FFCP PHASE1:Hg19::chr2:176994111..176994122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3234 | |EntrezGene=3234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5139 | |HGNC=5139 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBG7 | |UniProt=F8WBG7 | ||
|association_with_transcript=-299bp_to_ENST00000429017,NM_001199747,uc002ukn.2_5end | |association_with_transcript=-299bp_to_ENST00000429017,NM_001199747,uc002ukn.2_5end | ||
|cluster_id=chr2:176994111..176994122,+ | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_10_at_HOXD8_5end | |description=CAGE_peak_10_at_HOXD8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000507!4.36e-13!12;CL:1000494!4.36e-13!12;CL:1000449!5.72e-10!16;CL:1000497!6.33e-09!18;CL:0002518!6.33e-09!18;CL:0000346!6.50e-07!3;CL:1000428!6.50e-07!3;CL:0000650!6.88e-07!3;CL:1000618!6.88e-07!3;CL:1001318!6.88e-07!3;CL:0002173!6.88e-07!3;CL:1000500!6.88e-07!3 | |ontology_enrichment_celltype=CL:1000507!4.36e-13!12;CL:1000494!4.36e-13!12;CL:1000449!5.72e-10!16;CL:1000497!6.33e-09!18;CL:0002518!6.33e-09!18;CL:0000346!6.50e-07!3;CL:1000428!6.50e-07!3;CL:0000650!6.88e-07!3;CL:1000618!6.88e-07!3;CL:1001318!6.88e-07!3;CL:0002173!6.88e-07!3;CL:1000500!6.88e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.00e-40;10!UBERON:0007687;2.00e-40;10!UBERON:0003104;1.90e-14;31 | |ontology_enrichment_development_v019=UBERON:0003918;2.00e-40;10!UBERON:0007687;2.00e-40;10!UBERON:0003104;1.90e-14;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002113;1.03e-17;24!UBERON:0011143;1.03e-17;24!UBERON:0000489;6.74e-15;29!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0005172;1.47e-07;52!UBERON:0005173;1.47e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002113;1.03e-17;24!UBERON:0011143;1.03e-17;24!UBERON:0000489;6.74e-15;29!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0005172;1.47e-07;52!UBERON:0005173;1.47e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0006554,1.08e-09,47;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p10@HOXD8 | |short_description=p10@HOXD8 | ||
}} | }} |
Latest revision as of 09:09, 18 September 2015
Short description: | p10@HOXD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HOXD8_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | -299bp_to_ENST00000429017, NM_001199747, uc002ukn.2_5end |
EntrezGene: | HOXD8 |
HGNC: | 5139 |
UniProt: | F8WBG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
urinary system structure | 1.08e-09 | 47 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
compound organ | 4.47e-07 | 68 |