FFCP PHASE1:Hg19::chr10:64575812..64575824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1959 | |EntrezGene=1959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3239 | |HGNC=3239 | ||
|TSSclassifier=strong | |||
|UniProt=P11161 | |UniProt=P11161 | ||
|association_with_transcript=290bp_to_ENST00000242480_5end | |association_with_transcript=290bp_to_ENST00000242480_5end | ||
|cluster_id=chr10:64575812..64575824,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_4_at_EGR2_5end | |description=CAGE_peak_4_at_EGR2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!9.53e-26!42;CL:0002194!2.68e-25!63;CL:0000576!2.68e-25!63;CL:0000040!2.68e-25!63;CL:0000559!2.68e-25!63;CL:0002009!4.40e-24!65;CL:0000860!3.05e-23!45;CL:0000839!1.37e-22!70;CL:0000557!4.54e-22!71;CL:0000766!9.40e-21!76;CL:0002087!3.90e-16!119;CL:0002031!4.64e-14!124;CL:0000738!1.26e-12!140;CL:0000763!1.79e-10!112;CL:0000049!1.79e-10!112;CL:0000988!2.12e-08!182;CL:0000037!5.16e-08!172;CL:0000566!5.16e-08!172;CL:0002032!5.94e-08!165;CL:0000837!5.94e-08!165 | |ontology_enrichment_celltype=CL:0002057!9.53e-26!42;CL:0002194!2.68e-25!63;CL:0000576!2.68e-25!63;CL:0000040!2.68e-25!63;CL:0000559!2.68e-25!63;CL:0002009!4.40e-24!65;CL:0000860!3.05e-23!45;CL:0000839!1.37e-22!70;CL:0000557!4.54e-22!71;CL:0000766!9.40e-21!76;CL:0002087!3.90e-16!119;CL:0002031!4.64e-14!124;CL:0000738!1.26e-12!140;CL:0000763!1.79e-10!112;CL:0000049!1.79e-10!112;CL:0000988!2.12e-08!182;CL:0000037!5.16e-08!172;CL:0000566!5.16e-08!172;CL:0002032!5.94e-08!165;CL:0000837!5.94e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.99e-73;33!CL:0002057;4.99e-73;33!CL:0000473;1.58e-59;39!CL:0000234;1.58e-59;39!CL:0000576;1.04e-33;48!CL:0000766;1.50e-20;69!CL:0000763;2.18e-11;100!CL:0002087;5.72e-10;104!CL:0000738;8.66e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;4.99e-73;33!CL:0002057;4.99e-73;33!CL:0000473;1.58e-59;39!CL:0000234;1.58e-59;39!CL:0000576;1.04e-33;48!CL:0000766;1.50e-20;69!CL:0000763;2.18e-11;100!CL:0002087;5.72e-10;104!CL:0000738;8.66e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.35e-63,48;CL:0000234,2.35e-63,48;CL:0000860,1.08e-61,42;CL:0002057,1.08e-61,42;CL:0002194,8.15e-58,59;CL:0000576,8.15e-58,59;CL:0000040,8.15e-58,59;CL:0000559,8.15e-58,59;CL:0002009,9.54e-56,61;CL:0000839,4.07e-51,66;CL:0000557,2.84e-50,67;CL:0000766,2.13e-46,72;CL:0002087,8.33e-34,115;CL:0002031,3.96e-32,120;CL:0000763,5.50e-29,108;CL:0000049,5.50e-29,108;CL:0000738,1.39e-27,136;CL:0002032,2.81e-22,161;CL:0000837,2.81e-22,161;CL:0000988,3.33e-21,177;CL:0000037,4.50e-21,168;CL:0000134,2.25e-10,354;CL:0002320,4.99e-10,361;CL:0000219,1.30e-09,386;CL:0000048,5.01e-08,427;CL:0000723,8.26e-08,433;CL:0000034,1.58e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.39e-46;42!CL:0000049;2.57e-10;108 | |ontology_enrichment_development_v019=CL:0002057;7.39e-46;42!CL:0000049;2.57e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.60e-18!102;UBERON:0003061!3.60e-18!102;UBERON:0002371!5.24e-18!80;UBERON:0002193!6.68e-18!112;UBERON:0001474!8.41e-16!86;UBERON:0002405!5.53e-14!115;UBERON:0004765!3.36e-13!101;UBERON:0001434!3.36e-13!101 | |ontology_enrichment_uberon=UBERON:0002390!3.60e-18!102;UBERON:0003061!3.60e-18!102;UBERON:0002371!5.24e-18!80;UBERON:0002193!6.68e-18!112;UBERON:0001474!8.41e-16!86;UBERON:0002405!5.53e-14!115;UBERON:0004765!3.36e-13!101;UBERON:0001434!3.36e-13!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-43,76;UBERON:0001474,4.78e-40,82;UBERON:0004765,5.70e-36,90;UBERON:0002390,4.09e-35,98;UBERON:0003061,4.09e-35,98;UBERON:0002405,1.28e-34,93;UBERON:0001434,2.92e-34,100;UBERON:0002193,2.68e-31,108;UBERON:0002204,1.64e-19,167;UBERON:0003081,3.08e-16,203;UBERON:0000926,1.37e-10,315;UBERON:0004120,1.37e-10,315;UBERON:0006603,1.37e-10,315;UBERON:0002384,1.48e-09,371 | |||
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| ||
|short_description=p4@EGR2 | |short_description=p4@EGR2 | ||
}} | }} |
Latest revision as of 20:02, 18 September 2015
Short description: | p4@EGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EGR2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 290bp_to_ENST00000242480_5end |
EntrezGene: | EGR2 |
HGNC: | 3239 |
UniProt: | P11161 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.35e-63 | 48 |
phagocyte | 2.35e-63 | 48 |
classical monocyte | 1.08e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-61 | 42 |
monopoietic cell | 8.15e-58 | 59 |
monocyte | 8.15e-58 | 59 |
monoblast | 8.15e-58 | 59 |
promonocyte | 8.15e-58 | 59 |
macrophage dendritic cell progenitor | 9.54e-56 | 61 |
myeloid lineage restricted progenitor cell | 4.07e-51 | 66 |
granulocyte monocyte progenitor cell | 2.84e-50 | 67 |
myeloid leukocyte | 2.13e-46 | 72 |
nongranular leukocyte | 8.33e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 3.96e-32 | 120 |
myeloid cell | 5.50e-29 | 108 |
common myeloid progenitor | 5.50e-29 | 108 |
leukocyte | 1.39e-27 | 136 |
hematopoietic oligopotent progenitor cell | 2.81e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-22 | 161 |
hematopoietic cell | 3.33e-21 | 177 |
hematopoietic stem cell | 4.50e-21 | 168 |
mesenchymal cell | 2.25e-10 | 354 |
connective tissue cell | 4.99e-10 | 361 |
motile cell | 1.30e-09 | 386 |
multi fate stem cell | 5.01e-08 | 427 |
somatic stem cell | 8.26e-08 | 433 |
stem cell | 1.58e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-43 | 76 |
bone element | 4.78e-40 | 82 |
skeletal element | 5.70e-36 | 90 |
hematopoietic system | 4.09e-35 | 98 |
blood island | 4.09e-35 | 98 |
immune system | 1.28e-34 | 93 |
skeletal system | 2.92e-34 | 100 |
hemolymphoid system | 2.68e-31 | 108 |
musculoskeletal system | 1.64e-19 | 167 |
lateral plate mesoderm | 3.08e-16 | 203 |
mesoderm | 1.37e-10 | 315 |
mesoderm-derived structure | 1.37e-10 | 315 |
presumptive mesoderm | 1.37e-10 | 315 |
connective tissue | 1.48e-09 | 371 |