FFCP PHASE1:Hg19::chr1:11969533..11969537,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:11969533..11969537,- | |||
|description=CAGE_peak_at_chr1:11969533..11969537,- | |description=CAGE_peak_at_chr1:11969533..11969537,- | ||
|id=chr1:11969533..11969537,- | |id=chr1:11969533..11969537,- | ||
|ontology_enrichment_celltype=CL:0000037!4.50e-13!172;CL:0000566!4.50e-13!172;CL:0002032!6.43e-13!165;CL:0000837!6.43e-13!165;CL:0000988!5.48e-12!182;CL:0002031!1.38e-10!124;CL:0002087!1.88e-10!119;CL:0000738!1.21e-09!140;CL:0000542!1.82e-07!53;CL:0000051!1.82e-07!53;CL:0000838!6.62e-07!52 | |ontology_enrichment_celltype=CL:0000037!4.50e-13!172;CL:0000566!4.50e-13!172;CL:0002032!6.43e-13!165;CL:0000837!6.43e-13!165;CL:0000988!5.48e-12!182;CL:0002031!1.38e-10!124;CL:0002087!1.88e-10!119;CL:0000738!1.21e-09!140;CL:0000542!1.82e-07!53;CL:0000051!1.82e-07!53;CL:0000838!6.62e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002393;6.58e-16;6!CL:0002397;6.58e-16;6!CL:0000623;3.61e-14;3!CL:0002127;2.96e-11;1!CL:0000037;2.96e-11;1!CL:0000911;2.96e-11;1!CL:0001024;2.96e-11;1!CL:0000814;2.96e-11;1 | |ontology_enrichment_celltype_v019=CL:0002393;6.58e-16;6!CL:0002397;6.58e-16;6!CL:0000623;3.61e-14;3!CL:0002127;2.96e-11;1!CL:0000037;2.96e-11;1!CL:0000911;2.96e-11;1!CL:0001024;2.96e-11;1!CL:0000814;2.96e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.73e-14,3;CL:0000825,4.73e-14,3;CL:0002127,1.60e-11,1;CL:0000914,1.60e-11,1;CL:0000911,1.60e-11,1;CL:0000814,1.60e-11,1;CL:0002042,1.60e-11,1;CL:0002039,1.60e-11,1;CL:0002040,1.60e-11,1;CL:0002041,1.60e-11,1;CL:0001024,3.63e-11,1;CL:0002393,1.10e-10,9;CL:0002397,1.10e-10,9;CL:0000037,1.88e-09,168;CL:0000988,7.34e-09,177;CL:0002032,1.86e-08,161;CL:0000837,1.86e-08,161;CL:0002087,3.27e-07,115;CL:0002031,7.45e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.96e-11;1 | |ontology_enrichment_development_v019=UBERON:0008425;2.96e-11;1 | ||
|ontology_enrichment_disease=DOID:162!2.76e-20!235;DOID:14566!2.65e-19!239;DOID:0050686!2.15e-14!137;DOID:2531!4.85e-13!51;DOID:0060083!4.85e-13!51;DOID:0050687!1.40e-09!143;DOID:305!7.39e-08!106;DOID:1240!3.03e-07!39 | |ontology_enrichment_disease=DOID:162!2.76e-20!235;DOID:14566!2.65e-19!239;DOID:0050686!2.15e-14!137;DOID:2531!4.85e-13!51;DOID:0060083!4.85e-13!51;DOID:0050687!1.40e-09!143;DOID:305!7.39e-08!106;DOID:1240!3.03e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,9.41e-07,51;DOID:0060083,9.41e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001474!5.85e-07!86 | |ontology_enrichment_uberon=UBERON:0001474!5.85e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.96e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0007195;2.96e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.44e-11,1 | |||
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| ||
|short_description=p@chr1:11969533..11969537,- | |short_description=p@chr1:11969533..11969537,- | ||
}} | }} |
Latest revision as of 20:17, 27 July 2015
Short description: | p@chr1:11969533..11969537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:11969533..11969537, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.73e-14 | 3 |
pro-NK cell | 4.73e-14 | 3 |
innate effector T cell | 1.60e-11 | 1 |
immature NK T cell | 1.60e-11 | 1 |
effector T cell | 1.60e-11 | 1 |
mature NK T cell | 1.60e-11 | 1 |
immature NK T cell stage IV | 1.60e-11 | 1 |
immature NK T cell stage I | 1.60e-11 | 1 |
immature NK T cell stage II | 1.60e-11 | 1 |
immature NK T cell stage III | 1.60e-11 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.63e-11 | 1 |
intermediate monocyte | 1.10e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.10e-10 | 9 |
hematopoietic stem cell | 1.88e-09 | 168 |
hematopoietic cell | 7.34e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.86e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-08 | 161 |
nongranular leukocyte | 3.27e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.45e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.44e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.41e-07 | 51 |
immune system cancer | 9.41e-07 | 51 |