.23e-15 | 72 |
monopoietic cell | 5.76e-15 | 59 |
monocyte | 5.76e-15 | 59 |
monoblast | 5.76e-15 | 59 |
promonocyte | 5.76e-15 | 59 |
myeloid cell | 5.72e-07 | 108 |
common myeloid progenitor | 5.72e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.24e-17 | 76 |
skeletal element | 6.31e-15 | 90 |
musculoskeletal system | 1.40e-14 | 167 |
bone element | 2.89e-14 | 82 |
skeletal system | 9.34e-14 | 100 |
immune system | 2.23e-11 | 93 |
hematopoietic system | 2.24e-10 | 98 |
blood island | 2.24e-10 | 98 |
hemolymphoid system | 6.10e-09 | 108 |