FFCP PHASE1:Hg19::chr3:98516175..98516240,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98516175..98516240,- | |||
|coexpression_cluster_id=C2763 | |coexpression_cluster_id=C2763 | ||
|description=CAGE_peak_at_chr3:98516175..98516240,- | |description=CAGE_peak_at_chr3:98516175..98516240,- | ||
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|ontology_enrichment_celltype=CL:0002321!1.07e-13!248;CL:0000220!1.52e-13!246;CL:0000055!2.10e-12!180;CL:0000680!1.70e-10!57;CL:0000056!1.70e-10!57;CL:0000355!1.70e-10!57;CL:0000187!1.22e-09!54;CL:0000066!1.96e-09!254;CL:0000359!4.03e-09!32;CL:0000192!8.06e-09!42;CL:0000514!8.06e-09!42;CL:0000183!5.10e-08!59;CL:0000393!1.58e-07!60;CL:0000211!1.58e-07!60 | |ontology_enrichment_celltype=CL:0002321!1.07e-13!248;CL:0000220!1.52e-13!246;CL:0000055!2.10e-12!180;CL:0000680!1.70e-10!57;CL:0000056!1.70e-10!57;CL:0000355!1.70e-10!57;CL:0000187!1.22e-09!54;CL:0000066!1.96e-09!254;CL:0000359!4.03e-09!32;CL:0000192!8.06e-09!42;CL:0000514!8.06e-09!42;CL:0000183!5.10e-08!59;CL:0000393!1.58e-07!60;CL:0000211!1.58e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.62e-10;32!CL:0002595;9.10e-07;5 | |ontology_enrichment_celltype_v019=CL:0000359;9.62e-10;32!CL:0002595;9.10e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.11e-09,32;CL:0000192,1.20e-07,43;CL:0000514,1.20e-07,43;CL:0000680,1.90e-07,58;CL:0000056,1.90e-07,58;CL:0000355,1.90e-07,58;CL:0002321,2.87e-07,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.87e-11!143;DOID:14566!1.37e-08!239;DOID:162!9.30e-08!235 | |ontology_enrichment_disease=DOID:0050687!2.87e-11!143;DOID:14566!1.37e-08!239;DOID:162!9.30e-08!235 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.90e-11;14!DOID:193;1.67e-10;29!DOID:120;4.14e-10;27!DOID:1115;1.15e-07;20 | |ontology_enrichment_disease_v019=DOID:2394;2.90e-11;14!DOID:193;1.67e-10;29!DOID:120;4.14e-10;27!DOID:1115;1.15e-07;20 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.22e-11,14;DOID:193,1.14e-10,29;DOID:120,2.67e-10,27;DOID:14566,3.98e-09,239;DOID:1115,7.86e-08,20;DOID:162,9.63e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.29e-13!347;UBERON:0000475!8.09e-12!365;UBERON:0003104!1.21e-11!238;UBERON:0009142!1.21e-11!238;UBERON:0000483!1.02e-10!309;UBERON:0002100!2.15e-10!216;UBERON:0005256!2.87e-10!143;UBERON:0001134!3.84e-10!61;UBERON:0002036!3.84e-10!61;UBERON:0003082!3.84e-10!61;UBERON:0000119!3.98e-10!312;UBERON:0002385!1.10e-09!63;UBERON:0001015!1.10e-09!63;UBERON:0000383!1.10e-09!63;UBERON:0004290!3.63e-09!70;UBERON:0000486!5.51e-09!82;UBERON:0000490!5.81e-09!138;UBERON:0003914!1.82e-08!118;UBERON:0000914!5.67e-08!83;UBERON:0002329!5.67e-08!83;UBERON:0003077!5.67e-08!83;UBERON:0003059!5.67e-08!83;UBERON:0007282!5.67e-08!83;UBERON:0009618!5.67e-08!83;UBERON:0007285!5.67e-08!83;UBERON:0001048!1.88e-07!168 | |ontology_enrichment_uberon=UBERON:0000481!3.29e-13!347;UBERON:0000475!8.09e-12!365;UBERON:0003104!1.21e-11!238;UBERON:0009142!1.21e-11!238;UBERON:0000483!1.02e-10!309;UBERON:0002100!2.15e-10!216;UBERON:0005256!2.87e-10!143;UBERON:0001134!3.84e-10!61;UBERON:0002036!3.84e-10!61;UBERON:0003082!3.84e-10!61;UBERON:0000119!3.98e-10!312;UBERON:0002385!1.10e-09!63;UBERON:0001015!1.10e-09!63;UBERON:0000383!1.10e-09!63;UBERON:0004290!3.63e-09!70;UBERON:0000486!5.51e-09!82;UBERON:0000490!5.81e-09!138;UBERON:0003914!1.82e-08!118;UBERON:0000914!5.67e-08!83;UBERON:0002329!5.67e-08!83;UBERON:0003077!5.67e-08!83;UBERON:0003059!5.67e-08!83;UBERON:0007282!5.67e-08!83;UBERON:0009618!5.67e-08!83;UBERON:0007285!5.67e-08!83;UBERON:0001048!1.88e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.75e-08;13!UBERON:0003834;9.10e-07;5!UBERON:0001533;9.10e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000992;1.75e-08;13!UBERON:0003834;9.10e-07;5!UBERON:0001533;9.10e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.02e-08,13;UBERON:0003104,1.89e-08,160;UBERON:0009142,1.89e-08,160;UBERON:0003914,1.24e-07,117;UBERON:0001134,3.07e-07,62;UBERON:0002036,3.07e-07,62;UBERON:0003082,3.07e-07,62;UBERON:0002100,3.78e-07,199;UBERON:0002385,8.18e-07,64;UBERON:0001015,8.18e-07,64;UBERON:0000383,8.18e-07,64 | |||
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| ||
|short_description=p@chr3:98516175..98516240,- | |short_description=p@chr3:98516175..98516240,- | ||
}} | }} |
Latest revision as of 00:06, 30 July 2015
Short description: | p@chr3:98516175..98516240, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98516175..98516240, - |
Coexpression cluster: | C2763_mucinous_glioblastoma_Myoblast_myxofibrosarcoma_fibrous_Smooth_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.11e-09 | 32 |
smooth muscle cell | 1.20e-07 | 43 |
smooth muscle myoblast | 1.20e-07 | 43 |
muscle precursor cell | 1.90e-07 | 58 |
myoblast | 1.90e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.90e-07 | 58 |
embryonic cell | 2.87e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.02e-08 | 13 |
mesenchyme | 1.89e-08 | 160 |
entire embryonic mesenchyme | 1.89e-08 | 160 |
epithelial tube | 1.24e-07 | 117 |
skeletal muscle tissue | 3.07e-07 | 62 |
striated muscle tissue | 3.07e-07 | 62 |
myotome | 3.07e-07 | 62 |
trunk | 3.78e-07 | 199 |
muscle tissue | 8.18e-07 | 64 |
musculature | 8.18e-07 | 64 |
musculature of body | 8.18e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.22e-11 | 14 |
reproductive organ cancer | 1.14e-10 | 29 |
female reproductive organ cancer | 2.67e-10 | 27 |
disease of cellular proliferation | 3.98e-09 | 239 |
sarcoma | 7.86e-08 | 20 |
cancer | 9.63e-08 | 235 |