FFCP PHASE1:Hg19::chr2:216235036..216235163,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_ENST00000480024_5end | |association_with_transcript=79bp_to_ENST00000480024_5end | ||
|cluster_id=chr2:216235036..216235163,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_26_at_FN1_5end | |description=CAGE_peak_26_at_FN1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.69e-34!180;CL:0000057!1.94e-22!75;CL:0000680!1.87e-16!57;CL:0000056!1.87e-16!57;CL:0000355!1.87e-16!57;CL:0000183!9.78e-16!59;CL:0000187!3.69e-15!54;CL:0002371!5.13e-14!591;CL:0000393!1.21e-12!60;CL:0000211!1.21e-12!60;CL:0000220!3.90e-12!246;CL:0002321!8.10e-12!248;CL:0000144!2.33e-11!625;CL:0000222!4.84e-11!119;CL:0000192!7.30e-11!42;CL:0000514!7.30e-11!42;CL:0000359!1.11e-09!32;CL:0002620!2.48e-09!23;CL:0002494!2.09e-08!16;CL:0000048!2.72e-08!430;CL:0000723!4.56e-08!436;CL:0000034!1.88e-07!444;CL:0000548!6.96e-07!679;CL:0000004!6.96e-07!679;CL:0000255!6.96e-07!679;CL:0002334!8.49e-07!12 | |ontology_enrichment_celltype=CL:0000055!3.69e-34!180;CL:0000057!1.94e-22!75;CL:0000680!1.87e-16!57;CL:0000056!1.87e-16!57;CL:0000355!1.87e-16!57;CL:0000183!9.78e-16!59;CL:0000187!3.69e-15!54;CL:0002371!5.13e-14!591;CL:0000393!1.21e-12!60;CL:0000211!1.21e-12!60;CL:0000220!3.90e-12!246;CL:0002321!8.10e-12!248;CL:0000144!2.33e-11!625;CL:0000222!4.84e-11!119;CL:0000192!7.30e-11!42;CL:0000514!7.30e-11!42;CL:0000359!1.11e-09!32;CL:0002620!2.48e-09!23;CL:0002494!2.09e-08!16;CL:0000048!2.72e-08!430;CL:0000723!4.56e-08!436;CL:0000034!1.88e-07!444;CL:0000548!6.96e-07!679;CL:0000004!6.96e-07!679;CL:0000255!6.96e-07!679;CL:0002334!8.49e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000134;2.39e-12;55!CL:0000723;3.25e-11;61!CL:0002620;1.86e-10;23!CL:0000359;1.97e-10;32!CL:0000048;2.53e-10;58!CL:0000187;1.30e-09;55!CL:0000057;1.44e-09;73!CL:0002494;1.93e-09;16!CL:0002320;4.24e-09;188!CL:0000192;1.08e-08;43!CL:0000034;1.78e-08;69!CL:0000349;3.30e-08;19!CL:0000393;8.66e-08;61!CL:0000211;8.66e-08;61!CL:0002334;1.66e-07;12!CL:0000499;7.34e-07;28 | |ontology_enrichment_celltype_v019=CL:0000134;2.39e-12;55!CL:0000723;3.25e-11;61!CL:0002620;1.86e-10;23!CL:0000359;1.97e-10;32!CL:0000048;2.53e-10;58!CL:0000187;1.30e-09;55!CL:0000057;1.44e-09;73!CL:0002494;1.93e-09;16!CL:0002320;4.24e-09;188!CL:0000192;1.08e-08;43!CL:0000034;1.78e-08;69!CL:0000349;3.30e-08;19!CL:0000393;8.66e-08;61!CL:0000211;8.66e-08;61!CL:0002334;1.66e-07;12!CL:0000499;7.34e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.98e-24,76;CL:0000048,1.14e-18,427;CL:0000680,2.25e-18,58;CL:0000056,2.25e-18,58;CL:0000355,2.25e-18,58;CL:0000723,4.40e-18,433;CL:0000187,6.84e-17,55;CL:0000034,8.72e-17,441;CL:0000393,2.19e-13,61;CL:0000211,2.19e-13,61;CL:0000192,5.67e-12,43;CL:0000514,5.67e-12,43;CL:0000359,6.35e-11,32;CL:0002620,1.61e-10,23;CL:0002494,1.87e-09,16;CL:0000222,5.93e-09,121;CL:0000349,2.93e-08,19;CL:0002321,3.90e-08,250;CL:0002320,5.50e-08,361;CL:0002334,1.33e-07,12;CL:0000499,8.64e-07,28;CL:0000134,9.01e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000355;7.05e-10;58!CL:0000514;1.08e-08;43 | |ontology_enrichment_development_v019=CL:0000355;7.05e-10;58!CL:0000514;1.08e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.94e-19!83;UBERON:0002329!1.94e-19!83;UBERON:0003077!1.94e-19!83;UBERON:0003059!1.94e-19!83;UBERON:0007282!1.94e-19!83;UBERON:0009618!1.94e-19!83;UBERON:0007285!1.94e-19!83;UBERON:0004290!6.70e-18!70;UBERON:0005256!8.14e-18!143;UBERON:0000486!8.70e-16!82;UBERON:0001134!2.33e-15!61;UBERON:0002036!2.33e-15!61;UBERON:0003082!2.33e-15!61;UBERON:0002385!9.44e-15!63;UBERON:0001015!9.44e-15!63;UBERON:0000383!9.44e-15!63;UBERON:0003914!1.74e-14!118;UBERON:0004872!2.90e-14!84;UBERON:0002049!4.58e-14!79;UBERON:0007798!4.58e-14!79;UBERON:0000490!1.01e-13!138;UBERON:0002100!6.10e-13!216;UBERON:0004535!1.20e-11!110;UBERON:0001009!1.54e-11!113;UBERON:0001637!2.01e-11!42;UBERON:0003509!2.01e-11!42;UBERON:0004572!2.01e-11!42;UBERON:0000055!3.94e-11!69;UBERON:0000468!1.15e-10!659;UBERON:0001981!1.71e-10!60;UBERON:0007500!1.71e-10!60;UBERON:0004537!1.71e-10!60;UBERON:0006965!1.71e-10!60;UBERON:0003104!1.04e-09!238;UBERON:0009142!1.04e-09!238;UBERON:0004573!2.37e-09!33;UBERON:0004571!2.37e-09!33;UBERON:0000475!4.06e-09!365;UBERON:0003102!5.00e-09!95;UBERON:0002199!5.29e-09!45;UBERON:0002416!5.29e-09!45;UBERON:0000948!2.95e-08!24;UBERON:0005498!2.95e-08!24;UBERON:0004140!2.95e-08!24;UBERON:0009881!2.95e-08!24;UBERON:0004141!2.95e-08!24;UBERON:0003084!2.95e-08!24;UBERON:0007005!2.95e-08!24;UBERON:0004139!2.95e-08!24;UBERON:0004291!2.95e-08!24;UBERON:0002097!6.55e-08!40;UBERON:0004923!9.67e-08!57;UBERON:0007100!1.00e-07!27;UBERON:0000926!1.13e-07!448;UBERON:0004120!1.13e-07!448;UBERON:0006603!1.13e-07!448;UBERON:0000119!1.36e-07!312;UBERON:0000483!2.41e-07!309;UBERON:0000467!2.75e-07!625;UBERON:0000480!3.95e-07!626;UBERON:0000481!6.46e-07!347;UBERON:0000947!6.56e-07!21;UBERON:0010191!6.56e-07!21 | |ontology_enrichment_uberon=UBERON:0000914!1.94e-19!83;UBERON:0002329!1.94e-19!83;UBERON:0003077!1.94e-19!83;UBERON:0003059!1.94e-19!83;UBERON:0007282!1.94e-19!83;UBERON:0009618!1.94e-19!83;UBERON:0007285!1.94e-19!83;UBERON:0004290!6.70e-18!70;UBERON:0005256!8.14e-18!143;UBERON:0000486!8.70e-16!82;UBERON:0001134!2.33e-15!61;UBERON:0002036!2.33e-15!61;UBERON:0003082!2.33e-15!61;UBERON:0002385!9.44e-15!63;UBERON:0001015!9.44e-15!63;UBERON:0000383!9.44e-15!63;UBERON:0003914!1.74e-14!118;UBERON:0004872!2.90e-14!84;UBERON:0002049!4.58e-14!79;UBERON:0007798!4.58e-14!79;UBERON:0000490!1.01e-13!138;UBERON:0002100!6.10e-13!216;UBERON:0004535!1.20e-11!110;UBERON:0001009!1.54e-11!113;UBERON:0001637!2.01e-11!42;UBERON:0003509!2.01e-11!42;UBERON:0004572!2.01e-11!42;UBERON:0000055!3.94e-11!69;UBERON:0000468!1.15e-10!659;UBERON:0001981!1.71e-10!60;UBERON:0007500!1.71e-10!60;UBERON:0004537!1.71e-10!60;UBERON:0006965!1.71e-10!60;UBERON:0003104!1.04e-09!238;UBERON:0009142!1.04e-09!238;UBERON:0004573!2.37e-09!33;UBERON:0004571!2.37e-09!33;UBERON:0000475!4.06e-09!365;UBERON:0003102!5.00e-09!95;UBERON:0002199!5.29e-09!45;UBERON:0002416!5.29e-09!45;UBERON:0000948!2.95e-08!24;UBERON:0005498!2.95e-08!24;UBERON:0004140!2.95e-08!24;UBERON:0009881!2.95e-08!24;UBERON:0004141!2.95e-08!24;UBERON:0003084!2.95e-08!24;UBERON:0007005!2.95e-08!24;UBERON:0004139!2.95e-08!24;UBERON:0004291!2.95e-08!24;UBERON:0002097!6.55e-08!40;UBERON:0004923!9.67e-08!57;UBERON:0007100!1.00e-07!27;UBERON:0000926!1.13e-07!448;UBERON:0004120!1.13e-07!448;UBERON:0006603!1.13e-07!448;UBERON:0000119!1.36e-07!312;UBERON:0000483!2.41e-07!309;UBERON:0000467!2.75e-07!625;UBERON:0000480!3.95e-07!626;UBERON:0000481!6.46e-07!347;UBERON:0000947!6.56e-07!21;UBERON:0010191!6.56e-07!21 | ||
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| ||
|short_description=p26@FN1 | |short_description=p26@FN1 | ||
}} | }} |
Latest revision as of 01:53, 20 September 2015
Short description: | p26@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 79bp_to_ENST00000480024_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.98e-24 | 76 |
multi fate stem cell | 1.14e-18 | 427 |
muscle precursor cell | 2.25e-18 | 58 |
myoblast | 2.25e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.25e-18 | 58 |
somatic stem cell | 4.40e-18 | 433 |
muscle cell | 6.84e-17 | 55 |
stem cell | 8.72e-17 | 441 |
electrically responsive cell | 2.19e-13 | 61 |
electrically active cell | 2.19e-13 | 61 |
smooth muscle cell | 5.67e-12 | 43 |
smooth muscle myoblast | 5.67e-12 | 43 |
vascular associated smooth muscle cell | 6.35e-11 | 32 |
skin fibroblast | 1.61e-10 | 23 |
cardiocyte | 1.87e-09 | 16 |
mesodermal cell | 5.93e-09 | 121 |
extraembryonic cell | 2.93e-08 | 19 |
embryonic cell | 3.90e-08 | 250 |
connective tissue cell | 5.50e-08 | 361 |
preadipocyte | 1.33e-07 | 12 |
stromal cell | 8.64e-07 | 28 |
mesenchymal cell | 9.01e-07 | 354 |