FFCP PHASE1:Hg19::chr20:62587735..62587777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54963 | |EntrezGene=54963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15938 | |HGNC=15938 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NWZ5,F8WAC3 | |UniProt=Q9NWZ5,F8WAC3 | ||
|association_with_transcript=0bp_to_ENST00000354216,ENST00000358711,ENST00000369892,uc010gkn.2,uc011abn.1,uc011abo.1_5end | |association_with_transcript=0bp_to_ENST00000354216,ENST00000358711,ENST00000369892,uc010gkn.2,uc011abn.1,uc011abo.1_5end | ||
|cluster_id=chr20:62587735..62587777,- | |||
|description=CAGE_peak_1_at_UCKL1_5end | |description=CAGE_peak_1_at_UCKL1_5end | ||
|id=chr20:62587735..62587777,- | |id=chr20:62587735..62587777,- | ||
|ontology_enrichment_celltype=CL:0000066!1.26e-11!254 | |ontology_enrichment_celltype=CL:0000066!1.26e-11!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.55e-12,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!5.66e-12!143;DOID:162!1.51e-10!235;DOID:305!1.88e-10!106;DOID:14566!4.94e-10!239 | |ontology_enrichment_disease=DOID:0050687!5.66e-12!143;DOID:162!1.51e-10!235;DOID:305!1.88e-10!106;DOID:14566!4.94e-10!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.66e-12,143;DOID:162,1.51e-10,235;DOID:305,1.88e-10,106;DOID:14566,4.94e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0005177!1.43e-11!107;UBERON:0009569!7.49e-11!113;UBERON:0001041!1.12e-08!98;UBERON:0000025!1.13e-08!194;UBERON:0004111!1.76e-08!241;UBERON:0005172!1.85e-08!55;UBERON:0005173!1.85e-08!55;UBERON:0004921!2.24e-08!129;UBERON:0004185!2.24e-08!129;UBERON:0000466!1.50e-07!126;UBERON:0000477!5.03e-07!286;UBERON:0002417!7.67e-07!61;UBERON:0000916!7.67e-07!61;UBERON:0000077!8.00e-07!130;UBERON:0000489!8.02e-07!32 | |ontology_enrichment_uberon=UBERON:0005177!1.43e-11!107;UBERON:0009569!7.49e-11!113;UBERON:0001041!1.12e-08!98;UBERON:0000025!1.13e-08!194;UBERON:0004111!1.76e-08!241;UBERON:0005172!1.85e-08!55;UBERON:0005173!1.85e-08!55;UBERON:0004921!2.24e-08!129;UBERON:0004185!2.24e-08!129;UBERON:0000466!1.50e-07!126;UBERON:0000477!5.03e-07!286;UBERON:0002417!7.67e-07!61;UBERON:0000916!7.67e-07!61;UBERON:0000077!8.00e-07!130;UBERON:0000489!8.02e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.59e-07;30!UBERON:0001008;4.59e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0006554;4.59e-07;30!UBERON:0001008;4.59e-07;30 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,5.73e-13,101;UBERON:0009569,2.56e-11,112;UBERON:0005172,8.30e-09,54;UBERON:0005173,8.30e-09,54;UBERON:0000025,1.29e-08,192;UBERON:0001041,1.56e-08,87;UBERON:0004111,2.20e-08,240;UBERON:0004921,4.10e-08,118;UBERON:0000489,2.99e-07,31;UBERON:0002417,4.07e-07,60;UBERON:0000916,4.07e-07,60 | |||
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|short_description=p1@UCKL1 | |short_description=p1@UCKL1 | ||
}} | }} |
Latest revision as of 14:47, 17 September 2015
Short description: | p1@UCKL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UCKL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354216, ENST00000358711, ENST00000369892, uc010gkn.2, uc011abn.1, uc011abo.1_5end |
EntrezGene: | UCKL1 |
HGNC: | 15938 |
UniProt: | Q9NWZ5F8WAC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.55e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 5.73e-13 | 101 |
subdivision of trunk | 2.56e-11 | 112 |
abdomen element | 8.30e-09 | 54 |
abdominal segment element | 8.30e-09 | 54 |
tube | 1.29e-08 | 192 |
foregut | 1.56e-08 | 87 |
anatomical conduit | 2.20e-08 | 240 |
subdivision of digestive tract | 4.10e-08 | 118 |
cavitated compound organ | 2.99e-07 | 31 |
abdominal segment of trunk | 4.07e-07 | 60 |
abdomen | 4.07e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.66e-12 | 143 |
cancer | 1.51e-10 | 235 |
carcinoma | 1.88e-10 | 106 |
disease of cellular proliferation | 4.94e-10 | 239 |