FFCP PHASE1:Hg19::chr14:73712669..73712737,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000554614,uc001xnx.2_5end | |association_with_transcript=0bp_to_ENST00000554614,uc001xnx.2_5end | ||
|cluster_id=chr14:73712669..73712737,- | |||
|description=CAGE_peak_1_at_ENST00000554614_5end,CAGE_peak_1_at_uc001xnx.2_5end | |description=CAGE_peak_1_at_ENST00000554614_5end,CAGE_peak_1_at_uc001xnx.2_5end | ||
|id=chr14:73712669..73712737,- | |id=chr14:73712669..73712737,- | ||
|ontology_enrichment_celltype=CL:0002371!6.18e-19!591;CL:0000055!1.14e-16!180;CL:0000144!6.83e-16!625;CL:0000115!4.35e-12!35;CL:0000183!1.75e-11!59;CL:0000222!3.46e-11!119;CL:0000187!4.29e-10!54;CL:0000680!6.21e-10!57;CL:0000056!6.21e-10!57;CL:0000355!6.21e-10!57;CL:0002078!8.47e-10!44;CL:0000548!1.36e-09!679;CL:0000004!1.36e-09!679;CL:0000255!1.36e-09!679;CL:0000012!2.48e-09!682;CL:0000393!1.28e-08!60;CL:0000211!1.28e-08!60;CL:0002321!4.27e-08!248;CL:0000220!1.03e-07!246;CL:1000449!1.35e-07!16;CL:0002139!1.95e-07!24;CL:0000071!5.18e-07!18;CL:0002546!5.18e-07!18 | |ontology_enrichment_celltype=CL:0002371!6.18e-19!591;CL:0000055!1.14e-16!180;CL:0000144!6.83e-16!625;CL:0000115!4.35e-12!35;CL:0000183!1.75e-11!59;CL:0000222!3.46e-11!119;CL:0000187!4.29e-10!54;CL:0000680!6.21e-10!57;CL:0000056!6.21e-10!57;CL:0000355!6.21e-10!57;CL:0002078!8.47e-10!44;CL:0000548!1.36e-09!679;CL:0000004!1.36e-09!679;CL:0000255!1.36e-09!679;CL:0000012!2.48e-09!682;CL:0000393!1.28e-08!60;CL:0000211!1.28e-08!60;CL:0002321!4.27e-08!248;CL:0000220!1.03e-07!246;CL:1000449!1.35e-07!16;CL:0002139!1.95e-07!24;CL:0000071!5.18e-07!18;CL:0002546!5.18e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.04e-11;36!CL:1000449;2.73e-09;15!CL:1000497;1.45e-07;17!CL:0002518;1.45e-07;17!CL:0002681;4.06e-07;12!CL:0002584;4.06e-07;12!CL:0002139;8.69e-07;24 | |ontology_enrichment_celltype_v019=CL:0000115;4.04e-11;36!CL:1000449;2.73e-09;15!CL:1000497;1.45e-07;17!CL:0002518;1.45e-07;17!CL:0002681;4.06e-07;12!CL:0002584;4.06e-07;12!CL:0002139;8.69e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.21e-13,36;CL:0000222,2.40e-12,121;CL:0002321,2.53e-12,250;CL:0002078,1.36e-10,45;CL:1000449,3.73e-09,15;CL:0000187,1.13e-08,55;CL:0000680,4.57e-08,58;CL:0000056,4.57e-08,58;CL:0000355,4.57e-08,58;CL:1000497,1.87e-07,17;CL:0002518,1.87e-07,17;CL:0000393,3.97e-07,61;CL:0000211,3.97e-07,61;CL:0002681,5.26e-07,12;CL:0002584,5.26e-07,12;CL:0000071,7.81e-07,18;CL:0002546,7.81e-07,18;CL:0002139,8.79e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.27e-10!110;UBERON:0002049!3.36e-10!79;UBERON:0007798!3.36e-10!79;UBERON:0000486!6.41e-10!82;UBERON:0000055!8.72e-10!69;UBERON:0004872!9.14e-10!84;UBERON:0000914!9.76e-10!83;UBERON:0002329!9.76e-10!83;UBERON:0003077!9.76e-10!83;UBERON:0003059!9.76e-10!83;UBERON:0007282!9.76e-10!83;UBERON:0009618!9.76e-10!83;UBERON:0007285!9.76e-10!83;UBERON:0001009!1.39e-09!113;UBERON:0003081!2.33e-09!216;UBERON:0003914!2.75e-09!118;UBERON:0001134!6.99e-09!61;UBERON:0002036!6.99e-09!61;UBERON:0003082!6.99e-09!61;UBERON:0001981!1.10e-08!60;UBERON:0007500!1.10e-08!60;UBERON:0004537!1.10e-08!60;UBERON:0006965!1.10e-08!60;UBERON:0002385!1.22e-08!63;UBERON:0001015!1.22e-08!63;UBERON:0000383!1.22e-08!63;UBERON:0005256!1.98e-08!143;UBERON:0000926!3.18e-08!448;UBERON:0004120!3.18e-08!448;UBERON:0006603!3.18e-08!448;UBERON:0002204!3.90e-08!167;UBERON:0004290!6.36e-08!70;UBERON:0004211!1.35e-07!16;UBERON:0001285!1.35e-07!16;UBERON:0007684!1.35e-07!16;UBERON:0003220!1.35e-07!16;UBERON:0004208!1.35e-07!16;UBERON:0000490!1.73e-07!138;UBERON:0002100!4.34e-07!216;UBERON:0000922!4.93e-07!612;UBERON:0006555!5.05e-07!17;UBERON:0005103!5.05e-07!17;UBERON:0000083!5.05e-07!17;UBERON:0009201!5.05e-07!17;UBERON:0004819!5.05e-07!17;UBERON:0006553!5.05e-07!17;UBERON:0003074!5.05e-07!17;UBERON:0003060!5.05e-07!17;UBERON:0001986!5.18e-07!18;UBERON:0004638!5.18e-07!18;UBERON:0004852!5.18e-07!18 | |ontology_enrichment_uberon=UBERON:0004535!3.27e-10!110;UBERON:0002049!3.36e-10!79;UBERON:0007798!3.36e-10!79;UBERON:0000486!6.41e-10!82;UBERON:0000055!8.72e-10!69;UBERON:0004872!9.14e-10!84;UBERON:0000914!9.76e-10!83;UBERON:0002329!9.76e-10!83;UBERON:0003077!9.76e-10!83;UBERON:0003059!9.76e-10!83;UBERON:0007282!9.76e-10!83;UBERON:0009618!9.76e-10!83;UBERON:0007285!9.76e-10!83;UBERON:0001009!1.39e-09!113;UBERON:0003081!2.33e-09!216;UBERON:0003914!2.75e-09!118;UBERON:0001134!6.99e-09!61;UBERON:0002036!6.99e-09!61;UBERON:0003082!6.99e-09!61;UBERON:0001981!1.10e-08!60;UBERON:0007500!1.10e-08!60;UBERON:0004537!1.10e-08!60;UBERON:0006965!1.10e-08!60;UBERON:0002385!1.22e-08!63;UBERON:0001015!1.22e-08!63;UBERON:0000383!1.22e-08!63;UBERON:0005256!1.98e-08!143;UBERON:0000926!3.18e-08!448;UBERON:0004120!3.18e-08!448;UBERON:0006603!3.18e-08!448;UBERON:0002204!3.90e-08!167;UBERON:0004290!6.36e-08!70;UBERON:0004211!1.35e-07!16;UBERON:0001285!1.35e-07!16;UBERON:0007684!1.35e-07!16;UBERON:0003220!1.35e-07!16;UBERON:0004208!1.35e-07!16;UBERON:0000490!1.73e-07!138;UBERON:0002100!4.34e-07!216;UBERON:0000922!4.93e-07!612;UBERON:0006555!5.05e-07!17;UBERON:0005103!5.05e-07!17;UBERON:0000083!5.05e-07!17;UBERON:0009201!5.05e-07!17;UBERON:0004819!5.05e-07!17;UBERON:0006553!5.05e-07!17;UBERON:0003074!5.05e-07!17;UBERON:0003060!5.05e-07!17;UBERON:0001986!5.18e-07!18;UBERON:0004638!5.18e-07!18;UBERON:0004852!5.18e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.73e-09;15!UBERON:0004819;2.73e-09;15!UBERON:0001285;2.73e-09;15!UBERON:0007684;2.73e-09;15!UBERON:0000353;1.13e-07;15!UBERON:0003914;3.80e-07;74!UBERON:0001225;4.06e-07;12!UBERON:0008987;4.06e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0006555;2.73e-09;15!UBERON:0004819;2.73e-09;15!UBERON:0001285;2.73e-09;15!UBERON:0007684;2.73e-09;15!UBERON:0000353;1.13e-07;15!UBERON:0003914;3.80e-07;74!UBERON:0001225;4.06e-07;12!UBERON:0008987;4.06e-07;12 | ||
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|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,1.04474251279935,1.96587149201207,4.18680700783456,3.27662058195258,3.16520373874144,5.5694858832021,2.31978163009541,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,1.02000345622126,0.940364164434263,1.43117993565528,2.73748850145768,1.12988375635323,0.764134057479513,0.328402357799783,0.472264687882075,0.393364276848904,0.383829398097213,0.309632246632152,3.67768489791571,2.409647350226,2.58827807116751,0,0,1.17440175733939,0,0,0.217010870715852,1.56740831967947,1.6194683300949,1.28787783817093,0.726991193897824,1.51150377475524,1.94067248950253,1.85943229524548,1.6446715520873,0.619412741790207,0,0.256160706529101,0.47296445977717,0,0,0,1.31769637679823,1.36453075028923,1.12361742222542,0.918251677112708,1.92557416245656,0.639337125799041,0.329851300186716,0.398927315243264,0,0.870627715885752,0.56738522469114,0,0.251248665256743,0,0.434377689410233,1.81619850790011,0,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,2.3589012540764,0.901061357049038,0.64290234678832,0,0.19891667719909,0.182664153764634,3.51992488922645,0.546138611262131,1.77901850772711,0,0.800791974072025,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0.95569624297229,0,0,0.150575119077773,0,0,0,0,0,0,0,7.31420598941885,4.69490601792545,2.17366355134002,1.0843174571537,1.50401373190767,3.18662341713812,0.795285947051099,0,0.378139268656271,0.221729397462564,0.263504357079378,0.392937226493138,9.83597278389864,5.93255108455087,0.324547393654683,1.39303789839414,2.12732736830184,24.5645343034502,24.0237862527654,26.3734825943991,3.57772333260069,0.860234595106124,0.694281003215189,1.13061588384802,3.35599548967925,1.6507082516404,3.9709043641994,0.258416759169329,1.06729878806013,2.34304428935269,1.61131726843659,0.760272105718513,2.68468263302986,2.20597848207521,5.67099363517232,2.50039239195423,4.04152870727106,2.81528701208306,4.5994991239765,3.79706263827252,3.11442964681692,0,0,2.61656431285521,0.993943903390637,1.51956613997496,0.794455084879313,0.860509862246441,2.12801029319014,1.12135520028461,1.06748995729705,1.48000529050296,2.8008993185979,1.75123873690594,4.25000948094993,0.302714855289863,1.15235184896,3.04617861383936,1.24864030732128,1.71141546463335,1.19558944441441,0.939475989150119,0.971237666208789,0.421352420106746,2.04154171254893,1.47401180774122,3.92637968467909,7.12801714369232,3.21447008062124,1.82032272387605,1.43723628363248,3.19838616512726,1.25118519871964,0.554128230968366,1.75591048352335,1.5324389789951,3.00476117813194,2.04177929688038,0.179389635688862,0.427114777637135,0.847727604638247,2.40072876867522,3.91599611106068,0.257640540045629,0.37223371266318,0,0.194874010322397,0.504867548488229,0.736399189138395,1.77810662500693,0.355009592516614,0.503760491138201,1.52604533079439,1.73934767846967,5.18217629122586,2.00763216772303,2.31750041646231,2.12047629314376,1.74290914304278,1.7622379352613,1.7662459561294,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,3.69077727312324,8.41450642820675,1.6462960453256,1.47008711385542,0,0,0,0,0,0.343135620597051,1.42675371031213,0,1.00528972411631,4.44424536760942,4.23550796903422,2.07986957055916,1.44331342025273,1.73895607462615,0.821860859650752,1.58803092537181,0.925971025153221,2.28304982681518,0,0,2.46217006087397,4.21207677250628,2.67536092119711,3.74935335947108,0,2.41017665312057,1.07470227243418,1.45316969256981,4.98397482914775,0,0.44024217006613,0,0.144119953416961,0,1.52394946301206,4.20187268114105,4.68869788840188,6.84289784090821,3.80461723002297,1.8020583470635,1.71495859578347,0.897048674762886,0,0.66004457238855,0.904902010304444,14.3062578340753,0.845302752556,0,0,4.11531798819427,2.83698264046557,4.26275486425759,1.28680194292333,4.88359444852299,6.58592269424615,1.30294473717494,1.42156779497018,3.95975936466715,1.20575750823834,0,1.3996218765488,2.43247561282381,1.00451418286425,0,1.19812427745791,0,1.42636905040718,0.434343920002738,0.61642896765115,1.07436577943937,0,0,0.215627574859517,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,3.80343624329334,4.00136416847742,2.44138521329762,0.207970861530807,0.535286966391485,0,0.35142424497814,2.70851489754947,6.82222512167955,2.0694614258501,0.664225598535437,1.10621501125022,2.86715927744673,1.56640925970192,1.02943027143257,0.82707210449155,0.431428401637234,0.74709290462411,0,0,2.11673205330776,0.496215615637554,0.460385919864187,1.40330047216537,0.128139149255701,1.53512174720011,0,0,2.31314540703983,1.59805552781814,0.328508624055237,5.19254429183621,1.85936605535935,0,3.40860999515584,0.460404944679482,1.14814448164607,2.54927635209404,4.72047893853927,3.60959690325929,4.31285887784723,8.62784746094541,4.38417673959782,3.27210049567915,5.68666920354483,4.08224892663638,2.5909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| ||
|short_description=p1@ENST00000554614,p1@uc001xnx.2 | |short_description=p1@ENST00000554614,p1@uc001xnx.2 | ||
}} | }} |
Latest revision as of 22:33, 24 July 2015
Short description: | p1@ENST00000554614, p1@uc001xnx.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000554614_5end, CAGE_peak_1_at_uc001xnx.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000554614, uc001xnx.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.21e-13 | 36 |
mesodermal cell | 2.40e-12 | 121 |
embryonic cell | 2.53e-12 | 250 |
meso-epithelial cell | 1.36e-10 | 45 |
epithelial cell of nephron | 3.73e-09 | 15 |
muscle cell | 1.13e-08 | 55 |
muscle precursor cell | 4.57e-08 | 58 |
myoblast | 4.57e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.57e-08 | 58 |
kidney cell | 1.87e-07 | 17 |
kidney epithelial cell | 1.87e-07 | 17 |
electrically responsive cell | 3.97e-07 | 61 |
electrically active cell | 3.97e-07 | 61 |
kidney cortical cell | 5.26e-07 | 12 |
renal cortical epithelial cell | 5.26e-07 | 12 |
blood vessel endothelial cell | 7.81e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.81e-07 | 18 |
endothelial cell of vascular tree | 8.79e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.88e-10 | 117 |
nephron epithelium | 3.73e-09 | 15 |
renal tubule | 3.73e-09 | 15 |
nephron tubule | 3.73e-09 | 15 |
nephron | 3.73e-09 | 15 |
uriniferous tubule | 3.73e-09 | 15 |
nephrogenic mesenchyme | 3.73e-09 | 15 |
epithelial vesicle | 1.91e-08 | 78 |
excretory tube | 3.02e-08 | 16 |
kidney epithelium | 3.02e-08 | 16 |
mesenchyme | 4.90e-08 | 160 |
entire embryonic mesenchyme | 4.90e-08 | 160 |
multilaminar epithelium | 5.96e-08 | 83 |
unilaminar epithelium | 1.15e-07 | 148 |
vasculature | 1.22e-07 | 78 |
vascular system | 1.22e-07 | 78 |
parenchyma | 1.40e-07 | 15 |
vessel | 1.85e-07 | 68 |
splanchnic layer of lateral plate mesoderm | 1.93e-07 | 83 |
musculoskeletal system | 2.34e-07 | 167 |
cortex of kidney | 5.26e-07 | 12 |
renal parenchyma | 5.26e-07 | 12 |
epithelium | 5.29e-07 | 306 |
epithelial tube open at both ends | 6.27e-07 | 59 |
blood vessel | 6.27e-07 | 59 |
blood vasculature | 6.27e-07 | 59 |
vascular cord | 6.27e-07 | 59 |
blood vessel endothelium | 7.81e-07 | 18 |
endothelium | 7.81e-07 | 18 |
cardiovascular system endothelium | 7.81e-07 | 18 |
skeletal muscle tissue | 7.95e-07 | 62 |
striated muscle tissue | 7.95e-07 | 62 |
myotome | 7.95e-07 | 62 |