FFCP PHASE1:Hg19::chr20:4004638..4004661,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4000 | |HGNC=4000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000427242_5end | |association_with_transcript=74bp_to_ENST00000427242_5end | ||
|cluster_id=chr20:4004638..4004661,+ | |||
|coexpression_cluster_id=C467 | |coexpression_cluster_id=C467 | ||
|description=CAGE_peak_3_at_FTLP3_5end | |description=CAGE_peak_3_at_FTLP3_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.10e-17!76;CL:0002194!2.68e-17!63;CL:0000576!2.68e-17!63;CL:0000040!2.68e-17!63;CL:0000559!2.68e-17!63;CL:0002009!4.89e-17!65;CL:0000557!2.67e-16!71;CL:0000839!8.98e-16!70;CL:0002057!1.93e-14!42;CL:0000860!2.16e-13!45;CL:0000048!1.15e-11!430;CL:0000763!4.03e-11!112;CL:0000049!4.03e-11!112;CL:0000723!5.02e-11!436;CL:0000034!1.84e-10!444;CL:0002371!5.15e-10!591;CL:0000144!1.12e-09!625;CL:0000548!2.34e-09!679;CL:0000004!2.34e-09!679;CL:0000255!2.34e-09!679;CL:0000012!5.34e-09!682;CL:0002320!1.72e-08!365;CL:0000134!2.42e-07!358;CL:0000136!6.07e-07!15 | |ontology_enrichment_celltype=CL:0000766!1.10e-17!76;CL:0002194!2.68e-17!63;CL:0000576!2.68e-17!63;CL:0000040!2.68e-17!63;CL:0000559!2.68e-17!63;CL:0002009!4.89e-17!65;CL:0000557!2.67e-16!71;CL:0000839!8.98e-16!70;CL:0002057!1.93e-14!42;CL:0000860!2.16e-13!45;CL:0000048!1.15e-11!430;CL:0000763!4.03e-11!112;CL:0000049!4.03e-11!112;CL:0000723!5.02e-11!436;CL:0000034!1.84e-10!444;CL:0002371!5.15e-10!591;CL:0000144!1.12e-09!625;CL:0000548!2.34e-09!679;CL:0000004!2.34e-09!679;CL:0000255!2.34e-09!679;CL:0000012!5.34e-09!682;CL:0002320!1.72e-08!365;CL:0000134!2.42e-07!358;CL:0000136!6.07e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.17e-19;39!CL:0000234;4.17e-19;39!CL:0000860;6.95e-17;33!CL:0002057;6.95e-17;33!CL:0000576;5.53e-13;48!CL:0000766;2.06e-10;69!CL:0000235;9.62e-09;6!CL:0000136;2.89e-08;13 | |ontology_enrichment_celltype_v019=CL:0000473;4.17e-19;39!CL:0000234;4.17e-19;39!CL:0000860;6.95e-17;33!CL:0002057;6.95e-17;33!CL:0000576;5.53e-13;48!CL:0000766;2.06e-10;69!CL:0000235;9.62e-09;6!CL:0000136;2.89e-08;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.54e-26,59;CL:0000576,1.54e-26,59;CL:0000040,1.54e-26,59;CL:0000559,1.54e-26,59;CL:0000766,4.83e-26,72;CL:0002009,3.81e-25,61;CL:0000473,8.22e-25,48;CL:0000234,8.22e-25,48;CL:0000839,3.11e-24,66;CL:0000557,1.25e-23,67;CL:0000860,1.38e-18,42;CL:0002057,1.38e-18,42;CL:0000763,6.15e-15,108;CL:0000049,6.15e-15,108;CL:0000048,6.91e-13,427;CL:0000723,3.42e-12,433;CL:0000034,1.07e-11,441;CL:0002320,2.36e-11,361;CL:0000134,2.09e-10,354;CL:0000235,1.03e-08,6;CL:0000738,1.14e-08,136;CL:0000136,1.67e-08,15;CL:0000219,2.16e-08,386;CL:0002031,1.60e-07,120;CL:0002087,1.89e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;8.18e-14;42 | |ontology_enrichment_development_v019=CL:0002057;8.18e-14;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.72e-15!167;UBERON:0002371!1.21e-14!80;UBERON:0002405!1.39e-13!115;UBERON:0001474!1.49e-13!86;UBERON:0004765!2.10e-11!101;UBERON:0001434!2.10e-11!101;UBERON:0002390!3.32e-11!102;UBERON:0003061!3.32e-11!102;UBERON:0002193!9.20e-11!112;UBERON:0000926!1.10e-10!448;UBERON:0004120!1.10e-10!448;UBERON:0006603!1.10e-10!448;UBERON:0002384!3.53e-08!375;UBERON:0003081!8.03e-08!216 | |ontology_enrichment_uberon=UBERON:0002204!8.72e-15!167;UBERON:0002371!1.21e-14!80;UBERON:0002405!1.39e-13!115;UBERON:0001474!1.49e-13!86;UBERON:0004765!2.10e-11!101;UBERON:0001434!2.10e-11!101;UBERON:0002390!3.32e-11!102;UBERON:0003061!3.32e-11!102;UBERON:0002193!9.20e-11!112;UBERON:0000926!1.10e-10!448;UBERON:0004120!1.10e-10!448;UBERON:0006603!1.10e-10!448;UBERON:0002384!3.53e-08!375;UBERON:0003081!8.03e-08!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.54e-21,76;UBERON:0001474,1.72e-19,82;UBERON:0002405,6.86e-19,93;UBERON:0004765,3.62e-18,90;UBERON:0001434,2.10e-16,100;UBERON:0002204,2.97e-16,167;UBERON:0002193,1.64e-15,108;UBERON:0002390,2.11e-15,98;UBERON:0003061,2.11e-15,98;UBERON:0002384,1.61e-11,371;UBERON:0000926,1.05e-10,315;UBERON:0004120,1.05e-10,315;UBERON:0006603,1.05e-10,315;UBERON:0003081,3.91e-08,203 | |||
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| ||
|short_description=p3@FTLP3 | |short_description=p3@FTLP3 | ||
}} | }} |
Latest revision as of 06:03, 16 September 2015
Short description: | p3@FTLP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FTLP3_5end |
Coexpression cluster: | C467_CD14_Monocytederived_Mesenchymal_Macrophage_Dendritic_mucinous_liver |
Association with transcript: | 74bp_to_ENST00000427242_5end |
EntrezGene: | NA |
HGNC: | 4000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.54e-26 | 59 |
monocyte | 1.54e-26 | 59 |
monoblast | 1.54e-26 | 59 |
promonocyte | 1.54e-26 | 59 |
myeloid leukocyte | 4.83e-26 | 72 |
macrophage dendritic cell progenitor | 3.81e-25 | 61 |
defensive cell | 8.22e-25 | 48 |
phagocyte | 8.22e-25 | 48 |
myeloid lineage restricted progenitor cell | 3.11e-24 | 66 |
granulocyte monocyte progenitor cell | 1.25e-23 | 67 |
classical monocyte | 1.38e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-18 | 42 |
myeloid cell | 6.15e-15 | 108 |
common myeloid progenitor | 6.15e-15 | 108 |
multi fate stem cell | 6.91e-13 | 427 |
somatic stem cell | 3.42e-12 | 433 |
stem cell | 1.07e-11 | 441 |
connective tissue cell | 2.36e-11 | 361 |
mesenchymal cell | 2.09e-10 | 354 |
macrophage | 1.03e-08 | 6 |
leukocyte | 1.14e-08 | 136 |
fat cell | 1.67e-08 | 15 |
motile cell | 2.16e-08 | 386 |
hematopoietic lineage restricted progenitor cell | 1.60e-07 | 120 |
nongranular leukocyte | 1.89e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-21 | 76 |
bone element | 1.72e-19 | 82 |
immune system | 6.86e-19 | 93 |
skeletal element | 3.62e-18 | 90 |
skeletal system | 2.10e-16 | 100 |
musculoskeletal system | 2.97e-16 | 167 |
hemolymphoid system | 1.64e-15 | 108 |
hematopoietic system | 2.11e-15 | 98 |
blood island | 2.11e-15 | 98 |
connective tissue | 1.61e-11 | 371 |
mesoderm | 1.05e-10 | 315 |
mesoderm-derived structure | 1.05e-10 | 315 |
presumptive mesoderm | 1.05e-10 | 315 |
lateral plate mesoderm | 3.91e-08 | 203 |