FFCP PHASE1:Hg19::chr9:104187899..104187908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=229 | |EntrezGene=229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=417 | |HGNC=417 | ||
|TSSclassifier=strong | |||
|UniProt=P05062 | |UniProt=P05062 | ||
|association_with_transcript=-77bp_to_X00270_5end | |association_with_transcript=-77bp_to_X00270_5end | ||
|cluster_id=chr9:104187899..104187908,- | |||
|coexpression_cluster_id=C211 | |coexpression_cluster_id=C211 | ||
|description=CAGE_peak_4_at_ALDOB_5end | |description=CAGE_peak_4_at_ALDOB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.71e-07;12 | |ontology_enrichment_celltype_v019=CL:0000182;4.71e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.71e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.46e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;1.46e-07;11 | ||
|ontology_enrichment_disease=DOID:3493!5.60e-07!2 | |ontology_enrichment_disease=DOID:3493!5.60e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.71e-15!27;UBERON:0009854!7.01e-13!23;UBERON:0002108!7.25e-13!14;UBERON:0001154!7.68e-13!1;UBERON:0001153!7.68e-13!1;UBERON:0005409!1.99e-11!35;UBERON:0009856!2.19e-11!26;UBERON:0002107!2.30e-10!19;UBERON:0006925!2.30e-10!19;UBERON:0008836!2.30e-10!19;UBERON:0008835!5.61e-09!22;UBERON:0003894!5.61e-09!22;UBERON:0007499!6.39e-08!25;UBERON:0009497!6.39e-08!25;UBERON:0000015!6.39e-08!25;UBERON:0002423!6.39e-08!25;UBERON:0006235!6.39e-08!25;UBERON:0004161!6.39e-08!25;UBERON:0004921!7.91e-08!129;UBERON:0004185!7.91e-08!129;UBERON:0005057!1.27e-07!26;UBERON:0005172!2.20e-07!55;UBERON:0005173!2.20e-07!55 | |ontology_enrichment_uberon=UBERON:0000160!8.71e-15!27;UBERON:0009854!7.01e-13!23;UBERON:0002108!7.25e-13!14;UBERON:0001154!7.68e-13!1;UBERON:0001153!7.68e-13!1;UBERON:0005409!1.99e-11!35;UBERON:0009856!2.19e-11!26;UBERON:0002107!2.30e-10!19;UBERON:0006925!2.30e-10!19;UBERON:0008836!2.30e-10!19;UBERON:0008835!5.61e-09!22;UBERON:0003894!5.61e-09!22;UBERON:0007499!6.39e-08!25;UBERON:0009497!6.39e-08!25;UBERON:0000015!6.39e-08!25;UBERON:0002423!6.39e-08!25;UBERON:0006235!6.39e-08!25;UBERON:0004161!6.39e-08!25;UBERON:0004921!7.91e-08!129;UBERON:0004185!7.91e-08!129;UBERON:0005057!1.27e-07!26;UBERON:0005172!2.20e-07!55;UBERON:0005173!2.20e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;5.98e-33;4!UBERON:0000160;2.29e-16;17!UBERON:0002107;1.02e-15;19!UBERON:0006925;1.02e-15;19!UBERON:0005409;6.81e-13;22!UBERON:0002423;4.94e-12;25!UBERON:0002365;1.11e-09;31!UBERON:0002330;1.11e-09;31!UBERON:0001007;5.53e-09;81!UBERON:0002368;1.73e-08;33!UBERON:0004921;1.38e-07;33!UBERON:0002114;1.99e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002108;5.98e-33;4!UBERON:0000160;2.29e-16;17!UBERON:0002107;1.02e-15;19!UBERON:0006925;1.02e-15;19!UBERON:0005409;6.81e-13;22!UBERON:0002423;4.94e-12;25!UBERON:0002365;1.11e-09;31!UBERON:0002330;1.11e-09;31!UBERON:0001007;5.53e-09;81!UBERON:0002368;1.73e-08;33!UBERON:0004921;1.38e-07;33!UBERON:0002114;1.99e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.36e-33,4;UBERON:0000160,2.16e-16,17;UBERON:0002107,1.06e-15,19;UBERON:0006925,1.06e-15,19;UBERON:0008836,1.06e-15,19;UBERON:0008835,1.30e-13,22;UBERON:0003894,1.30e-13,22;UBERON:0009854,4.91e-13,23;UBERON:0007499,5.08e-12,25;UBERON:0009497,5.08e-12,25;UBERON:0000015,5.08e-12,25;UBERON:0002423,5.08e-12,25;UBERON:0006235,5.08e-12,25;UBERON:0004161,5.08e-12,25;UBERON:0009856,1.43e-11,26;UBERON:0005409,1.83e-11,25;UBERON:0002365,9.34e-10,31;UBERON:0002330,9.34e-10,31;UBERON:0004921,2.77e-09,118;UBERON:0002368,1.13e-08,35;UBERON:0001007,1.84e-07,145;UBERON:0001555,1.84e-07,145;UBERON:0007026,1.84e-07,145;UBERON:0002114,2.05e-07,2;UBERON:0000949,8.38e-07,45 | |||
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|short_description=p4@ALDOB | |short_description=p4@ALDOB | ||
}} | }} |
Latest revision as of 21:54, 19 September 2015
Short description: | p4@ALDOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALDOB_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -77bp_to_X00270_5end |
EntrezGene: | ALDOB |
HGNC: | 417 |
UniProt: | P05062 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.71e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.36e-33 | 4 |
intestine | 2.16e-16 | 17 |
liver | 1.06e-15 | 19 |
digestive gland | 1.06e-15 | 19 |
liver bud | 1.06e-15 | 19 |
hepatic diverticulum | 1.30e-13 | 22 |
liver primordium | 1.30e-13 | 22 |
digestive tract diverticulum | 4.91e-13 | 23 |
epithelial sac | 5.08e-12 | 25 |
epithelium of foregut-midgut junction | 5.08e-12 | 25 |
anatomical boundary | 5.08e-12 | 25 |
hepatobiliary system | 5.08e-12 | 25 |
foregut-midgut junction | 5.08e-12 | 25 |
septum transversum | 5.08e-12 | 25 |
sac | 1.43e-11 | 26 |
gastrointestinal system | 1.83e-11 | 25 |
exocrine gland | 9.34e-10 | 31 |
exocrine system | 9.34e-10 | 31 |
subdivision of digestive tract | 2.77e-09 | 118 |
endocrine gland | 1.13e-08 | 35 |
digestive system | 1.84e-07 | 145 |
digestive tract | 1.84e-07 | 145 |
primitive gut | 1.84e-07 | 145 |
duodenum | 2.05e-07 | 2 |
endocrine system | 8.38e-07 | 45 |