FFCP PHASE1:Hg19::chr1:235813034..235813097,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2786 | |EntrezGene=2786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4407 | |HGNC=4407 | ||
|TSSclassifier=strong | |||
|UniProt=P50150,B1APZ0 | |UniProt=P50150,B1APZ0 | ||
|association_with_transcript=195bp_to_ENST00000391854,NM_001098722,uc001hxe.3_5end | |association_with_transcript=195bp_to_ENST00000391854,NM_001098722,uc001hxe.3_5end | ||
|cluster_id=chr1:235813034..235813097,- | |||
|coexpression_cluster_id=C1472 | |coexpression_cluster_id=C1472 | ||
|description=CAGE_peak_1_at_GNG4_5end | |description=CAGE_peak_1_at_GNG4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002319!4.41e-11!25 | |ontology_enrichment_celltype=CL:0002319!4.41e-11!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.20e-12;25 | |ontology_enrichment_celltype_v019=CL:0002319;2.20e-12;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.95e-12,25;CL:0000047,4.55e-08,8;CL:0000133,2.72e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.42e-12;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.42e-12;82 | ||
|ontology_enrichment_disease=DOID:0050687!7.41e-15!143;DOID:162!6.30e-11!235;DOID:14566!2.64e-10!239;DOID:305!1.03e-09!106 | |ontology_enrichment_disease=DOID:0050687!7.41e-15!143;DOID:162!6.30e-11!235;DOID:14566!2.64e-10!239;DOID:305!1.03e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:171;6.61e-08;10 | |ontology_enrichment_disease_v019=DOID:171;6.61e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.12e-14,143;DOID:162,2.77e-13,235;DOID:14566,2.31e-12,239;DOID:305,4.72e-09,106;DOID:171,7.05e-08,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.16e-22;32!UBERON:0003528;5.74e-22;34!UBERON:0002020;5.74e-22;34!UBERON:0002791;7.01e-22;32!UBERON:0001893;9.53e-22;34!UBERON:0002780;2.62e-21;41!UBERON:0001890;2.62e-21;41!UBERON:0000073;1.32e-20;53!UBERON:0002616;1.32e-20;53!UBERON:0000956;5.09e-19;25!UBERON:0000203;5.09e-19;25!UBERON:0002619;1.87e-17;22!UBERON:0000955;9.52e-17;68!UBERON:0001016;3.16e-16;83!UBERON:0001950;4.26e-16;20!UBERON:0001017;6.36e-16;75!UBERON:0000922;5.17e-12;49!UBERON:0004732;5.14e-09;13!UBERON:0004733;2.09e-08;12!UBERON:0002028;2.09e-08;12!UBERON:0000125;1.05e-07;9!UBERON:0002308;1.05e-07;9!UBERON:0002420;1.17e-07;9!UBERON:0007245;1.17e-07;9!UBERON:0010009;1.17e-07;9!UBERON:0010011;1.17e-07;9!UBERON:0000454;1.17e-07;9!UBERON:0011216;2.28e-07;132!UBERON:0002680;8.09e-07;9!UBERON:0001895;8.09e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001869;3.16e-22;32!UBERON:0003528;5.74e-22;34!UBERON:0002020;5.74e-22;34!UBERON:0002791;7.01e-22;32!UBERON:0001893;9.53e-22;34!UBERON:0002780;2.62e-21;41!UBERON:0001890;2.62e-21;41!UBERON:0000073;1.32e-20;53!UBERON:0002616;1.32e-20;53!UBERON:0000956;5.09e-19;25!UBERON:0000203;5.09e-19;25!UBERON:0002619;1.87e-17;22!UBERON:0000955;9.52e-17;68!UBERON:0001016;3.16e-16;83!UBERON:0001950;4.26e-16;20!UBERON:0001017;6.36e-16;75!UBERON:0000922;5.17e-12;49!UBERON:0004732;5.14e-09;13!UBERON:0004733;2.09e-08;12!UBERON:0002028;2.09e-08;12!UBERON:0000125;1.05e-07;9!UBERON:0002308;1.05e-07;9!UBERON:0002420;1.17e-07;9!UBERON:0007245;1.17e-07;9!UBERON:0010009;1.17e-07;9!UBERON:0010011;1.17e-07;9!UBERON:0000454;1.17e-07;9!UBERON:0011216;2.28e-07;132!UBERON:0002680;8.09e-07;9!UBERON:0001895;8.09e-07;9 | ||
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| ||
|short_description=p1@GNG4 | |short_description=p1@GNG4 | ||
}} | }} |
Latest revision as of 12:45, 16 September 2015
Short description: | p1@GNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG4_5end |
Coexpression cluster: | C1472_nonsmall_neuroblastoma_small_tubular_carcinoid_smallcell_merkel |
Association with transcript: | 195bp_to_ENST00000391854, NM_001098722, uc001hxe.3_5end |
EntrezGene: | GNG4 |
HGNC: | 4407 |
UniProt: | P50150B1APZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.95e-12 | 25 |
neuronal stem cell | 4.55e-08 | 8 |
neurectodermal cell | 2.72e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.12e-14 | 143 |
cancer | 2.77e-13 | 235 |
disease of cellular proliferation | 2.31e-12 | 239 |
carcinoma | 4.72e-09 | 106 |
neuroectodermal tumor | 7.05e-08 | 10 |