FFCP PHASE1:Hg19::chr20:42187542..42187573,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:42187542..42187573,-
|short_description=p@chr20:42187542..42187573,-
|description=CAGE_peak_at_chr20:42187542..42187573,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:42187542..42187573,- | |||
|coexpression_cluster_id=C2294 | |||
|description=CAGE_peak_at_chr20:42187542..42187573,- | |||
|id=chr20:42187542..42187573,- | |||
|ontology_enrichment_celltype=CL:0000181!3.52e-22!12;CL:0000417!3.52e-22!12;CL:0000668!3.52e-22!12;CL:0000414!3.52e-22!12;CL:0000412!3.52e-22!12;CL:0000182!3.52e-22!12;CL:0000223!1.37e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.66e-35;12!CL:0002535;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.66e-35,12;CL:0000223,3.26e-10,58;CL:0002535,2.02e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.12e-24;11!UBERON:0009497;5.97e-21;13!UBERON:0001045;1.12e-17;1!UBERON:0001041;2.86e-09;30!UBERON:0003104;6.66e-09;31!CL:0000223;3.09e-07;58 | |||
|ontology_enrichment_disease=DOID:4468!6.03e-11!2;DOID:305!1.00e-10!106;DOID:7!1.05e-09!39;DOID:0050687!4.54e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:7;8.21e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.47e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0009854!1.02e-26!23;UBERON:0009497!3.16e-24!25;UBERON:0000015!3.16e-24!25;UBERON:0002423!3.16e-24!25;UBERON:0006235!3.16e-24!25;UBERON:0004161!3.16e-24!25;UBERON:0009856!2.20e-23!26;UBERON:0008835!4.40e-23!22;UBERON:0003894!4.40e-23!22;UBERON:0007499!4.35e-20!25;UBERON:0002107!1.41e-17!19;UBERON:0006925!1.41e-17!19;UBERON:0008836!1.41e-17!19;UBERON:0004921!5.33e-17!129;UBERON:0004185!5.33e-17!129;UBERON:0005409!5.08e-16!35;UBERON:0001007!1.00e-14!155;UBERON:0001555!1.00e-14!155;UBERON:0007026!1.00e-14!155;UBERON:0003929!2.43e-14!54;UBERON:0000160!3.71e-14!27;UBERON:0005172!7.93e-14!55;UBERON:0005173!7.93e-14!55;UBERON:0004119!4.41e-13!169;UBERON:0000925!4.41e-13!169;UBERON:0006595!4.41e-13!169;UBERON:0005057!1.68e-12!26;UBERON:0002417!3.33e-12!61;UBERON:0000916!3.33e-12!61;UBERON:0002365!2.80e-10!31;UBERON:0002330!2.80e-10!31;UBERON:0005911!5.04e-10!82;UBERON:0000077!1.57e-09!130;UBERON:0002368!5.85e-09!35;UBERON:0000949!1.77e-08!45;UBERON:0005177!4.06e-08!107;UBERON:0000059!4.69e-08!11;UBERON:0001041!6.19e-08!98;UBERON:0002530!1.72e-07!59;UBERON:0002294!3.67e-07!7;UBERON:0001173!3.67e-07!7;UBERON:0004912!3.67e-07!7;UBERON:0001154!6.80e-07!1;UBERON:0001153!6.80e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.01e-22;19!UBERON:0006925;4.01e-22;19!UBERON:0001154;1.12e-17;1!UBERON:0001153;1.12e-17;1!UBERON:0009854;1.12e-17;1!UBERON:0002423;7.56e-17;25!UBERON:0000160;6.23e-15;17!UBERON:0002365;4.19e-13;31!UBERON:0002330;4.19e-13;31!UBERON:0002368;3.80e-12;33!UBERON:0000949;8.12e-12;43!UBERON:0005409;9.22e-12;22!UBERON:0006955;1.64e-09;2!UBERON:0004801;1.64e-09;2!UBERON:0001007;1.60e-08;81!UBERON:0001155;2.70e-08;9!UBERON:0004921;4.77e-07;33!UBERON:0000059;6.07e-07;11!UBERON:0002114;9.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,6.48e-26,23;UBERON:0009856,6.41e-23,26;UBERON:0002107,4.01e-22,19;UBERON:0006925,4.01e-22,19;UBERON:0008836,4.01e-22,19;UBERON:0008835,3.97e-19,22;UBERON:0003894,3.97e-19,22;UBERON:0001154,1.22e-17,1;UBERON:0001153,1.22e-17,1;UBERON:0001045,1.22e-17,1;UBERON:0007499,7.57e-17,25;UBERON:0009497,7.57e-17,25;UBERON:0000015,7.57e-17,25;UBERON:0002423,7.57e-17,25;UBERON:0006235,7.57e-17,25;UBERON:0004161,7.57e-17,25;UBERON:0000160,6.12e-15,17;UBERON:0002365,1.32e-13,31;UBERON:0002330,1.32e-13,31;UBERON:0000949,3.27e-13,45;UBERON:0002368,4.67e-12,35;UBERON:0003929,5.50e-11,54;UBERON:0004921,1.27e-10,118;UBERON:0005409,1.91e-10,25;UBERON:0006955,2.02e-09,2;UBERON:0004801,2.02e-09,2;UBERON:0001007,1.63e-08,145;UBERON:0001555,1.63e-08,145;UBERON:0007026,1.63e-08,145;UBERON:0001155,2.75e-08,9;UBERON:0005172,8.13e-08,54;UBERON:0005173,8.13e-08,54;UBERON:0004119,1.21e-07,160;UBERON:0000925,1.21e-07,160;UBERON:0006595,1.21e-07,160;UBERON:0002530,3.76e-07,59;UBERON:0005911,3.77e-07,82;UBERON:0002417,4.96e-07,60;UBERON:0000916,4.96e-07,60;UBERON:0000059,6.16e-07,11 | |||
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|short_description=p@chr20:42187542..42187573,- | |||
}} | }} |
Latest revision as of 14:06, 28 July 2015
Short description: | p@chr20:42187542..42187573, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:42187542..42187573, - |
Coexpression cluster: | C2294_hepatocellular_small_hepatoblastoma_Hepatocyte_colon_adenocarcinoma_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.66e-35 | 12 |
endodermal cell | 3.26e-10 | 58 |
epithelial cell of cervix | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.47e-07 | 39 |