FFCP PHASE1:Hg19::chr12:114400163..114400173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114400163..114400173,- | |||
|coexpression_cluster_id=C507 | |coexpression_cluster_id=C507 | ||
|description=CAGE_peak_at_chr12:114400163..114400173,- | |description=CAGE_peak_at_chr12:114400163..114400173,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!2.38e-09!5;CL:0000080!3.01e-08!6 | |ontology_enrichment_celltype=CL:0000453!2.38e-09!5;CL:0000080!3.01e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.43e-07;25 | |ontology_enrichment_celltype_v019=CL:0000084;2.43e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.35e-07,25;CL:0000827,2.35e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.08e-07;7 | |ontology_enrichment_development_v019=UBERON:0004872;5.08e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.70e-40;1!DOID:0060061;2.70e-40;1!DOID:8691;2.70e-40;1!DOID:0060058;7.21e-17;10 | |ontology_enrichment_disease_v019=DOID:0060060;2.70e-40;1!DOID:0060061;2.70e-40;1!DOID:8691;2.70e-40;1!DOID:0060058;7.21e-17;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.21e-40,1;DOID:0060061,2.21e-40,1;DOID:8691,2.21e-40,1;DOID:0060058,6.93e-17,10;DOID:2531,8.20e-08,51;DOID:0060083,8.20e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0006947!1.44e-07!3;UBERON:0004054!1.44e-07!3 | |ontology_enrichment_uberon=UBERON:0006947!1.44e-07!3;UBERON:0004054!1.44e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
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|short_description=p@chr12:114400163..114400173,- | |short_description=p@chr12:114400163..114400173,- | ||
}} | }} |
Latest revision as of 05:16, 24 July 2015
Short description: | p@chr12:114400163..114400173, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:114400163..114400173, - |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.35e-07 | 25 |
pro-T cell | 2.35e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.21e-40 | 1 |
cutaneous T cell lymphoma | 2.21e-40 | 1 |
mycosis fungoides | 2.21e-40 | 1 |
lymphoma | 6.93e-17 | 10 |
hematologic cancer | 8.20e-08 | 51 |
immune system cancer | 8.20e-08 | 51 |