FFCP PHASE1:Hg19::chr20:57198015..57198031,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:57198015..57198031,+
|short_description=p@chr20:57198015..57198031,+
|description=CAGE_peak_at_chr20:57198015..57198031,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:57198015..57198031,+ | |||
|description=CAGE_peak_at_chr20:57198015..57198031,+ | |||
|id=chr20:57198015..57198031,+ | |||
|ontology_enrichment_celltype=CL:0000062!1.52e-18!11;CL:0000375!1.52e-18!11;CL:0000335!1.52e-18!11;CL:0000055!8.65e-12!180;CL:0000035!3.86e-09!20;CL:0000128!2.72e-07!7;CL:0000126!2.72e-07!7;CL:0000127!2.72e-07!7;CL:0002453!2.72e-07!7;CL:0000243!5.23e-07!15;CL:0000125!5.23e-07!15;CL:0000030!5.23e-07!15;CL:0000339!5.23e-07!15;CL:0002603!6.37e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.42e-11;9!CL:0000228;5.58e-08;1!CL:0002372;5.58e-08;1!CL:0002568;8.01e-08;1!CL:0000222;1.91e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.70e-09,11;CL:0000375,1.70e-09,11;CL:0000335,1.70e-09,11;CL:0000228,5.58e-08,1;CL:0002372,5.58e-08,1;CL:0002568,8.28e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000335;1.72e-09;11 | |||
|ontology_enrichment_disease=DOID:2394!3.37e-14!14;DOID:193!7.86e-12!29;DOID:120!4.03e-11!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.93e-11;14!DOID:120;1.29e-10;27!DOID:193;7.97e-10;29!DOID:3347;4.72e-08;1!DOID:5662;1.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.47e-11,14;DOID:120,9.22e-11,27;DOID:193,5.85e-10,29;DOID:3347,4.89e-08,1;DOID:5662,1.39e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!1.97e-07!5;UBERON:0004532!1.97e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002119;4.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,3.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.816002764977012,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5670016293577,4.37971383272372,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.36669142910475,3.74887975697556,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0.977208552881205,0,0,0,0,0,0,0,0,0,0,5.70547620162874,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,2.27407504055985,0,1.32845119707087,2.39679919104214,0,0,0.343143423810856,0,0,0,0,0,0,0,0.767309866440312,0,0,0,0,0,0,1.06537035187876,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.660075999364704,0,0,0,0.290012154876366,0,0,0.275673144969061,0,0,0,1.78064071293475,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,1.22439575525196,0.824019371133798,0,0,0,0,0.715880777515084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0.627865836814451,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,7.94843162951155,0.993573058514948,0,0,0.561111741760736,0,0,0,0,0,0,0.124252535565433,0,1.49494626680975,2.196659772559,0,4.91216002832582,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,1.19271615249795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.941063278792687,0,0,1.19403842309499,1.16856654923612,0,1.51522404220071,0,0,0,0,1.08806040407946,0.295710299979268,1.75226443880073,0,1.70789252563885,0,3.98762571836992,1.5652351854352,0.150257608997218,0.380805212168795,0.406870733204662,0.909243296012797,1.71856891267982,0.928067519756987,0,0,0.343395705182793,0,1.26184898228651,0,0,0,0,1.389134845943,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,6.21323933454091,0.198916222116275,0,4.63921658018096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82454048461504,5.7332336338646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01837352645104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr20:57198015..57198031,+ | |||
}} | }} |
Latest revision as of 15:47, 28 July 2015
Short description: | p@chr20:57198015..57198031, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:57198015..57198031, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.70e-09 | 11 |
osteoprogenitor cell | 1.70e-09 | 11 |
mesenchyme condensation cell | 1.70e-09 | 11 |
multinucleate cell | 5.58e-08 | 1 |
myotube | 5.58e-08 | 1 |
mesenchymal stem cell of Wharton's jelly | 8.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
left ovary | 3.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.47e-11 | 14 |
female reproductive organ cancer | 9.22e-11 | 27 |
reproductive organ cancer | 5.85e-10 | 29 |
osteosarcoma | 4.89e-08 | 1 |
pleomorphic carcinoma | 1.39e-07 | 1 |